| Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
| 1 |
| CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-25 | -5.978e+01 | 0.0000 | 55.0 | 8.14% | 626.4 | 1.28% | motif file (matrix) |
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| 2 |
| BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer | 1e-16 | -3.765e+01 | 0.0000 | 55.0 | 8.14% | 1026.9 | 2.10% | motif file (matrix) |
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| 3 |
| Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer | 1e-14 | -3.354e+01 | 0.0000 | 145.0 | 21.45% | 5361.2 | 10.95% | motif file (matrix) |
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| 4 |
| EBF2(EBF)/BrownAdipose-EBF2-ChIP-Seq(GSE97114)/Homer | 1e-13 | -2.997e+01 | 0.0000 | 129.0 | 19.08% | 4744.6 | 9.69% | motif file (matrix) |
svg |
| 5 |
| BHLHA15(bHLH)/NIH3T3-BHLHB8.HA-ChIP-Seq(GSE119782)/Homer | 1e-12 | -2.766e+01 | 0.0000 | 182.0 | 26.92% | 7909.7 | 16.16% | motif file (matrix) |
svg |
| 6 |
| NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer | 1e-11 | -2.729e+01 | 0.0000 | 68.0 | 10.06% | 1883.9 | 3.85% | motif file (matrix) |
svg |
| 7 |
| EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer | 1e-11 | -2.691e+01 | 0.0000 | 143.0 | 21.15% | 5729.8 | 11.71% | motif file (matrix) |
svg |
| 8 |
| Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer | 1e-11 | -2.553e+01 | 0.0000 | 137.0 | 20.27% | 5502.2 | 11.24% | motif file (matrix) |
svg |
| 9 |
| Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer | 1e-10 | -2.341e+01 | 0.0000 | 192.0 | 28.40% | 8922.5 | 18.23% | motif file (matrix) |
svg |
| 10 |
| Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer | 1e-9 | -2.263e+01 | 0.0000 | 159.0 | 23.52% | 7017.9 | 14.34% | motif file (matrix) |
svg |
| 11 |
| Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer | 1e-9 | -2.204e+01 | 0.0000 | 142.0 | 21.01% | 6080.6 | 12.42% | motif file (matrix) |
svg |
| 12 |
| Twist2(bHLH)/Myoblast-Twist2.Ty1-ChIP-Seq(GSE127998)/Homer | 1e-9 | -2.188e+01 | 0.0000 | 209.0 | 30.92% | 10142.1 | 20.72% | motif file (matrix) |
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| 13 |
| ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer | 1e-8 | -2.068e+01 | 0.0000 | 78.0 | 11.54% | 2697.8 | 5.51% | motif file (matrix) |
svg |
| 14 |
| TCF4(bHLH)/SHSY5Y-TCF4-ChIP-Seq(GSE96915)/Homer | 1e-8 | -1.967e+01 | 0.0000 | 181.0 | 26.78% | 8652.6 | 17.68% | motif file (matrix) |
svg |
| 15 |
| Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer | 1e-8 | -1.858e+01 | 0.0000 | 98.0 | 14.50% | 3898.7 | 7.97% | motif file (matrix) |
svg |
| 16 |
| NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer | 1e-7 | -1.812e+01 | 0.0000 | 178.0 | 26.33% | 8646.4 | 17.67% | motif file (matrix) |
svg |
| 17 |
| NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer | 1e-7 | -1.777e+01 | 0.0000 | 107.0 | 15.83% | 4465.9 | 9.13% | motif file (matrix) |
svg |
| 18 |
| HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer | 1e-7 | -1.667e+01 | 0.0000 | 212.0 | 31.36% | 10986.0 | 22.45% | motif file (matrix) |
svg |
| 19 |
| NFIL3(bZIP)/HepG2-NFIL3-ChIP-Seq(Encode)/Homer | 1e-7 | -1.614e+01 | 0.0000 | 58.0 | 8.58% | 1973.4 | 4.03% | motif file (matrix) |
svg |
| 20 |
| X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer | 1e-6 | -1.488e+01 | 0.0000 | 22.0 | 3.25% | 436.0 | 0.89% | motif file (matrix) |
svg |
| 21 |
| MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer | 1e-6 | -1.460e+01 | 0.0000 | 101.0 | 14.94% | 4416.3 | 9.02% | motif file (matrix) |
svg |
| 22 |
| JunD(bZIP)/K562-JunD-ChIP-Seq/Homer | 1e-6 | -1.456e+01 | 0.0000 | 18.0 | 2.66% | 306.7 | 0.63% | motif file (matrix) |
svg |
| 23 |
| Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer | 1e-6 | -1.455e+01 | 0.0000 | 33.0 | 4.88% | 885.4 | 1.81% | motif file (matrix) |
svg |
| 24 |
| MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer | 1e-6 | -1.450e+01 | 0.0000 | 129.0 | 19.08% | 6076.9 | 12.42% | motif file (matrix) |
svg |
| 25 |
| Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer | 1e-5 | -1.371e+01 | 0.0000 | 269.0 | 39.79% | 15229.9 | 31.12% | motif file (matrix) |
svg |
| 26 |
| EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer | 1e-5 | -1.369e+01 | 0.0000 | 35.0 | 5.18% | 1010.0 | 2.06% | motif file (matrix) |
svg |
| 27 |
| Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer | 1e-5 | -1.319e+01 | 0.0000 | 20.0 | 2.96% | 409.3 | 0.84% | motif file (matrix) |
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| 28 |
| Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer | 1e-5 | -1.318e+01 | 0.0000 | 198.0 | 29.29% | 10588.0 | 21.63% | motif file (matrix) |
svg |
| 29 |
| Ascl2(bHLH)/ESC-Ascl2-ChIP-Seq(GSE97712)/Homer | 1e-5 | -1.291e+01 | 0.0000 | 131.0 | 19.38% | 6387.3 | 13.05% | motif file (matrix) |
svg |
| 30 |
| c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-5 | -1.236e+01 | 0.0001 | 35.0 | 5.18% | 1074.2 | 2.19% | motif file (matrix) |
svg |
| 31 |
| Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer | 1e-4 | -1.114e+01 | 0.0002 | 61.0 | 9.02% | 2486.4 | 5.08% | motif file (matrix) |
svg |
| 32 |
| RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer | 1e-4 | -1.096e+01 | 0.0002 | 17.0 | 2.51% | 361.1 | 0.74% | motif file (matrix) |
svg |
| 33 |
| SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer | 1e-4 | -1.022e+01 | 0.0005 | 396.0 | 58.58% | 24910.0 | 50.90% | motif file (matrix) |
svg |
| 34 |
| STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer | 1e-4 | -1.012e+01 | 0.0005 | 36.0 | 5.33% | 1248.9 | 2.55% | motif file (matrix) |
svg |
| 35 |
| E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer | 1e-4 | -9.994e+00 | 0.0006 | 157.0 | 23.22% | 8442.6 | 17.25% | motif file (matrix) |
svg |
| 36 |
| Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer | 1e-3 | -9.103e+00 | 0.0013 | 27.0 | 3.99% | 868.6 | 1.77% | motif file (matrix) |
svg |
| 37 |
| Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer | 1e-3 | -9.003e+00 | 0.0014 | 34.0 | 5.03% | 1219.3 | 2.49% | motif file (matrix) |
svg |
| 38 |
| Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer | 1e-3 | -8.986e+00 | 0.0014 | 44.0 | 6.51% | 1743.2 | 3.56% | motif file (matrix) |
svg |
| 39 |
| Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-3 | -8.719e+00 | 0.0018 | 69.0 | 10.21% | 3176.4 | 6.49% | motif file (matrix) |
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| 40 |
| Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer | 1e-3 | -7.575e+00 | 0.0055 | 54.0 | 7.99% | 2431.9 | 4.97% | motif file (matrix) |
svg |
| 41 |
| Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer | 1e-3 | -7.373e+00 | 0.0066 | 136.0 | 20.12% | 7543.2 | 15.41% | motif file (matrix) |
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| 42 |
| TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer | 1e-3 | -7.194e+00 | 0.0077 | 79.0 | 11.69% | 3966.2 | 8.10% | motif file (matrix) |
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| 43 |
| Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer | 1e-3 | -6.910e+00 | 0.0099 | 64.0 | 9.47% | 3096.3 | 6.33% | motif file (matrix) |
svg |
| 44 |
| NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer | 1e-2 | -6.537e+00 | 0.0141 | 162.0 | 23.96% | 9426.7 | 19.26% | motif file (matrix) |
svg |
| 45 |
| STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer | 1e-2 | -6.163e+00 | 0.0200 | 35.0 | 5.18% | 1495.2 | 3.06% | motif file (matrix) |
svg |
| 46 |
| CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer | 1e-2 | -6.076e+00 | 0.0214 | 58.0 | 8.58% | 2844.2 | 5.81% | motif file (matrix) |
svg |
| 47 |
| HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer | 1e-2 | -6.038e+00 | 0.0217 | 58.0 | 8.58% | 2849.3 | 5.82% | motif file (matrix) |
svg |
| 48 |
| TEAD3(TEA)/HepG2-TEAD3-ChIP-Seq(Encode)/Homer | 1e-2 | -5.852e+00 | 0.0256 | 95.0 | 14.05% | 5182.7 | 10.59% | motif file (matrix) |
svg |
| 49 |
| COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer | 1e-2 | -5.795e+00 | 0.0266 | 147.0 | 21.75% | 8593.9 | 17.56% | motif file (matrix) |
svg |
| 50 |
| EAR2(NR)/K562-NR2F6-ChIP-Seq(Encode)/Homer | 1e-2 | -5.705e+00 | 0.0285 | 114.0 | 16.86% | 6437.5 | 13.15% | motif file (matrix) |
svg |
| 51 |
| Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer | 1e-2 | -5.531e+00 | 0.0333 | 66.0 | 9.76% | 3410.8 | 6.97% | motif file (matrix) |
svg |
| 52 |
| Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer | 1e-2 | -5.304e+00 | 0.0402 | 18.0 | 2.66% | 651.4 | 1.33% | motif file (matrix) |
svg |
| 53 |
| Pitx1:Ebox(Homeobox,bHLH)/Hindlimb-Pitx1-ChIP-Seq(GSE41591)/Homer | 1e-2 | -5.304e+00 | 0.0402 | 18.0 | 2.66% | 651.7 | 1.33% | motif file (matrix) |
svg |
| 54 |
| Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer | 1e-2 | -4.955e+00 | 0.0559 | 38.0 | 5.62% | 1794.6 | 3.67% | motif file (matrix) |
svg |
| 55 |
| STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer | 1e-2 | -4.811e+00 | 0.0633 | 78.0 | 11.54% | 4287.9 | 8.76% | motif file (matrix) |
svg |
| 56 |
| CTCF-SatelliteElement(Zf?)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-2 | -4.772e+00 | 0.0647 | 5.0 | 0.74% | 89.4 | 0.18% | motif file (matrix) |
svg |
| 57 |
| Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer | 1e-2 | -4.706e+00 | 0.0679 | 257.0 | 38.02% | 16451.4 | 33.62% | motif file (matrix) |
svg |
| 58 |
| Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer | 1e-2 | -4.692e+00 | 0.0679 | 48.0 | 7.10% | 2428.4 | 4.96% | motif file (matrix) |
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