Information for 25-TATTWACGTAGC (Motif 28)


Reverse Opposite:

p-value:1e-57
log p-value:-1.313e+02
Information Content per bp:1.819
Number of Target Sequences with motif55.0
Percentage of Target Sequences with motif0.09%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets386.5 +/- 405.5bp
Average Position of motif in Background428.7 +/- 177.9bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0047.2_Foxa2/Jaspar

Match Rank:1
Score:0.70
Offset:0
Orientation:forward strand
Alignment:TATTWACGTAGC
TGTTTACTTAGG

MA0148.3_FOXA1/Jaspar

Match Rank:2
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----TATTWACGTAGC
TCCATGTTTACTTTG-

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:3
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TATTWACGTAGC
TGTTTACTTT--

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TATTWACGTAGC
TGTTTACTTT--

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:5
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TATTWACGTAGC
CNTGTTTACATA--

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TATTWACGTAGC
-ATTTGCATAA-

PH0144.1_Pou2f2/Jaspar

Match Rank:7
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TATTWACGTAGC-
TNTAATTTGCATANNN

PB0015.1_Foxa2_1/Jaspar

Match Rank:8
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----TATTWACGTAGC
NNNTTTGTTTACTTTTN

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:9
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TATTWACGTAGC---
NSTGTTTRCWCAGBNNN

PH0145.1_Pou2f3/Jaspar

Match Rank:10
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TATTWACGTAGC-
TNTAATTTGCATACNA