Information for 5-ACCATGGACAGC (Motif 5)


Reverse Opposite:

p-value:1e-365
log p-value:-8.409e+02
Information Content per bp:1.731
Number of Target Sequences with motif865.0
Percentage of Target Sequences with motif1.48%
Number of Background Sequences with motif141.0
Percentage of Background Sequences with motif0.25%
Average Position of motif in Targets283.4 +/- 404.8bp
Average Position of motif in Background375.7 +/- 217.8bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0138.2_REST/Jaspar

Match Rank:1
Score:0.83
Offset:-6
Orientation:forward strand
Alignment:------ACCATGGACAGC---
TTCAGCACCATGGACAGCGCC

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:2
Score:0.81
Offset:-5
Orientation:reverse strand
Alignment:-----ACCATGGACAGC---
TCAGCACCATGGACAGCTCC

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.66
Offset:1
Orientation:forward strand
Alignment:ACCATGGACAGC
-CCAGGAACAG-

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.60
Offset:1
Orientation:forward strand
Alignment:ACCATGGACAGC
-CAAAGGTCAG-

POL009.1_DCE_S_II/Jaspar

Match Rank:5
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:ACCATGGACAGC
------CACAGN

PH0169.1_Tgif1/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:forward strand
Alignment:ACCATGGACAGC-----
GATATTGACAGCTGCGT

MA0592.1_ESRRA/Jaspar

Match Rank:7
Score:0.58
Offset:1
Orientation:forward strand
Alignment:ACCATGGACAGC
-CCAAGGTCACA

MA0143.3_Sox2/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-ACCATGGACAGC
AACAAAGG-----

PH0170.1_Tgif2/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:ACCATGGACAGC-----
-GTATTGACAGCTNNTT

PH0141.1_Pknox2/Jaspar

Match Rank:10
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:ACCATGGACAGC-----
-NNATTGACAGGTGCTT