| Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
| 1 |
| Lhx1(Homeobox)/EmbryoCarcinoma-Lhx1-ChIP-Seq(GSE70957)/Homer | 1e-10 | -2.520e+01 | 0.0000 | 89.0 | 29.57% | 6675.2 | 14.39% | motif file (matrix) |
svg |
| 2 |
| Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer | 1e-9 | -2.188e+01 | 0.0000 | 81.0 | 26.91% | 6177.3 | 13.32% | motif file (matrix) |
svg |
| 3 |
| LHX9(Homeobox)/Hct116-LHX9.V5-ChIP-Seq(GSE116822)/Homer | 1e-9 | -2.119e+01 | 0.0000 | 94.0 | 31.23% | 7804.7 | 16.83% | motif file (matrix) |
svg |
| 4 |
| Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer | 1e-8 | -1.993e+01 | 0.0000 | 103.0 | 34.22% | 9112.0 | 19.65% | motif file (matrix) |
svg |
| 5 |
| Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer | 1e-8 | -1.897e+01 | 0.0000 | 107.0 | 35.55% | 9784.8 | 21.10% | motif file (matrix) |
svg |
| 6 |
| Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer | 1e-7 | -1.818e+01 | 0.0000 | 144.0 | 47.84% | 14937.2 | 32.21% | motif file (matrix) |
svg |
| 7 |
| NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer | 1e-7 | -1.651e+01 | 0.0000 | 84.0 | 27.91% | 7314.2 | 15.77% | motif file (matrix) |
svg |
| 8 |
| DLX2(Homeobox)/BasalGanglia-Dlx2-ChIP-seq(GSE124936)/Homer | 1e-7 | -1.631e+01 | 0.0000 | 96.0 | 31.89% | 8849.3 | 19.08% | motif file (matrix) |
svg |
| 9 |
| En1(Homeobox)/SUM149-EN1-ChIP-Seq(GSE120957)/Homer | 1e-6 | -1.558e+01 | 0.0000 | 107.0 | 35.55% | 10415.3 | 22.46% | motif file (matrix) |
svg |
| 10 |
| DLX5(Homeobox)/BasalGanglia-Dlx5-ChIP-seq(GSE124936)/Homer | 1e-6 | -1.543e+01 | 0.0000 | 59.0 | 19.60% | 4533.6 | 9.78% | motif file (matrix) |
svg |
| 11 |
| BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer | 1e-6 | -1.514e+01 | 0.0000 | 79.0 | 26.25% | 6930.7 | 14.95% | motif file (matrix) |
svg |
| 12 |
| Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer | 1e-6 | -1.419e+01 | 0.0000 | 57.0 | 18.94% | 4478.4 | 9.66% | motif file (matrix) |
svg |
| 13 |
| NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer | 1e-6 | -1.418e+01 | 0.0000 | 77.0 | 25.58% | 6849.3 | 14.77% | motif file (matrix) |
svg |
| 14 |
| Dlx3(Homeobox)/Kerainocytes-Dlx3-ChIP-Seq(GSE89884)/Homer | 1e-6 | -1.410e+01 | 0.0000 | 52.0 | 17.28% | 3930.6 | 8.48% | motif file (matrix) |
svg |
| 15 |
| TCF4(bHLH)/SHSY5Y-TCF4-ChIP-Seq(GSE96915)/Homer | 1e-5 | -1.277e+01 | 0.0001 | 75.0 | 24.92% | 6855.6 | 14.78% | motif file (matrix) |
svg |
| 16 |
| Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer | 1e-4 | -1.145e+01 | 0.0003 | 135.0 | 44.85% | 15259.1 | 32.91% | motif file (matrix) |
svg |
| 17 |
| Twist2(bHLH)/Myoblast-Twist2.Ty1-ChIP-Seq(GSE127998)/Homer | 1e-4 | -1.125e+01 | 0.0003 | 82.0 | 27.24% | 8047.6 | 17.35% | motif file (matrix) |
svg |
| 18 |
| NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer | 1e-4 | -1.019e+01 | 0.0009 | 41.0 | 13.62% | 3246.2 | 7.00% | motif file (matrix) |
svg |
| 19 |
| Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer | 1e-4 | -9.874e+00 | 0.0012 | 125.0 | 41.53% | 14271.3 | 30.78% | motif file (matrix) |
svg |
| 20 |
| BHLHA15(bHLH)/NIH3T3-BHLHB8.HA-ChIP-Seq(GSE119782)/Homer | 1e-4 | -9.666e+00 | 0.0014 | 63.0 | 20.93% | 5962.8 | 12.86% | motif file (matrix) |
svg |
| 21 |
| HIC1(Zf)/Treg-ZBTB29-ChIP-Seq(GSE99889)/Homer | 1e-3 | -9.121e+00 | 0.0023 | 83.0 | 27.57% | 8673.8 | 18.70% | motif file (matrix) |
svg |
| 22 |
| Tbx6(T-box)/ESC-Tbx6-ChIP-Seq(GSE93524)/Homer | 1e-3 | -7.881e+00 | 0.0076 | 43.0 | 14.29% | 3858.8 | 8.32% | motif file (matrix) |
svg |
| 23 |
| DLX1(Homeobox)/BasalGanglia-Dlx1-ChIP-seq(GSE124936)/Homer | 1e-3 | -7.298e+00 | 0.0130 | 73.0 | 24.25% | 7818.7 | 16.86% | motif file (matrix) |
svg |
| 24 |
| Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer | 1e-3 | -7.231e+00 | 0.0133 | 66.0 | 21.93% | 6908.7 | 14.90% | motif file (matrix) |
svg |
| 25 |
| GATA:SCL(Zf,bHLH)/Ter119-SCL-ChIP-Seq(GSE18720)/Homer | 1e-3 | -6.914e+00 | 0.0175 | 9.0 | 2.99% | 381.9 | 0.82% | motif file (matrix) |
svg |
| 26 |
| Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer | 1e-2 | -6.528e+00 | 0.0247 | 58.0 | 19.27% | 6043.4 | 13.03% | motif file (matrix) |
svg |
| 27 |
| Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer | 1e-2 | -5.992e+00 | 0.0407 | 58.0 | 19.27% | 6187.6 | 13.34% | motif file (matrix) |
svg |
| 28 |
| OCT:OCT(POU,Homeobox,IR1)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer | 1e-2 | -5.967e+00 | 0.0407 | 4.0 | 1.33% | 86.8 | 0.19% | motif file (matrix) |
svg |
| 29 |
| Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer | 1e-2 | -5.855e+00 | 0.0435 | 40.0 | 13.29% | 3904.7 | 8.42% | motif file (matrix) |
svg |
| 30 |
| Oct11(POU,Homeobox)/NCIH1048-POU2F3-ChIP-seq(GSE115123)/Homer | 1e-2 | -5.743e+00 | 0.0470 | 24.0 | 7.97% | 2002.9 | 4.32% | motif file (matrix) |
svg |
| 31 |
| Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer | 1e-2 | -5.581e+00 | 0.0535 | 62.0 | 20.60% | 6839.8 | 14.75% | motif file (matrix) |
svg |
| 32 |
| SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer | 1e-2 | -5.535e+00 | 0.0543 | 157.0 | 52.16% | 20571.5 | 44.36% | motif file (matrix) |
svg |
| 33 |
| Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer | 1e-2 | -5.246e+00 | 0.0702 | 23.0 | 7.64% | 1969.4 | 4.25% | motif file (matrix) |
svg |
| 34 |
| HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer | 1e-2 | -5.162e+00 | 0.0742 | 42.0 | 13.95% | 4325.0 | 9.33% | motif file (matrix) |
svg |
| 35 |
| Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer | 1e-2 | -5.082e+00 | 0.0780 | 83.0 | 27.57% | 9900.5 | 21.35% | motif file (matrix) |
svg |
| 36 |
| Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer | 1e-2 | -5.015e+00 | 0.0811 | 28.0 | 9.30% | 2605.6 | 5.62% | motif file (matrix) |
svg |
| 37 |
| Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer | 1e-2 | -4.839e+00 | 0.0941 | 44.0 | 14.62% | 4669.0 | 10.07% | motif file (matrix) |
svg |