Homer Known Motif Enrichment Results (promoter_motif)

Homer de novo Motif Results
Gene Ontology Enrichment Results
Known Motif Enrichment Results (txt file)
Total Target Sequences = 12993, Total Background Sequences = 34666
RankMotifNameP-valuelog P-pvalueq-value (Benjamini)# Target Sequences with Motif% of Targets Sequences with Motif# Background Sequences with Motif% of Background Sequences with MotifMotif File PDF
1Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer1e-43-1.001e+020.00005657.043.54%13024.137.57%motif file (matrix) pdf
2Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer1e-42-9.704e+010.00005616.043.22%12950.937.36%motif file (matrix) pdf
3ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer1e-39-9.086e+010.00005223.040.20%11998.534.61%motif file (matrix) pdf
4ETS(ETS)/Promoter/Homer1e-39-9.077e+010.00003504.026.97%7640.022.04%motif file (matrix) pdf
5Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer1e-34-7.959e+010.00008747.067.32%21530.662.11%motif file (matrix) pdf
6Sp1(Zf)/Promoter/Homer1e-29-6.778e+010.00004311.033.18%9916.528.61%motif file (matrix) pdf
7GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer1e-29-6.703e+010.00007452.057.35%18168.852.41%motif file (matrix) pdf
8GFY-Staf(?,Zf)/Promoter/Homer1e-25-5.969e+010.0000685.05.27%1193.23.44%motif file (matrix) pdf
9MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer1e-24-5.753e+010.000010554.081.22%26857.977.48%motif file (matrix) pdf
10ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer1e-23-5.309e+010.00009639.074.18%24342.170.22%motif file (matrix) pdf
11BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer1e-22-5.278e+010.00009762.075.13%24689.271.23%motif file (matrix) pdf
12E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer1e-22-5.254e+010.00004850.037.32%11501.133.18%motif file (matrix) pdf
13NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer1e-22-5.143e+010.00001739.013.38%3685.510.63%motif file (matrix) pdf
14ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer1e-20-4.813e+010.000010315.079.38%26303.975.88%motif file (matrix) pdf
15ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer1e-19-4.564e+010.00008140.062.64%20340.758.68%motif file (matrix) pdf
16NRF(NRF)/Promoter/Homer1e-18-4.346e+010.00001882.014.48%4110.011.86%motif file (matrix) pdf
17Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer1e-16-3.740e+010.00004700.036.17%11344.332.73%motif file (matrix) pdf
18Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer1e-15-3.660e+010.00008988.069.17%22803.165.78%motif file (matrix) pdf
19Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer1e-15-3.601e+010.00006071.046.72%14967.943.18%motif file (matrix) pdf
20AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer1e-15-3.551e+010.00009716.074.77%24825.871.62%motif file (matrix) pdf
21Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer1e-15-3.475e+010.000010894.083.84%28130.381.15%motif file (matrix) pdf
22YY1(Zf)/Promoter/Homer1e-15-3.457e+010.0000901.06.93%1837.25.30%motif file (matrix) pdf
23AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer1e-15-3.455e+010.00008534.065.68%21601.862.32%motif file (matrix) pdf
24ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer1e-14-3.375e+010.00006410.049.33%15908.845.89%motif file (matrix) pdf
25Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer1e-14-3.309e+010.000010989.084.57%28424.182.00%motif file (matrix) pdf
26STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer1e-14-3.308e+010.00004908.037.77%11963.034.51%motif file (matrix) pdf
27SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer1e-13-3.202e+010.00007934.061.06%20023.957.77%motif file (matrix) pdf
28GFY(?)/Promoter/Homer1e-13-3.148e+010.0000834.06.42%1705.34.92%motif file (matrix) pdf
29E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer1e-13-3.108e+010.00005636.043.37%13911.940.13%motif file (matrix) pdf
30CRE(bZIP)/Promoter/Homer1e-13-3.022e+010.00002099.016.15%4805.513.86%motif file (matrix) pdf
31RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer1e-12-2.945e+010.0000870.06.70%1807.25.21%motif file (matrix) pdf
32STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer1e-12-2.851e+010.00004839.037.24%11868.234.24%motif file (matrix) pdf
33Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer1e-12-2.807e+010.000012090.093.04%31662.691.34%motif file (matrix) pdf
34Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer1e-11-2.692e+010.0000948.07.30%2016.65.82%motif file (matrix) pdf
35EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer1e-11-2.607e+010.00009238.071.09%23687.068.33%motif file (matrix) pdf
36MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer1e-10-2.487e+010.00007928.061.01%20155.658.15%motif file (matrix) pdf
37Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer1e-10-2.334e+010.00006501.050.03%16367.747.22%motif file (matrix) pdf
38TATA-Box(TBP)/Promoter/Homer1e-9-2.231e+010.00009019.069.41%23169.366.84%motif file (matrix) pdf
39Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer1e-9-2.194e+010.000012804.098.54%33894.297.78%motif file (matrix) pdf
40EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer1e-9-2.154e+010.00008259.063.56%21125.360.94%motif file (matrix) pdf
41HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer1e-9-2.149e+010.00008266.063.61%21145.861.00%motif file (matrix) pdf
42GFX(?)/Promoter/Homer1e-9-2.146e+010.0000175.01.35%283.70.82%motif file (matrix) pdf
43Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer1e-9-2.122e+010.00007523.057.90%19150.855.25%motif file (matrix) pdf
44Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer1e-9-2.109e+010.00009382.072.20%24187.369.78%motif file (matrix) pdf
45Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer1e-8-2.065e+010.00001786.013.74%4160.212.00%motif file (matrix) pdf
46EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer1e-8-2.039e+010.00005055.038.90%12610.636.38%motif file (matrix) pdf
47JunD(bZIP)/K562-JunD-ChIP-Seq/Homer1e-8-1.927e+010.0000761.05.86%1644.14.74%motif file (matrix) pdf
48Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer1e-8-1.878e+010.00002646.020.36%6380.518.41%motif file (matrix) pdf
49E2F(E2F)/Hela-CellCycle-Expression/Homer1e-8-1.872e+010.0000705.05.43%1515.44.37%motif file (matrix) pdf
50MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer1e-8-1.860e+010.00006387.049.15%16180.546.68%motif file (matrix) pdf
51Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer1e-7-1.818e+010.000011330.087.19%29636.885.50%motif file (matrix) pdf
52PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer1e-7-1.780e+010.00009581.073.73%24808.771.57%motif file (matrix) pdf
53Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer1e-7-1.748e+010.000012756.098.17%33778.297.45%motif file (matrix) pdf
54AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer1e-7-1.699e+010.00007532.057.97%19283.155.63%motif file (matrix) pdf
55CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer1e-7-1.645e+010.000011794.090.76%30977.889.37%motif file (matrix) pdf
56STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer1e-7-1.636e+010.00002984.022.96%7303.021.07%motif file (matrix) pdf
57Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer1e-7-1.635e+010.00008463.065.13%21808.162.91%motif file (matrix) pdf
58Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo et al.)/Homer1e-6-1.596e+010.00005664.043.59%14332.941.35%motif file (matrix) pdf
59IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer1e-6-1.593e+010.00004143.031.88%10328.329.80%motif file (matrix) pdf
60Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer1e-6-1.558e+010.000010446.080.39%27235.878.57%motif file (matrix) pdf
61Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer1e-6-1.524e+010.00009363.072.06%24279.670.04%motif file (matrix) pdf
62HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer1e-6-1.510e+010.00003598.027.69%8926.625.75%motif file (matrix) pdf
63Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer1e-6-1.429e+010.00004944.038.05%12477.936.00%motif file (matrix) pdf
64MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer1e-5-1.373e+010.00005865.045.14%14930.643.07%motif file (matrix) pdf
65X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer1e-5-1.372e+010.00001039.08.00%2397.26.92%motif file (matrix) pdf
66E-box(bHLH)/Promoter/Homer1e-5-1.359e+010.0000874.06.73%1989.15.74%motif file (matrix) pdf
67GATA3(Zf),DR8/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer1e-5-1.296e+010.0000781.06.01%1768.65.10%motif file (matrix) pdf
68SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer1e-5-1.289e+010.00002468.018.99%6050.517.45%motif file (matrix) pdf
69STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer1e-5-1.278e+010.00003230.024.86%8028.323.16%motif file (matrix) pdf
70PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer1e-5-1.262e+010.00003955.030.44%9926.328.64%motif file (matrix) pdf
71NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer1e-5-1.218e+010.000010498.080.79%27464.879.23%motif file (matrix) pdf
72SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer1e-5-1.188e+010.000012828.098.72%34053.398.24%motif file (matrix) pdf
73AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer1e-5-1.172e+010.000012686.097.63%33624.697.00%motif file (matrix) pdf
74Tcfcp2l1(CP2)/mES-Tcfcp2l1-ChIP-Seq(GSE11431)/Homer1e-5-1.171e+010.00001343.010.34%3196.89.22%motif file (matrix) pdf
75E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer1e-5-1.162e+010.00003248.025.00%8107.823.39%motif file (matrix) pdf
76ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer1e-5-1.160e+010.0000573.04.41%1275.53.68%motif file (matrix) pdf
77HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer1e-5-1.159e+010.00004146.031.91%10458.130.17%motif file (matrix) pdf
78STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer1e-5-1.157e+010.00007378.056.78%19034.554.91%motif file (matrix) pdf
79GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer1e-4-1.150e+010.00003351.025.79%8380.024.18%motif file (matrix) pdf
80PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer1e-4-1.079e+010.00014398.033.85%11146.632.16%motif file (matrix) pdf
81PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer1e-4-1.049e+010.00012834.021.81%7061.920.37%motif file (matrix) pdf
82Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer1e-4-1.041e+010.00011927.014.83%4716.813.61%motif file (matrix) pdf
83Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer1e-4-1.035e+010.00015775.044.44%14802.642.70%motif file (matrix) pdf
84Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer1e-4-1.023e+010.00011898.014.61%4646.713.41%motif file (matrix) pdf
85CHR(?)/Hela-CellCycle-Expression/Homer1e-4-1.013e+010.00015838.044.93%14977.243.21%motif file (matrix) pdf
86Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer1e-4-1.006e+010.00015954.045.82%15288.844.11%motif file (matrix) pdf
87Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer1e-4-1.005e+010.000110122.077.90%26497.776.44%motif file (matrix) pdf
88IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer1e-4-9.782e+000.00021551.011.94%3766.110.86%motif file (matrix) pdf
89ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer1e-4-9.265e+000.00039083.069.90%23703.868.38%motif file (matrix) pdf
90Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer1e-3-9.174e+000.00039822.075.59%25709.174.17%motif file (matrix) pdf
91Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer1e-3-8.377e+000.00074240.032.63%10814.831.20%motif file (matrix) pdf
92TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer1e-3-8.298e+000.00076907.053.16%17895.251.63%motif file (matrix) pdf
93Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer1e-3-8.178e+000.00084604.035.43%11782.633.99%motif file (matrix) pdf
94Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer1e-3-8.050e+000.000910095.077.69%26490.976.42%motif file (matrix) pdf
95HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer1e-3-8.043e+000.00092727.020.99%6857.819.78%motif file (matrix) pdf
96Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer1e-3-8.042e+000.00093016.023.21%7612.921.96%motif file (matrix) pdf
97Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer1e-3-7.973e+000.00092504.019.27%6278.818.11%motif file (matrix) pdf
98Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan et al.)/Homer1e-3-7.886e+000.001010755.082.77%28295.881.63%motif file (matrix) pdf
99Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer1e-3-7.858e+000.001012181.093.74%32236.393.00%motif file (matrix) pdf
100Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer1e-3-7.544e+000.00146942.053.42%18020.451.99%motif file (matrix) pdf
101E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer1e-3-7.539e+000.00141713.013.18%4239.012.23%motif file (matrix) pdf
102GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer1e-3-7.475e+000.0015799.06.15%1901.55.49%motif file (matrix) pdf
103IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer1e-3-7.333e+000.00171136.08.74%2761.37.97%motif file (matrix) pdf
104GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer1e-3-7.024e+000.00239210.070.88%24132.569.62%motif file (matrix) pdf
105Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer1e-3-6.948e+000.00247548.058.09%19668.056.74%motif file (matrix) pdf
106Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer1e-2-6.584e+000.003412664.097.46%33630.397.02%motif file (matrix) pdf
107Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer1e-2-6.551e+000.00352365.018.20%5963.317.20%motif file (matrix) pdf
108ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer1e-2-6.518e+000.003610803.083.14%28473.882.14%motif file (matrix) pdf
109Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer1e-2-6.490e+000.00378210.063.18%21463.961.92%motif file (matrix) pdf
110EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer1e-2-6.457e+000.00386051.046.57%15693.145.27%motif file (matrix) pdf
111PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer1e-2-6.457e+000.003811132.085.67%29374.984.74%motif file (matrix) pdf
112TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer1e-2-6.451e+000.00381123.08.64%2749.67.93%motif file (matrix) pdf
113Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer1e-2-6.425e+000.00381862.014.33%4658.413.44%motif file (matrix) pdf
114BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer1e-2-6.241e+000.00454751.036.56%12252.735.35%motif file (matrix) pdf
115NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer1e-2-6.196e+000.00476676.051.38%17371.550.11%motif file (matrix) pdf
116Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer1e-2-6.167e+000.00484718.036.31%12168.335.10%motif file (matrix) pdf
117NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer1e-2-6.087e+000.00517123.054.82%18570.253.57%motif file (matrix) pdf
118RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer1e-2-5.744e+000.00727445.057.30%19448.656.11%motif file (matrix) pdf
119AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer1e-2-5.729e+000.00725276.040.60%13668.439.43%motif file (matrix) pdf
120Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer1e-2-5.689e+000.007412146.093.47%32190.892.87%motif file (matrix) pdf
121Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer1e-2-5.286e+000.01105213.040.12%13523.339.01%motif file (matrix) pdf
122Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer1e-2-5.087e+000.01342412.018.56%6142.017.72%motif file (matrix) pdf
123KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer1e-2-4.963e+000.01509702.074.67%25552.473.72%motif file (matrix) pdf
124NFY(CCAAT)/Promoter/Homer1e-2-4.958e+000.01506055.046.60%15779.245.52%motif file (matrix) pdf
125Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer1e-2-4.918e+000.01548060.062.03%21138.060.98%motif file (matrix) pdf
126NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer1e-2-4.857e+000.0163622.04.79%1506.74.35%motif file (matrix) pdf
127GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer1e-2-4.804e+000.01701983.015.26%5030.014.51%motif file (matrix) pdf