Information for 23-CATCAGTTAAGG (Motif 26)


Reverse Opposite:

p-value:1e-68
log p-value:-1.576e+02
Information Content per bp:1.933
Number of Target Sequences with motif254.0
Percentage of Target Sequences with motif0.44%
Number of Background Sequences with motif65.2
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets634.7 +/- 666.0bp
Average Position of motif in Background369.2 +/- 234.8bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.48
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0041.1_Hmx1/Jaspar

Match Rank:1
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CATCAGTTAAGG---
ACAAGCAATTAATGAAT

PH0043.1_Hmx3/Jaspar

Match Rank:2
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CATCAGTTAAGG---
ACAAGCAATTAAAGAAT

Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:3
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CATCAGTTAAGG
TAATCAATTA---

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:4
Score:0.62
Offset:3
Orientation:forward strand
Alignment:CATCAGTTAAGG-
---CAGATAAGGN

PH0042.1_Hmx2/Jaspar

Match Rank:5
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CATCAGTTAAGG---
ACAAGCAATTAAAGAAT

PH0088.1_Isl2/Jaspar

Match Rank:6
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CATCAGTTAAGG-
CAAAATCAATTAATTT

PH0006.1_Barhl2/Jaspar

Match Rank:7
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CATCAGTTAAGG-
AAAAACCAATTAAGAA

MA0070.1_PBX1/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CATCAGTTAAGG
CCATCAATCAAA-

PH0134.1_Pbx1/Jaspar

Match Rank:9
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----CATCAGTTAAGG
TCACCCATCAATAAACA

MA0063.1_Nkx2-5/Jaspar

Match Rank:10
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:CATCAGTTAAGG
---CAATTAA--