Homer de novo Motif Results (GSE28950_VCaP_AR_0hr_motif/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 760
Total background sequences = 48240
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 C T A G A C T G C T G A C T G A A G T C C G T A A T C G G C A T T A C G A G C T A C T G G A C T 1e-125-2.893e+0224.47%2.38%47.7bp (64.6bp)GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer(0.908)
More Information | Similar Motifs Found
motif file (matrix)
2 G C A T T C A G C G A T C T A G A G C T C G T A C G T A C G T A A G T C C G T A 1e-101-2.339e+0240.92%10.75%49.6bp (63.6bp)FOXA1/MA0148.3/Jaspar(0.935)
More Information | Similar Motifs Found
motif file (matrix)
3 A G C T A G C T C G A T C G A T T G C A A G C T C A T G C T A G A T C G T G A C 1e-24-5.598e+0120.79%8.62%53.6bp (59.0bp)Hoxd13(Homeobox)/ChickenMSG-Hoxd13.Flag-ChIP-Seq(GSE86088)/Homer(0.907)
More Information | Similar Motifs Found
motif file (matrix)
4 A C T G A G T C A C G T A G T C A G C T G A C T C G A T C T A G 1e-18-4.287e+0142.50%27.37%54.1bp (61.7bp)POL013.1_MED-1/Jaspar(0.694)
More Information | Similar Motifs Found
motif file (matrix)
5 C A T G C G A T A C T G C G A T C A T G G T A C A C G T A G C T C A G T C G A T 1e-18-4.210e+018.68%2.37%53.1bp (63.0bp)PB0208.1_Zscan4_2/Jaspar(0.731)
More Information | Similar Motifs Found
motif file (matrix)
6 C G T A A G T C G C T A C G A T A C T G G T A C C G T A C G T A A C T G C G T A C G T A G T A C 1e-15-3.483e+011.32%0.02%67.3bp (55.5bp)Tcf7(HMG)/GM12878-TCF7-ChIP-Seq(Encode)/Homer(0.634)
More Information | Similar Motifs Found
motif file (matrix)
7 A G T C A G T C C G A T A C T G A C T G G C T A C T G A A T G C 1e-14-3.377e+0115.53%7.12%59.7bp (60.4bp)Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer(0.744)
More Information | Similar Motifs Found
motif file (matrix)
8 G T A C C G T A G C T A G C T A C G A T T G C A G A C T A G C T C G A T C T A G G C T A T A G C 1e-13-3.082e+016.58%1.86%55.9bp (58.1bp)Arid5a/MA0602.1/Jaspar(0.675)
More Information | Similar Motifs Found
motif file (matrix)
9 G C A T C G T A T G A C C G T A G T A C C G T A C A T G C G T A T C A G G T A C C G T A C A T G 1e-12-2.903e+012.89%0.36%55.2bp (66.8bp)PB0166.1_Sox12_2/Jaspar(0.687)
More Information | Similar Motifs Found
motif file (matrix)
10 A G T C A G T C G C A T A T C G G C A T C T G A G T A C C T G A 1e-12-2.886e+0116.58%8.42%53.9bp (65.4bp)HOXC13/MA0907.1/Jaspar(0.686)
More Information | Similar Motifs Found
motif file (matrix)
11 A G T C C G T A A G C T A C G T A G T C A T C G C T A G A C G T A C G T A T G C 1e-12-2.838e+011.05%0.02%70.0bp (38.8bp)MF0009.1_TRP(MYB)_class/Jaspar(0.703)
More Information | Similar Motifs Found
motif file (matrix)
12 A C G T A G T C G A C T A G C T G A T C C G T A C T G A C G T A A G T C G T C A C G T A A G T C 1e-12-2.811e+012.50%0.27%56.9bp (65.3bp)SRY/MA0084.1/Jaspar(0.653)
More Information | Similar Motifs Found
motif file (matrix)
13 * A T G C C G T A A C G T T C A G T G A C A G T C C G T A C G T A T A G C G C T A C T G A G T C A 1e-11-2.655e+012.89%0.41%49.9bp (59.7bp)NFIA/MA0670.1/Jaspar(0.696)
More Information | Similar Motifs Found
motif file (matrix)
14 * C G T A C T A G T A C G A C G T C G T A C T G A C G T A A C T G A G T C A C G T A C T G A T G C 1e-11-2.641e+010.92%0.01%41.5bp (51.6bp)Myod1/MA0499.1/Jaspar(0.636)
More Information | Similar Motifs Found
motif file (matrix)
15 * G T A C G T C A T A G C G C A T A G C T A G T C A T G C A C G T A C G T A G T C 1e-11-2.540e+013.95%0.85%50.7bp (57.5bp)ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer(0.837)
More Information | Similar Motifs Found
motif file (matrix)
16 * A C G T A C T G A G T C A T G C C G A T C G T A G T A C A G T C A G T C C G T A 1e-10-2.520e+013.03%0.49%46.7bp (59.4bp)NFIA/MA0670.1/Jaspar(0.756)
More Information | Similar Motifs Found
motif file (matrix)
17 * C T G A A G T C C G A T A C G T A C T G C G A T C G T A C G A T A G T C C G T A C G T A A C G T 1e-10-2.408e+010.92%0.02%62.7bp (53.9bp)DMRT3/MA0610.1/Jaspar(0.757)
More Information | Similar Motifs Found
motif file (matrix)
18 * A C T G A G T C G T A C G T C A C T G A A T C G A G T C A T C G C G T A A C T G 1e-8-2.064e+011.84%0.21%51.0bp (63.5bp)NFIC/MA0161.2/Jaspar(0.684)
More Information | Similar Motifs Found
motif file (matrix)
19 * A C T G A C G T G A T C A T C G C G T A A C G T A G T C C G T A A C G T A C G T A C G T C G T A 1e-8-1.980e+010.53%0.00%33.7bp (0.0bp)BARHL2/MA0635.1/Jaspar(0.703)
More Information | Similar Motifs Found
motif file (matrix)
20 * A C G T A C G T G T A C C G T A A G C T A G T C A C G T A C T G T A G C C T A G 1e-8-1.963e+012.37%0.39%65.1bp (58.4bp)ZEB1/MA0103.3/Jaspar(0.678)
More Information | Similar Motifs Found
motif file (matrix)
21 * C A G T A C T G G A T C G T C A C G T A C T G A A C T G A G T C A G C T G A C T 1e-8-1.927e+013.68%0.97%56.1bp (61.5bp)Nr2e3/MA0164.1/Jaspar(0.775)
More Information | Similar Motifs Found
motif file (matrix)
22 * C G T A G T C A A C G T C G T A C T A G A C G T A G T C A C G T A C T G C T A G 1e-7-1.673e+011.32%0.12%36.5bp (53.9bp)Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer(0.701)
More Information | Similar Motifs Found
motif file (matrix)
23 * A C G T A C G T A G T C A G T C C G T A A C G T A C G T A C G T A C T G C G T A A C G T A C T G 1e-5-1.219e+010.39%0.01%29.3bp (98.6bp)PB0083.1_Tcf7_1/Jaspar(0.690)
More Information | Similar Motifs Found
motif file (matrix)
24 * A G C T C T A G A G T C C G T A A G T C C T A G A C G T C G T A A C G T A C T G A C G T A C T G 1e-4-1.134e+010.66%0.04%50.1bp (79.7bp)HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer(0.726)
More Information | Similar Motifs Found
motif file (matrix)
25 * A C T G A T G C A G C T A C T G A G T C A T G C C T A G A T G C A T C G A C T G A G T C C T G A 1e-4-1.014e+010.39%0.01%79.7bp (22.4bp)Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer(0.622)
More Information | Similar Motifs Found
motif file (matrix)