| Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
| 1 |
| ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer | 1e-136 | -3.132e+02 | 0.0000 | 177.0 | 23.29% | 865.4 | 1.79% | motif file (matrix) |
svg |
| 2 |
| FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer | 1e-130 | -2.994e+02 | 0.0000 | 161.0 | 21.18% | 709.0 | 1.47% | motif file (matrix) |
svg |
| 3 |
| GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer | 1e-126 | -2.911e+02 | 0.0000 | 177.0 | 23.29% | 988.9 | 2.05% | motif file (matrix) |
svg |
| 4 |
| GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer | 1e-121 | -2.796e+02 | 0.0000 | 137.0 | 18.03% | 491.4 | 1.02% | motif file (matrix) |
svg |
| 5 |
| PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer | 1e-104 | -2.412e+02 | 0.0000 | 177.0 | 23.29% | 1343.9 | 2.79% | motif file (matrix) |
svg |
| 6 |
| FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-88 | -2.047e+02 | 0.0000 | 414.0 | 54.47% | 10213.6 | 21.17% | motif file (matrix) |
svg |
| 7 |
| FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer | 1e-87 | -2.012e+02 | 0.0000 | 370.0 | 48.68% | 8312.6 | 17.23% | motif file (matrix) |
svg |
| 8 |
| FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer | 1e-82 | -1.904e+02 | 0.0000 | 369.0 | 48.55% | 8589.0 | 17.80% | motif file (matrix) |
svg |
| 9 |
| PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer | 1e-79 | -1.828e+02 | 0.0000 | 414.0 | 54.47% | 10942.7 | 22.68% | motif file (matrix) |
svg |
| 10 |
| Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer | 1e-77 | -1.777e+02 | 0.0000 | 293.0 | 38.55% | 5786.7 | 11.99% | motif file (matrix) |
svg |
| 11 |
| Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer | 1e-72 | -1.674e+02 | 0.0000 | 289.0 | 38.03% | 5895.8 | 12.22% | motif file (matrix) |
svg |
| 12 |
| Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer | 1e-66 | -1.527e+02 | 0.0000 | 176.0 | 23.16% | 2353.2 | 4.88% | motif file (matrix) |
svg |
| 13 |
| FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer | 1e-38 | -8.860e+01 | 0.0000 | 279.0 | 36.71% | 8151.6 | 16.89% | motif file (matrix) |
svg |
| 14 |
| FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer | 1e-35 | -8.253e+01 | 0.0000 | 257.0 | 33.82% | 7394.6 | 15.33% | motif file (matrix) |
svg |
| 15 |
| Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer | 1e-35 | -8.070e+01 | 0.0000 | 273.0 | 35.92% | 8230.9 | 17.06% | motif file (matrix) |
svg |
| 16 |
| FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer | 1e-34 | -7.895e+01 | 0.0000 | 153.0 | 20.13% | 3175.0 | 6.58% | motif file (matrix) |
svg |
| 17 |
| Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer | 1e-32 | -7.504e+01 | 0.0000 | 218.0 | 28.68% | 5955.8 | 12.34% | motif file (matrix) |
svg |
| 18 |
| AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer | 1e-30 | -7.008e+01 | 0.0000 | 418.0 | 55.00% | 16609.7 | 34.42% | motif file (matrix) |
svg |
| 19 |
| FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer | 1e-25 | -5.900e+01 | 0.0000 | 164.0 | 21.58% | 4288.7 | 8.89% | motif file (matrix) |
svg |
| 20 |
| NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-24 | -5.576e+01 | 0.0000 | 43.0 | 5.66% | 338.4 | 0.70% | motif file (matrix) |
svg |
| 21 |
| FoxD3(forkhead)/ZebrafishEmbryo-Foxd3.biotin-ChIP-seq(GSE106676)/Homer | 1e-19 | -4.447e+01 | 0.0000 | 202.0 | 26.58% | 6732.1 | 13.95% | motif file (matrix) |
svg |
| 22 |
| HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer | 1e-14 | -3.346e+01 | 0.0000 | 217.0 | 28.55% | 8234.6 | 17.07% | motif file (matrix) |
svg |
| 23 |
| Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer | 1e-14 | -3.331e+01 | 0.0000 | 271.0 | 35.66% | 11136.2 | 23.08% | motif file (matrix) |
svg |
| 24 |
| Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer | 1e-11 | -2.540e+01 | 0.0000 | 158.0 | 20.79% | 5844.0 | 12.11% | motif file (matrix) |
svg |
| 25 |
| Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer | 1e-10 | -2.430e+01 | 0.0000 | 105.0 | 13.82% | 3365.8 | 6.98% | motif file (matrix) |
svg |
| 26 |
| Hoxd10(Homeobox)/ChickenMSG-Hoxd10.Flag-ChIP-Seq(GSE86088)/Homer | 1e-10 | -2.383e+01 | 0.0000 | 195.0 | 25.66% | 7887.4 | 16.35% | motif file (matrix) |
svg |
| 27 |
| Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer | 1e-9 | -2.156e+01 | 0.0000 | 113.0 | 14.87% | 3915.5 | 8.11% | motif file (matrix) |
svg |
| 28 |
| Hoxd13(Homeobox)/ChickenMSG-Hoxd13.Flag-ChIP-Seq(GSE86088)/Homer | 1e-9 | -2.138e+01 | 0.0000 | 283.0 | 37.24% | 13037.4 | 27.02% | motif file (matrix) |
svg |
| 29 |
| NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer | 1e-9 | -2.073e+01 | 0.0000 | 46.0 | 6.05% | 1045.4 | 2.17% | motif file (matrix) |
svg |
| 30 |
| NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer | 1e-8 | -2.036e+01 | 0.0000 | 167.0 | 21.97% | 6730.8 | 13.95% | motif file (matrix) |
svg |
| 31 |
| Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer | 1e-8 | -2.023e+01 | 0.0000 | 159.0 | 20.92% | 6324.9 | 13.11% | motif file (matrix) |
svg |
| 32 |
| GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-7 | -1.798e+01 | 0.0000 | 225.0 | 29.61% | 10141.8 | 21.02% | motif file (matrix) |
svg |
| 33 |
| TRPS1(Zf)/MCF7-TRPS1-ChIP-Seq(GSE107013)/Homer | 1e-7 | -1.768e+01 | 0.0000 | 292.0 | 38.42% | 14036.5 | 29.09% | motif file (matrix) |
svg |
| 34 |
| Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer | 1e-7 | -1.705e+01 | 0.0000 | 152.0 | 20.00% | 6259.7 | 12.97% | motif file (matrix) |
svg |
| 35 |
| Hoxd11(Homeobox)/ChickenMSG-Hoxd11.Flag-ChIP-Seq(GSE86088)/Homer | 1e-6 | -1.481e+01 | 0.0000 | 345.0 | 45.39% | 17643.2 | 36.57% | motif file (matrix) |
svg |
| 36 |
| Hoxa11(Homeobox)/ChickenMSG-Hoxa11.Flag-ChIP-Seq(GSE86088)/Homer | 1e-6 | -1.479e+01 | 0.0000 | 355.0 | 46.71% | 18259.0 | 37.84% | motif file (matrix) |
svg |
| 37 |
| CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer | 1e-6 | -1.466e+01 | 0.0000 | 167.0 | 21.97% | 7322.9 | 15.18% | motif file (matrix) |
svg |
| 38 |
| Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer | 1e-5 | -1.345e+01 | 0.0000 | 121.0 | 15.92% | 4992.2 | 10.35% | motif file (matrix) |
svg |
| 39 |
| Hoxa13(Homeobox)/ChickenMSG-Hoxa13.Flag-ChIP-Seq(GSE86088)/Homer | 1e-5 | -1.342e+01 | 0.0000 | 377.0 | 49.61% | 19849.4 | 41.14% | motif file (matrix) |
svg |
| 40 |
| Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer | 1e-5 | -1.321e+01 | 0.0000 | 124.0 | 16.32% | 5175.8 | 10.73% | motif file (matrix) |
svg |
| 41 |
| ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer | 1e-4 | -1.039e+01 | 0.0003 | 111.0 | 14.61% | 4797.5 | 9.94% | motif file (matrix) |
svg |
| 42 |
| ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer | 1e-4 | -9.788e+00 | 0.0006 | 87.0 | 11.45% | 3598.5 | 7.46% | motif file (matrix) |
svg |
| 43 |
| Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer | 1e-4 | -9.536e+00 | 0.0007 | 218.0 | 28.68% | 10950.1 | 22.69% | motif file (matrix) |
svg |
| 44 |
| GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer | 1e-4 | -9.294e+00 | 0.0009 | 72.0 | 9.47% | 2877.0 | 5.96% | motif file (matrix) |
svg |
| 45 |
| Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer | 1e-3 | -9.059e+00 | 0.0011 | 105.0 | 13.82% | 4635.9 | 9.61% | motif file (matrix) |
svg |
| 46 |
| Hoxa9(Homeobox)/ChickenMSG-Hoxa9.Flag-ChIP-Seq(GSE86088)/Homer | 1e-3 | -9.032e+00 | 0.0011 | 350.0 | 46.05% | 19023.7 | 39.43% | motif file (matrix) |
svg |
| 47 |
| ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer | 1e-3 | -8.758e+00 | 0.0014 | 77.0 | 10.13% | 3187.4 | 6.61% | motif file (matrix) |
svg |
| 48 |
| GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-3 | -8.225e+00 | 0.0024 | 18.0 | 2.37% | 436.8 | 0.91% | motif file (matrix) |
svg |
| 49 |
| Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer | 1e-3 | -8.166e+00 | 0.0025 | 37.0 | 4.87% | 1256.5 | 2.60% | motif file (matrix) |
svg |
| 50 |
| Elf4(ETS)/BMDM-Elf4-ChIP-Seq(GSE88699)/Homer | 1e-3 | -7.743e+00 | 0.0037 | 83.0 | 10.92% | 3618.0 | 7.50% | motif file (matrix) |
svg |
| 51 |
| Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer | 1e-3 | -6.923e+00 | 0.0083 | 188.0 | 24.74% | 9683.3 | 20.07% | motif file (matrix) |
svg |
| 52 |
| Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer | 1e-2 | -6.904e+00 | 0.0083 | 31.0 | 4.08% | 1064.0 | 2.21% | motif file (matrix) |
svg |
| 53 |
| ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer | 1e-2 | -6.866e+00 | 0.0084 | 22.0 | 2.89% | 660.2 | 1.37% | motif file (matrix) |
svg |
| 54 |
| PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-2 | -6.573e+00 | 0.0111 | 45.0 | 5.92% | 1769.5 | 3.67% | motif file (matrix) |
svg |
| 55 |
| LEF1(HMG)/H1-LEF1-ChIP-Seq(GSE64758)/Homer | 1e-2 | -6.404e+00 | 0.0129 | 86.0 | 11.32% | 3954.7 | 8.20% | motif file (matrix) |
svg |
| 56 |
| Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer | 1e-2 | -6.331e+00 | 0.0136 | 125.0 | 16.45% | 6147.8 | 12.74% | motif file (matrix) |
svg |
| 57 |
| SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer | 1e-2 | -6.318e+00 | 0.0136 | 88.0 | 11.58% | 4076.1 | 8.45% | motif file (matrix) |
svg |
| 58 |
| ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer | 1e-2 | -6.280e+00 | 0.0138 | 128.0 | 16.84% | 6327.9 | 13.11% | motif file (matrix) |
svg |
| 59 |
| Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer | 1e-2 | -6.080e+00 | 0.0166 | 133.0 | 17.50% | 6650.4 | 13.78% | motif file (matrix) |
svg |
| 60 |
| Hnf6b(Homeobox)/LNCaP-Hnf6b-ChIP-Seq(GSE106305)/Homer | 1e-2 | -5.997e+00 | 0.0177 | 132.0 | 17.37% | 6608.5 | 13.70% | motif file (matrix) |
svg |
| 61 |
| Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer | 1e-2 | -5.945e+00 | 0.0184 | 241.0 | 31.71% | 13066.5 | 27.08% | motif file (matrix) |
svg |
| 62 |
| GATA3(Zf),DR8/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-2 | -5.842e+00 | 0.0200 | 14.0 | 1.84% | 373.8 | 0.77% | motif file (matrix) |
svg |
| 63 |
| Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer | 1e-2 | -5.776e+00 | 0.0211 | 94.0 | 12.37% | 4491.3 | 9.31% | motif file (matrix) |
svg |
| 64 |
| ETV4(ETS)/HepG2-ETV4-ChIP-Seq(ENCODE)/Homer | 1e-2 | -5.562e+00 | 0.0257 | 69.0 | 9.08% | 3144.7 | 6.52% | motif file (matrix) |
svg |
| 65 |
| Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer | 1e-2 | -5.302e+00 | 0.0328 | 76.0 | 10.00% | 3565.9 | 7.39% | motif file (matrix) |
svg |
| 66 |
| MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer | 1e-2 | -5.228e+00 | 0.0348 | 69.0 | 9.08% | 3191.5 | 6.61% | motif file (matrix) |
svg |
| 67 |
| Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer | 1e-2 | -5.147e+00 | 0.0372 | 83.0 | 10.92% | 3978.1 | 8.24% | motif file (matrix) |
svg |
| 68 |
| Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer | 1e-2 | -4.991e+00 | 0.0428 | 199.0 | 26.18% | 10775.4 | 22.33% | motif file (matrix) |
svg |
| 69 |
| Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer | 1e-2 | -4.855e+00 | 0.0483 | 30.0 | 3.95% | 1175.1 | 2.44% | motif file (matrix) |
svg |
| 70 |
| Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer | 1e-2 | -4.834e+00 | 0.0486 | 87.0 | 11.45% | 4255.8 | 8.82% | motif file (matrix) |
svg |
| 71 |
| Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer | 1e-2 | -4.765e+00 | 0.0514 | 51.0 | 6.71% | 2278.8 | 4.72% | motif file (matrix) |
svg |
| 72 |
| HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer | 1e-2 | -4.724e+00 | 0.0528 | 26.0 | 3.42% | 988.9 | 2.05% | motif file (matrix) |
svg |