Homer Known Motif Enrichment Results (output_directory/)

Homer de novo Motif Results
Gene Ontology Enrichment Results
Known Motif Enrichment Results (txt file)
Total Target Sequences = 543, Total Background Sequences = 43082
RankMotifNameP-valuelog P-pvalueq-value (Benjamini)# Target Sequences with Motif% of Targets Sequences with Motif# Background Sequences with Motif% of Background Sequences with MotifMotif File SVG
1 G T C A T C G A C T A G C T A G A G T C G T C A C G A T C T A G G A C T G A T C G A T C T C A G C T A G C T G A A G T C G C T A C A G T T C A G G A T C G A T C p63(p53)/Keratinocyte-p63-ChIP-Seq(GSE17611)/Homer1e-316-7.294e+020.0000283.052.12%896.12.08%motif file (matrix) svg
2 T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G NFY(CCAAT)/Promoter/Homer1e-267-6.153e+020.0000357.065.75%3037.47.04%motif file (matrix) svg
3 A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer1e-253-5.833e+020.0000368.067.77%3682.68.53%motif file (matrix) svg
4 C G T A C T G A C T A G C T G A A G T C G C T A C G A T A T C G G A C T G A T C A G T C C T G A C T A G C T A G A G T C G C T A C G A T C T A G G A T C G A T C p73(p53)/Trachea-p73-ChIP-Seq(PRJNA310161)/Homer1e-252-5.813e+020.0000146.026.89%95.70.22%motif file (matrix) svg
5 A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer1e-251-5.793e+020.0000395.072.74%4683.310.85%motif file (matrix) svg
6 T G C A T C G A T C G A A C G T C A T G C G T A A G T C T C A G A C G T G T A C C G T A A G C T CREB5(bZIP)/LNCaP-CREB5.V5-ChIP-Seq(GSE137775)/Homer1e-244-5.635e+020.0000261.048.07%1233.52.86%motif file (matrix) svg
7 A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer1e-242-5.574e+020.0000381.070.17%4427.610.26%motif file (matrix) svg
8 C T A G C T G A A G T C G C T A C G A T A C T G G A C T G A T C G A T C C T G A C T A G C T G A T G A C G C T A C G A T T C A G G A C T G A T C G A T C T G A C p53(p53)/Saos-p53-ChIP-Seq(GSE15780)/Homer1e-229-5.290e+020.0000164.030.20%233.20.54%motif file (matrix) svg
9 C T A G C T G A A G T C G C T A C G A T A C T G G A C T G A T C G A T C C T G A C T A G C T G A T G A C G C T A C G A T T C A G G A C T G A T C G A T C T G A C p53(p53)/Saos-p53-ChIP-Seq/Homer1e-229-5.290e+020.0000164.030.20%233.20.54%motif file (matrix) svg
10 C T G A T G C A T A G C T G A C T A C G T C A G C T G A G C T A T C A G G A C T ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer1e-229-5.278e+020.0000265.048.80%1496.03.47%motif file (matrix) svg
11 T A C G C T G A C A T G G A T C G T A C G C A T T C A G T A C G A G C T G T C A G A T C G C A T T A C G C G T A C T A G G A T C G A T C C G A T A C T G T C A G ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer1e-218-5.022e+020.0000202.037.20%635.81.47%motif file (matrix) svg
12 C G T A T A C G T C G A A C T G A C T G C G T A C G T A T A C G A G C T T A C G PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer1e-214-4.933e+020.0000288.053.04%2242.25.20%motif file (matrix) svg
13 A G T C G A C T A G C T C G A T A T C G G C T A C G A T A T C G C G A T A C T G T A C G A C G T Tcf7(HMG)/GM12878-TCF7-ChIP-Seq(Encode)/Homer1e-214-4.928e+020.0000261.048.07%1633.63.79%motif file (matrix) svg
14 G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer1e-202-4.659e+020.0000285.052.49%2399.15.56%motif file (matrix) svg
15 C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer1e-201-4.637e+020.0000389.071.64%6103.714.14%motif file (matrix) svg
16 A T G C A G T C A G C T A G C T A C G T A T C G C G T A C G A T T A G C G A C T LEF1(HMG)/H1-LEF1-ChIP-Seq(GSE64758)/Homer1e-197-4.538e+020.0000320.058.93%3553.48.23%motif file (matrix) svg
17 T A G C T A G C G C A T C A T G A C T G G C T A C G T A A C G T A C T G G A T C TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer1e-194-4.473e+020.0000327.060.22%3869.98.97%motif file (matrix) svg
18 T C G A T C G A T A G C G T A C T C A G T A C G C G T A C G T A T C A G A G C T GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer1e-194-4.470e+020.0000314.057.83%3438.57.97%motif file (matrix) svg
19 C G T A T A G C T A G C T G C A A C T G C T A G C G T A C G T A T C A G G A C T EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer1e-192-4.423e+020.0000399.073.48%6963.716.14%motif file (matrix) svg
20 C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer1e-181-4.172e+020.0000276.050.83%2619.06.07%motif file (matrix) svg
21 T A G C C T A G T C G A G A C T A C T G C T G A A G T C T C A G G C A T T G A C C T G A A G C T Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer1e-179-4.133e+020.0000223.041.07%1383.63.21%motif file (matrix) svg
22 G C T A A G T C T A C G T G C A A T C G T C A G G C T A T C G A T C A G A G C T ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer1e-179-4.127e+020.0000312.057.46%3795.08.79%motif file (matrix) svg
23 C G T A T G A C T A G C T G C A A C T G A C T G C G T A C G T A T C A G G A C T ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer1e-173-3.998e+020.0000310.057.09%3898.99.04%motif file (matrix) svg
24 T C G A T A G C T G C A A C T G A C T G C G T A C G T A C T A G G A C T T A C G ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer1e-170-3.928e+020.0000315.058.01%4176.29.68%motif file (matrix) svg
25 A T G C A G T C C T G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G G A C T A C G T Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer1e-169-3.904e+020.0000306.056.35%3885.49.00%motif file (matrix) svg
26 A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer1e-169-3.894e+020.0000402.074.03%8201.819.01%motif file (matrix) svg
27 C T G A A G T C C G A T A G C T A T G C G T A C A C G T A T C G C A G T G C A T Elf4(ETS)/BMDM-Elf4-ChIP-Seq(GSE88699)/Homer1e-162-3.746e+020.0000320.058.93%4639.110.75%motif file (matrix) svg
28 A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer1e-159-3.675e+020.0000406.074.77%8937.620.71%motif file (matrix) svg
29 T A C G T C G A G A C T A C T G C T G A A G T C T C A G G A C T T G A C C T G A Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer1e-158-3.645e+020.0000244.044.94%2269.65.26%motif file (matrix) svg
30 A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer1e-148-3.422e+020.0000406.074.77%9570.022.18%motif file (matrix) svg
31 T G A C A G T C C T G A T G A C C G T A A C G T A C G T A G T C A G T C C G T A TEAD1(TEAD)/HepG2-TEAD1-ChIP-Seq(Encode)/Homer1e-148-3.409e+020.0000311.057.27%4837.011.21%motif file (matrix) svg
32 A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A T G C G A C T A C T G T A C G Sox21(HMG)/ESC-SOX21-ChIP-Seq(GSE110505)/Homer1e-146-3.369e+020.0000403.074.22%9526.922.08%motif file (matrix) svg
33 T C G A C T G A T A G C T G A C T C A G T C A G C G T A C G T A T C A G A G C T ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer1e-140-3.226e+020.0000322.059.30%5638.113.07%motif file (matrix) svg
34 A G T C C T G A A G T C C G A T C A G T G A T C A T G C A C T G A T C G G A C T Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer1e-138-3.180e+020.0000281.051.75%4048.79.38%motif file (matrix) svg
35 C G T A G A C T C G A T A T C G G T A C G C A T C A T G C G T A T A C G G C A T G T A C C G T A C A T G A T G C G C T A C T A G G C A T G C A T G C A T G A C T MafB(bZIP)/BMM-Mafb-ChIP-Seq(GSE75722)/Homer1e-135-3.112e+020.0000186.034.25%1341.23.11%motif file (matrix) svg
36 A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer1e-133-3.076e+020.0000412.075.87%10917.525.30%motif file (matrix) svg
37 A G C T C T A G T G A C C G T A A C G T C G A T A G T C A G T C C T G A C A T G TEAD3(TEA)/HepG2-TEAD3-ChIP-Seq(Encode)/Homer1e-128-2.949e+020.0000311.057.27%5704.313.22%motif file (matrix) svg
38 T C G A T A G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T T C A G ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer1e-113-2.610e+020.0000325.059.85%7155.416.58%motif file (matrix) svg
39 T G A C C T A G T C A G G T C A C G T A T C A G C G A T T C A G T C G A T G C A C T G A T A G C PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer1e-92-2.135e+020.0000309.056.91%7612.817.64%motif file (matrix) svg
40 C A G T T C A G A G C T G A C T A C G T A G T C G A T C G A C T C T G A A C T G G A T C C G T A C T G A A G T C G T A C Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer1e-82-1.904e+020.0000210.038.67%3621.58.39%motif file (matrix) svg
41 G A C T T C G A C G A T T A C G C T A G T A C G A C T G A T G C G T A C G T A C Zac1(Zf)/Neuro2A-Plagl1-ChIP-Seq(GSE75942)/Homer1e-72-1.668e+020.0000305.056.17%8921.620.67%motif file (matrix) svg
42 G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer1e-58-1.349e+020.0000212.039.04%5079.011.77%motif file (matrix) svg
43 T G A C T C G A C T G A C T G A A T G C G A T C C T A G T A C G G A C T G A C T G A T C T C G A C T G A C T G A A T G C G A T C C T A G A T C G G A C T G A C T Tcfcp2l1(CP2)/mES-Tcfcp2l1-ChIP-Seq(GSE11431)/Homer1e-57-1.316e+020.000067.012.34%323.30.75%motif file (matrix) svg
44 T G A C C T G A C T A G T C G A C T G A A T G C C G T A A C T G G C A T G T A C G C A T A T C G G C A T A G C T G A T C PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer1e-56-1.296e+020.0000282.051.93%9025.620.92%motif file (matrix) svg
45 T A G C G A T C G T A C C T G A G C A T C T G A C G T A T G C A C G T A G A T C Hoxa13(Homeobox)/ChickenMSG-Hoxa13.Flag-ChIP-Seq(GSE86088)/Homer1e-43-1.012e+020.0000366.067.40%16255.537.67%motif file (matrix) svg
46 G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer1e-42-9.800e+010.0000363.066.85%16225.137.60%motif file (matrix) svg
47 C G A T G A C T C G A T T C A G G A C T A C G T C A G T C T G A G A C T G A C T A G C T C G A T A C T G A T C G G T A C G C T A NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer1e-35-8.125e+010.000045.08.29%256.80.60%motif file (matrix) svg
48 C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer1e-26-6.058e+010.0000130.023.94%3692.08.56%motif file (matrix) svg
49 C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer1e-24-5.605e+010.0000292.053.78%13928.432.28%motif file (matrix) svg
50 C G T A A C G T A C G T A C G T A C G T A G T C A G T C C T G A A G C T A G C T NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer1e-16-3.820e+010.0000134.024.68%5018.711.63%motif file (matrix) svg
51 C G T A C G T A A G C T G A C T T G C A G T C A A C G T A G C T C T G A T C A G Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer1e-15-3.543e+010.0000210.038.67%9981.923.13%motif file (matrix) svg
52 A T G C A G T C G C T A C G A T C G T A G C A T G C T A C G A T C T A G C A T G T G A C G T C A CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer1e-13-3.171e+010.000062.011.42%1617.33.75%motif file (matrix) svg
53 C T A G G A C T G A T C A C G T A T C G A G C T C T G A A T C G C G A T C T A G G A T C G A C T C A T G A T C G G T A C G A C T A G T C G C A T A G C T C G A T ZNF382(Zf)/HEK293-ZNF382.GFP-ChIP-Seq(GSE58341)/Homer1e-13-3.100e+010.000015.02.76%69.60.16%motif file (matrix) svg
54 C T G A C T A G T C G A C G T A A T G C C G T A A T C G C G A T T A G C G C A T A T C G G C A T A G C T G A T C G A C T A G C T ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer1e-11-2.699e+010.000037.06.81%728.91.69%motif file (matrix) svg
55 T C A G C T A G A T G C G A C T T G C A C G T A A G C T A C G T C T G A T A C G En1(Homeobox)/SUM149-EN1-ChIP-Seq(GSE120957)/Homer1e-11-2.613e+010.0000202.037.20%10350.123.98%motif file (matrix) svg
56 C G T A C T G A C T A G C G T A C G T A A G T C C G T A C A G T G C A T G T C A C G A T A C T G A C G T G C A T G A T C PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer1e-11-2.540e+010.000042.07.73%970.72.25%motif file (matrix) svg
57 T G A C T A G C T C A G T C G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T A C G Sox7(HMG)/ESC-Sox7-ChIP-Seq(GSE133899)/Homer1e-9-2.215e+010.000048.08.84%1352.03.13%motif file (matrix) svg
58 C T A G C G T A G T C A C G T A A G T C G A T C A G C T C T A G C G T A A C G T G T C A G A T C Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer1e-8-1.922e+010.0000107.019.71%4813.911.16%motif file (matrix) svg
59 T A C G C T G A C T A G T C G A C G T A A G T C C T G A A T C G G C A T T A G C G A C T A C T G A C G T A G C T A G T C G A C T GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer1e-7-1.695e+010.000021.03.87%388.90.90%motif file (matrix) svg
60 C T G A T A G C G C T A C G A T A T C G A G T C G A T C G A T C C T A G T C A G T C A G G T A C G C T A C A G T p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer1e-6-1.566e+010.00009.01.66%63.20.15%motif file (matrix) svg
61 T G A C C T G A C T A G C T G A C G T A A G T C C T G A A C G T G C A T T A G C G C A T A T C G G A C T G A C T G A T C GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer1e-6-1.413e+010.000028.05.16%761.61.76%motif file (matrix) svg
62 T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer1e-5-1.377e+010.000037.06.81%1209.82.80%motif file (matrix) svg
63 T A C G T C A G G A T C G T A C T C G A G A C T G C T A G C T A G C T A C G T A G A T C G T C A CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer1e-5-1.316e+010.0000108.019.89%5504.812.76%motif file (matrix) svg
64 T G C A T C G A T A G C G T A C T C A G C T A G G T C A G C T A T C A G G A C T ETS(ETS)/Promoter/Homer1e-5-1.173e+010.000131.05.71%1014.42.35%motif file (matrix) svg
65 C A T G A G T C A G C T C G T A C G A T C G A T G C A T G C A T C G A T C T G A C A T G T G A C Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer1e-3-8.431e+000.001528.05.16%1051.72.44%motif file (matrix) svg
66 C T A G C A T G T G C A A C G T A G T C C G T A C A T G T C A G A C G T A C G T G C T A A G T C Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer1e-3-7.552e+000.003526.04.79%1001.22.32%motif file (matrix) svg
67 A T G C T C A G T C G A G C A T A C T G C G T A A G T C T C A G G A C T T G A C C G T A A G C T Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer1e-3-7.295e+000.004521.03.87%748.11.73%motif file (matrix) svg
68 G A C T A G C T G T A C G A C T C T G A A C T G G T C A C T G A A T G C T A C G G A C T A C G T A G T C G A C T C T G A HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer1e-3-7.035e+000.005725.04.60%982.32.28%motif file (matrix) svg
69 T C G A A C G T A C T G C T G A A G T C T C A G A G C T G T A C C G T A A G C T G A T C T C G A JunD(bZIP)/K562-JunD-ChIP-Seq/Homer1e-2-4.915e+000.04686.01.10%133.90.31%motif file (matrix) svg
70 C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer1e-2-4.846e+000.049430.05.52%1476.13.42%motif file (matrix) svg