Homer de novo Motif Results (N1_con_open_motif/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
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More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 676
Total background sequences = 48928
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 A G T C A T G C C G T A A T G C G A T C C G T A A C T G C T A G A C G T A C T G A C T G T G A C 1e-33-7.634e+016.07%0.41%47.2bp (58.6bp)CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer(0.899)
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motif file (matrix)
2 T C G A C G A T T A G C A G C T G A C T C T A G A C T G T G A C C G T A A C T G 1e-19-4.428e+0111.54%3.47%54.7bp (61.1bp)NFIC/MA0161.2/Jaspar(0.861)
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motif file (matrix)
3 G C A T A G T C A G T C A G T C G T A C C G T A A C T G C T A G T C A G C T A G 1e-18-4.300e+0122.34%10.42%51.0bp (58.2bp)EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer(0.883)
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motif file (matrix)
4 A G T C C G T A C A T G G T A C A C G T A C T G A G C T C A G T 1e-15-3.551e+0116.86%7.46%54.2bp (63.1bp)MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer(0.978)
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motif file (matrix)
5 C A G T A G C T A C G T T C G A G T A C C G T A A G C T G T A C G T C A A G T C 1e-14-3.370e+017.10%1.80%55.4bp (55.3bp)JUN/MA0488.1/Jaspar(0.829)
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motif file (matrix)
6 C G T A A C G T A C G T A C G T G C T A A C G T A C T G G C T A C G T A A T C G C G A T C T A G 1e-12-2.766e+012.07%0.13%60.2bp (65.3bp)PB0145.1_Mafb_2/Jaspar(0.658)
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motif file (matrix)
7 * C G A T T A C G C G A T A G C T A G T C A G T C C A G T A T C G T A C G T G C A G T C A G C T A 1e-11-2.676e+013.55%0.56%51.1bp (57.5bp)Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer(0.839)
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motif file (matrix)
8 * A C G T A C T G A C G T A G T C A G T C A C G T A C G T C T G A A G T C A G C T A C G T A C T G 1e-11-2.622e+010.74%0.00%43.3bp (33.7bp)THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer(0.689)
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motif file (matrix)
9 * A C T G A T C G A C G T A C T G G T A C C G A T A C T G A C G T A G T C A G T C C G T A A C G T 1e-9-2.161e+010.89%0.01%32.8bp (43.3bp)Hnf6b(Homeobox)/LNCaP-Hnf6b-ChIP-Seq(GSE106305)/Homer(0.595)
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motif file (matrix)
10 * A G T C A C T G C G T A A C T G A T C G C T A G C T A G C T A G A C T G C G T A A C T G A G T C 1e-9-2.158e+011.18%0.04%58.4bp (45.5bp)Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer(0.727)
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motif file (matrix)
11 * A C T G A G T C C G T A A C T G A C G T A C T G A G T C C G T A A C T G G T A C C T G A A C T G 1e-8-2.033e+010.59%0.00%40.1bp (0.0bp)PB0091.1_Zbtb3_1/Jaspar(0.671)
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motif file (matrix)
12 * A T C G G T A C G C A T C T G A T C G A G T C A A G T C T A G C G T A C A G T C 1e-8-1.995e+015.33%1.66%55.6bp (59.8bp)PH0139.1_Pitx3/Jaspar(0.639)
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motif file (matrix)
13 * C T A G A T C G A C T G A G C T G T A C A C G T A C G T A C T G A C T G C T G A 1e-8-1.978e+013.11%0.61%55.1bp (54.7bp)LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer(0.662)
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motif file (matrix)
14 * T A C G G C T A A T C G C G A T C T G A G C T A A G C T G C A T 1e-8-1.927e+0129.73%20.33%56.9bp (60.1bp)MF0010.1_Homeobox_class/Jaspar(0.704)
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motif file (matrix)
15 * A C G T A G T C C G A T A T C G C G A T A C T G C G T A A C T G T A G C C G T A A C T G A G C T 1e-8-1.890e+013.40%0.77%57.1bp (57.3bp)FOXH1/MA0479.1/Jaspar(0.643)
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motif file (matrix)
16 * G A T C A G T C A C G T A T C G C T A G T G C A G A T C T A G C C T G A A C T G 1e-8-1.887e+015.92%2.07%53.2bp (61.4bp)AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer(0.637)
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motif file (matrix)
17 * C G T A A C T G G T C A A C T G A C T G T G A C A T C G G C T A C G T A A G T C 1e-7-1.821e+012.07%0.28%52.8bp (57.7bp)PB0094.1_Zfp128_1/Jaspar(0.624)
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motif file (matrix)
18 * A G T C A C G T A C G T A G T C T A G C C G T A A G T C C G T A A T C G C G T A C A G T C T G A 1e-7-1.740e+012.22%0.35%57.1bp (56.3bp)STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer(0.686)
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motif file (matrix)
19 * A C G T A G T C C G A T A G T C C G T A G A C T G C T A A C G T G A C T A G T C 1e-7-1.683e+013.40%0.86%52.5bp (55.7bp)IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer(0.641)
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motif file (matrix)
20 * G C A T A C T G T C A G T G A C T C G A A G T C C G A T C G A T A G T C G A T C 1e-7-1.656e+013.11%0.74%61.7bp (58.4bp)ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer(0.726)
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motif file (matrix)
21 * A C T G A C G T G A C T A C T G A G T C A G T C C G T A A G C T A C T G C T A G A T G C C T G A 1e-6-1.516e+011.18%0.09%34.8bp (50.1bp)Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer(0.930)
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motif file (matrix)
22 * A C T G A G T C C G A T A C T G A C T G A G T C A C G T C T G A 1e-5-1.370e+017.25%3.42%52.1bp (64.2bp)HIC1(Zf)/Treg-ZBTB29-ChIP-Seq(GSE99889)/Homer(0.687)
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motif file (matrix)
23 * C G T A A C T G A C G T A C T G A C T G C A G T A C G T A C T G A C G T A C T G C G T A A G T C 1e-5-1.327e+010.89%0.05%52.6bp (56.7bp)Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer(0.661)
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motif file (matrix)
24 * G T A C G C A T C T A G G C A T C T A G A G T C C A T G C A T G 1e-5-1.325e+016.36%2.87%51.2bp (59.1bp)RUNX3/MA0684.1/Jaspar(0.668)
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motif file (matrix)
25 * G A C T A C G T C T G A T C A G T C A G C A T G C A G T G C T A T C G A A C T G 1e-5-1.208e+011.78%0.34%49.2bp (56.7bp)Barhl1/MA0877.1/Jaspar(0.651)
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motif file (matrix)
26 * C G T A C G T A G T A C C G T A A G T C C G T A A G T C A G C T 1e-5-1.180e+016.80%3.36%56.8bp (59.1bp)POL007.1_BREd/Jaspar(0.696)
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motif file (matrix)
27 * A C G T A G T C A C G T A C T G A G C T A T C G A T G C A C G T A T C G A C G T A G T C A C G T 1e-4-1.077e+010.89%0.08%49.4bp (80.1bp)RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer(0.644)
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motif file (matrix)
28 * A C G T A C T G A G T C A C T G A C G T C G T A A G T C C G T A A C G T A C T G 1e-4-9.268e+000.30%0.00%18.2bp (42.3bp)PH0083.1_Irx3_1/Jaspar(0.661)
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motif file (matrix)
29 * C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C T G C T A G A C G T T C G A C G T A 1e-4-9.268e+000.30%0.00%56.4bp (0.0bp)RORA(var.2)/MA0072.1/Jaspar(0.622)
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motif file (matrix)
30 * C G T A A C T G C G T A A C T G C G T A A G T C C G T A A C T G C G T A A T C G C G T A A C G T 1e-3-7.292e+000.59%0.06%64.7bp (62.2bp)ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer(0.608)
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motif file (matrix)
31 * A G T C A G T C C G T A A C G T A C T G A C T G A C G T A G T C A C T G A C T G 1e-2-6.523e+000.30%0.01%39.7bp (25.5bp)SOX13/MA1120.1/Jaspar(0.619)
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motif file (matrix)
32 * A G T C A G T C A C G T A G T C A G T C A C G T A G T C A G T C A G T C A C G T A C G T C G T A 1e-1-4.289e+000.15%0.00%56.0bp (5.3bp)ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer(0.726)
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motif file (matrix)
33 * A C G T A C T G C G T A C G T A C G T A C G T A A C T G A C T G C G T A A G T C A G T C A C G T 1e-1-4.289e+000.15%0.00%53.5bp (36.8bp)NR1H4/MA1110.1/Jaspar(0.588)
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motif file (matrix)
34 * A C T G C G T A A C G T A C G T A C G T A C G T G T A C A C G T A C T G C G T A A C T G A C T G 1e-1-2.707e+000.15%0.01%34.7bp (64.9bp)PH0068.1_Hoxc13/Jaspar(0.717)
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motif file (matrix)