| Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
| 1 |
| CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-32 | -7.431e+01 | 0.0000 | 64.0 | 10.63% | 748.2 | 1.54% | motif file (matrix) |
svg |
| 2 |
| BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer | 1e-26 | -6.177e+01 | 0.0000 | 72.0 | 11.96% | 1206.3 | 2.48% | motif file (matrix) |
svg |
| 3 |
| Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer | 1e-25 | -5.962e+01 | 0.0000 | 169.0 | 28.07% | 5804.9 | 11.96% | motif file (matrix) |
svg |
| 4 |
| NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer | 1e-25 | -5.956e+01 | 0.0000 | 97.0 | 16.11% | 2231.2 | 4.60% | motif file (matrix) |
svg |
| 5 |
| MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer | 1e-23 | -5.356e+01 | 0.0000 | 177.0 | 29.40% | 6598.4 | 13.59% | motif file (matrix) |
svg |
| 6 |
| BHLHA15(bHLH)/NIH3T3-BHLHB8.HA-ChIP-Seq(GSE119782)/Homer | 1e-21 | -5.054e+01 | 0.0000 | 202.0 | 33.55% | 8300.1 | 17.10% | motif file (matrix) |
svg |
| 7 |
| Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer | 1e-21 | -5.021e+01 | 0.0000 | 190.0 | 31.56% | 7584.6 | 15.62% | motif file (matrix) |
svg |
| 8 |
| Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer | 1e-21 | -4.859e+01 | 0.0000 | 131.0 | 21.76% | 4304.3 | 8.87% | motif file (matrix) |
svg |
| 9 |
| Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer | 1e-18 | -4.360e+01 | 0.0000 | 157.0 | 26.08% | 6043.3 | 12.45% | motif file (matrix) |
svg |
| 10 |
| Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer | 1e-18 | -4.311e+01 | 0.0000 | 164.0 | 27.24% | 6489.8 | 13.37% | motif file (matrix) |
svg |
| 11 |
| Twist2(bHLH)/Myoblast-Twist2.Ty1-ChIP-Seq(GSE127998)/Homer | 1e-17 | -3.984e+01 | 0.0000 | 225.0 | 37.38% | 10627.1 | 21.89% | motif file (matrix) |
svg |
| 12 |
| NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer | 1e-16 | -3.839e+01 | 0.0000 | 128.0 | 21.26% | 4700.8 | 9.68% | motif file (matrix) |
svg |
| 13 |
| Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer | 1e-16 | -3.755e+01 | 0.0000 | 208.0 | 34.55% | 9693.9 | 19.97% | motif file (matrix) |
svg |
| 14 |
| HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer | 1e-16 | -3.728e+01 | 0.0000 | 239.0 | 39.70% | 11819.2 | 24.34% | motif file (matrix) |
svg |
| 15 |
| TCF4(bHLH)/SHSY5Y-TCF4-ChIP-Seq(GSE96915)/Homer | 1e-15 | -3.599e+01 | 0.0000 | 196.0 | 32.56% | 9039.1 | 18.62% | motif file (matrix) |
svg |
| 16 |
| NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer | 1e-15 | -3.529e+01 | 0.0000 | 192.0 | 31.89% | 8838.4 | 18.21% | motif file (matrix) |
svg |
| 17 |
| MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer | 1e-14 | -3.350e+01 | 0.0000 | 127.0 | 21.10% | 4954.0 | 10.20% | motif file (matrix) |
svg |
| 18 |
| Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer | 1e-14 | -3.349e+01 | 0.0000 | 219.0 | 36.38% | 10810.0 | 22.27% | motif file (matrix) |
svg |
| 19 |
| Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer | 1e-12 | -2.944e+01 | 0.0000 | 286.0 | 47.51% | 16060.6 | 33.08% | motif file (matrix) |
svg |
| 20 |
| Ascl2(bHLH)/ESC-Ascl2-ChIP-Seq(GSE97712)/Homer | 1e-11 | -2.550e+01 | 0.0000 | 152.0 | 25.25% | 7128.2 | 14.68% | motif file (matrix) |
svg |
| 21 |
| E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer | 1e-10 | -2.391e+01 | 0.0000 | 182.0 | 30.23% | 9280.3 | 19.12% | motif file (matrix) |
svg |
| 22 |
| Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer | 1e-10 | -2.376e+01 | 0.0000 | 76.0 | 12.62% | 2710.4 | 5.58% | motif file (matrix) |
svg |
| 23 |
| NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer | 1e-9 | -2.172e+01 | 0.0000 | 193.0 | 32.06% | 10291.8 | 21.20% | motif file (matrix) |
svg |
| 24 |
| Bcl11a(Zf)/HSPC-BCL11A-ChIP-Seq(GSE104676)/Homer | 1e-7 | -1.763e+01 | 0.0000 | 84.0 | 13.95% | 3595.9 | 7.41% | motif file (matrix) |
svg |
| 25 |
| ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer | 1e-7 | -1.735e+01 | 0.0000 | 71.0 | 11.79% | 2854.7 | 5.88% | motif file (matrix) |
svg |
| 26 |
| Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer | 1e-6 | -1.550e+01 | 0.0000 | 84.0 | 13.95% | 3780.5 | 7.79% | motif file (matrix) |
svg |
| 27 |
| SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer | 1e-6 | -1.402e+01 | 0.0000 | 386.0 | 64.12% | 26405.1 | 54.39% | motif file (matrix) |
svg |
| 28 |
| TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer | 1e-5 | -1.309e+01 | 0.0000 | 62.0 | 10.30% | 2663.5 | 5.49% | motif file (matrix) |
svg |
| 29 |
| HIC1(Zf)/Treg-ZBTB29-ChIP-Seq(GSE99889)/Homer | 1e-4 | -1.131e+01 | 0.0002 | 208.0 | 34.55% | 12946.4 | 26.67% | motif file (matrix) |
svg |
| 30 |
| TEAD1(TEAD)/HepG2-TEAD1-ChIP-Seq(Encode)/Homer | 1e-4 | -9.469e+00 | 0.0011 | 79.0 | 13.12% | 4108.5 | 8.46% | motif file (matrix) |
svg |
| 31 |
| THRb(NR)/HepG2-THRb.Flag-ChIP-Seq(Encode)/Homer | 1e-4 | -9.425e+00 | 0.0011 | 60.0 | 9.97% | 2887.3 | 5.95% | motif file (matrix) |
svg |
| 32 |
| Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer | 1e-3 | -8.247e+00 | 0.0035 | 244.0 | 40.53% | 16351.9 | 33.68% | motif file (matrix) |
svg |
| 33 |
| CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer | 1e-3 | -8.056e+00 | 0.0041 | 59.0 | 9.80% | 2978.9 | 6.14% | motif file (matrix) |
svg |
| 34 |
| Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer | 1e-3 | -7.677e+00 | 0.0058 | 24.0 | 3.99% | 896.9 | 1.85% | motif file (matrix) |
svg |
| 35 |
| TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer | 1e-3 | -7.401e+00 | 0.0075 | 47.0 | 7.81% | 2287.6 | 4.71% | motif file (matrix) |
svg |
| 36 |
| Hoxa13(Homeobox)/ChickenMSG-Hoxa13.Flag-ChIP-Seq(GSE86088)/Homer | 1e-2 | -6.406e+00 | 0.0196 | 149.0 | 24.75% | 9602.2 | 19.78% | motif file (matrix) |
svg |
| 37 |
| Six4(Homeobox)/MCF7-SIX4-ChIP-Seq(Encode)/Homer | 1e-2 | -6.027e+00 | 0.0279 | 7.0 | 1.16% | 144.5 | 0.30% | motif file (matrix) |
svg |
| 38 |
| Hoxd11(Homeobox)/ChickenMSG-Hoxd11.Flag-ChIP-Seq(GSE86088)/Homer | 1e-2 | -5.953e+00 | 0.0293 | 147.0 | 24.42% | 9563.7 | 19.70% | motif file (matrix) |
svg |
| 39 |
| Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer | 1e-2 | -5.898e+00 | 0.0301 | 9.0 | 1.50% | 231.4 | 0.48% | motif file (matrix) |
svg |
| 40 |
| Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer | 1e-2 | -5.831e+00 | 0.0314 | 13.0 | 2.16% | 424.9 | 0.88% | motif file (matrix) |
svg |
| 41 |
| Hoxa11(Homeobox)/ChickenMSG-Hoxa11.Flag-ChIP-Seq(GSE86088)/Homer | 1e-2 | -5.486e+00 | 0.0433 | 140.0 | 23.26% | 9159.4 | 18.87% | motif file (matrix) |
svg |
| 42 |
| Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer | 1e-2 | -5.486e+00 | 0.0433 | 24.0 | 3.99% | 1062.0 | 2.19% | motif file (matrix) |
svg |
| 43 |
| TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer | 1e-2 | -5.422e+00 | 0.0440 | 66.0 | 10.96% | 3824.2 | 7.88% | motif file (matrix) |
svg |
| 44 |
| Hoxd13(Homeobox)/ChickenMSG-Hoxd13.Flag-ChIP-Seq(GSE86088)/Homer | 1e-2 | -5.365e+00 | 0.0455 | 93.0 | 15.45% | 5743.4 | 11.83% | motif file (matrix) |
svg |
| 45 |
| TEAD3(TEA)/HepG2-TEAD3-ChIP-Seq(Encode)/Homer | 1e-2 | -5.331e+00 | 0.0460 | 81.0 | 13.46% | 4893.1 | 10.08% | motif file (matrix) |
svg |
| 46 |
| RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer | 1e-2 | -5.190e+00 | 0.0518 | 34.0 | 5.65% | 1712.1 | 3.53% | motif file (matrix) |
svg |
| 47 |
| Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer | 1e-2 | -4.945e+00 | 0.0648 | 60.0 | 9.97% | 3491.5 | 7.19% | motif file (matrix) |
svg |
| 48 |
| Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer | 1e-2 | -4.857e+00 | 0.0693 | 31.0 | 5.15% | 1559.5 | 3.21% | motif file (matrix) |
svg |
| 49 |
| Pitx1:Ebox(Homeobox,bHLH)/Hindlimb-Pitx1-ChIP-Seq(GSE41591)/Homer | 1e-2 | -4.763e+00 | 0.0746 | 15.0 | 2.49% | 595.1 | 1.23% | motif file (matrix) |
svg |
| 50 |
| AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer | 1e-2 | -4.740e+00 | 0.0748 | 115.0 | 19.10% | 7494.1 | 15.44% | motif file (matrix) |
svg |