Information for 6-GGAATKCMNN (Motif 6)


Reverse Opposite:

p-value:1e-359
log p-value:-8.289e+02
Information Content per bp:1.629
Number of Target Sequences with motif11723.0
Percentage of Target Sequences with motif20.09%
Number of Background Sequences with motif7997.3
Percentage of Background Sequences with motif13.95%
Average Position of motif in Targets608.4 +/- 786.9bp
Average Position of motif in Background369.0 +/- 226.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.21
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:1
Score:0.93
Offset:-3
Orientation:forward strand
Alignment:---GGAATKCMNN
CCWGGAATGY---

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.92
Offset:-3
Orientation:forward strand
Alignment:---GGAATKCMNN
NCTGGAATGC---

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:3
Score:0.88
Offset:-3
Orientation:forward strand
Alignment:---GGAATKCMNN
CCWGGAATGY---

MA0090.1_TEAD1/Jaspar

Match Rank:4
Score:0.82
Offset:-4
Orientation:reverse strand
Alignment:----GGAATKCMNN
CNGAGGAATGTG--

MA0101.1_REL/Jaspar

Match Rank:5
Score:0.79
Offset:0
Orientation:reverse strand
Alignment:GGAATKCMNN
GGAAANCCCC

MA0081.1_SPIB/Jaspar

Match Rank:6
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---GGAATKCMNN
AGAGGAA------

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:7
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-GGAATKCMNN-
GGGAAATCCCCN

MA0107.1_RELA/Jaspar

Match Rank:8
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:GGAATKCMNN
GGAAATTCCC

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:9
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-GGAATKCMNN
GGGAATTTCC-

PB0171.1_Sox18_2/Jaspar

Match Rank:10
Score:0.71
Offset:-4
Orientation:reverse strand
Alignment:----GGAATKCMNN--
NNNNTGAATTCANNNC