Homer Known Motif Enrichment Results (All_peak/)

Homer de novo Motif Results
Gene Ontology Enrichment Results
Known Motif Enrichment Results (txt file)
Total Target Sequences = 4865, Total Background Sequences = 44443
RankMotifNameP-valuelog P-pvalueq-value (Benjamini)# Target Sequences with Motif% of Targets Sequences with Motif# Background Sequences with Motif% of Background Sequences with MotifMotif File PDF
1CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski et al.)/Homer1e-196-4.516e+020.0000307.06.31%271.10.61%motif file (matrix) pdf
2BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer1e-131-3.026e+020.0000328.06.74%544.01.22%motif file (matrix) pdf
3Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer1e-89-2.066e+020.00001940.039.86%11794.226.55%motif file (matrix) pdf
4Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer1e-80-1.852e+020.00002267.046.58%14821.633.37%motif file (matrix) pdf
5Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer1e-55-1.271e+020.0000723.014.86%3582.28.07%motif file (matrix) pdf
6Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer1e-48-1.106e+020.00001258.025.85%7749.917.45%motif file (matrix) pdf
7Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer1e-37-8.721e+010.00001115.022.91%7007.115.78%motif file (matrix) pdf
8Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer1e-37-8.569e+010.00001114.022.89%7025.915.82%motif file (matrix) pdf
9Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer1e-31-7.188e+010.0000814.016.72%4932.911.11%motif file (matrix) pdf
10Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer1e-26-6.087e+010.00001166.023.96%7917.517.83%motif file (matrix) pdf
11Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer1e-25-5.846e+010.00001253.025.74%8683.119.55%motif file (matrix) pdf
12Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer1e-25-5.775e+010.00001610.033.08%11690.626.32%motif file (matrix) pdf
13Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer1e-22-5.235e+010.0000602.012.37%3641.98.20%motif file (matrix) pdf
14Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer1e-20-4.813e+010.00001651.033.92%12305.827.71%motif file (matrix) pdf
15TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer1e-17-4.117e+010.0000542.011.14%3377.17.60%motif file (matrix) pdf
16Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer1e-16-3.912e+010.00002272.046.68%18057.340.66%motif file (matrix) pdf
17SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer1e-16-3.687e+010.00002236.045.94%17817.940.12%motif file (matrix) pdf
18RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer1e-15-3.501e+010.000067.01.38%190.80.43%motif file (matrix) pdf
19Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer1e-13-3.133e+010.000069.01.42%217.00.49%motif file (matrix) pdf
20NFY(CCAAT)/Promoter/Homer1e-12-2.773e+010.0000426.08.75%2741.76.17%motif file (matrix) pdf
21TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer1e-11-2.627e+010.0000345.07.09%2149.74.84%motif file (matrix) pdf
22TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer1e-10-2.530e+010.0000451.09.27%2987.16.73%motif file (matrix) pdf
23MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer1e-8-2.044e+010.0000397.08.16%2673.46.02%motif file (matrix) pdf
24OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer1e-8-1.995e+010.0000153.03.14%837.91.89%motif file (matrix) pdf
25Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer1e-7-1.814e+010.0000495.010.17%3519.17.92%motif file (matrix) pdf
26Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer1e-7-1.790e+010.0000614.012.62%4503.610.14%motif file (matrix) pdf
27Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer1e-7-1.772e+010.0000524.010.77%3769.08.49%motif file (matrix) pdf
28NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer1e-7-1.738e+010.0000409.08.40%2845.36.41%motif file (matrix) pdf
29X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer1e-7-1.676e+010.000073.01.50%332.50.75%motif file (matrix) pdf
30Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer1e-7-1.662e+010.0000657.013.50%4904.011.04%motif file (matrix) pdf
31Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer1e-7-1.620e+010.0000319.06.55%2158.04.86%motif file (matrix) pdf
32MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer1e-7-1.615e+010.0000401.08.24%2814.96.34%motif file (matrix) pdf
33MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer1e-6-1.558e+010.0000523.010.75%3827.98.62%motif file (matrix) pdf
34NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer1e-6-1.497e+010.000070.01.44%329.30.74%motif file (matrix) pdf
35Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer1e-6-1.444e+010.0000519.010.66%3832.28.63%motif file (matrix) pdf
36Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer1e-6-1.433e+010.0000356.07.31%2502.95.64%motif file (matrix) pdf
37Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer1e-5-1.349e+010.0000129.02.65%757.51.71%motif file (matrix) pdf
38EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer1e-5-1.345e+010.0000515.010.58%3833.38.63%motif file (matrix) pdf
39Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer1e-5-1.271e+010.0000105.02.16%595.81.34%motif file (matrix) pdf
40Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer1e-5-1.220e+010.0000287.05.90%2006.44.52%motif file (matrix) pdf
41Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer1e-5-1.207e+010.00001394.028.64%11481.425.85%motif file (matrix) pdf
42Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer1e-5-1.182e+010.0000264.05.42%1833.04.13%motif file (matrix) pdf
43Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer1e-5-1.159e+010.0001966.019.85%7759.017.47%motif file (matrix) pdf
44ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer1e-4-1.131e+010.0001630.012.94%4885.911.00%motif file (matrix) pdf
45MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer1e-4-1.129e+010.0001852.017.51%6788.915.29%motif file (matrix) pdf
46Tcfcp2l1(CP2)/mES-Tcfcp2l1-ChIP-Seq(GSE11431)/Homer1e-4-1.072e+010.000164.01.31%333.50.75%motif file (matrix) pdf
47Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer1e-4-1.066e+010.0001170.03.49%1119.22.52%motif file (matrix) pdf
48Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer1e-4-1.052e+010.0001301.06.18%2168.34.88%motif file (matrix) pdf
49SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer1e-4-1.051e+010.0001497.010.21%3794.28.54%motif file (matrix) pdf
50Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer1e-4-1.032e+010.0002838.017.22%6717.715.12%motif file (matrix) pdf
51TATA-Box(TBP)/Promoter/Homer1e-4-1.024e+010.0002754.015.49%5996.413.50%motif file (matrix) pdf
52EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer1e-4-9.850e+000.0003112.02.30%692.11.56%motif file (matrix) pdf
53Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer1e-4-9.801e+000.0003153.03.14%1006.32.27%motif file (matrix) pdf
54Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer1e-4-9.576e+000.0003104.02.14%637.71.44%motif file (matrix) pdf
55Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer1e-4-9.507e+000.0004255.05.24%1825.84.11%motif file (matrix) pdf
56BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer1e-4-9.247e+000.0005749.015.39%6005.913.52%motif file (matrix) pdf
57Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer1e-3-8.929e+000.000699.02.03%611.21.38%motif file (matrix) pdf
58Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer1e-3-8.787e+000.0007721.014.81%5788.213.03%motif file (matrix) pdf
59Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer1e-3-8.685e+000.0008737.015.14%5932.213.36%motif file (matrix) pdf
60Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer1e-3-8.668e+000.0008105.02.16%661.41.49%motif file (matrix) pdf
61Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer1e-3-8.656e+000.0008702.014.42%5631.512.68%motif file (matrix) pdf
62Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer1e-3-8.489e+000.000929.00.60%125.00.28%motif file (matrix) pdf
63Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer1e-3-8.408e+000.0009113.02.32%727.71.64%motif file (matrix) pdf
64NRF(NRF)/Promoter/Homer1e-3-8.362e+000.001069.01.42%399.20.90%motif file (matrix) pdf
65Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer1e-3-8.235e+000.0011313.06.43%2344.85.28%motif file (matrix) pdf
66FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer1e-3-8.221e+000.0011241.04.95%1751.13.94%motif file (matrix) pdf
67Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer1e-3-8.124e+000.0012919.018.88%7550.917.00%motif file (matrix) pdf
68Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer1e-3-7.889e+000.0015256.05.26%1885.34.24%motif file (matrix) pdf
69Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer1e-3-7.881e+000.001532.00.66%149.50.34%motif file (matrix) pdf
70JunD(bZIP)/K562-JunD-ChIP-Seq/Homer1e-3-7.531e+000.002043.00.88%226.10.51%motif file (matrix) pdf
71REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer1e-3-7.493e+000.002110.00.21%25.20.06%motif file (matrix) pdf
72ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer1e-3-7.379e+000.0023241.04.95%1779.94.01%motif file (matrix) pdf
73ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer1e-3-7.364e+000.0023812.016.68%6663.915.00%motif file (matrix) pdf
74CRE(bZIP)/Promoter/Homer1e-3-7.076e+000.003092.01.89%593.61.34%motif file (matrix) pdf
75AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer1e-3-6.945e+000.0034341.07.01%2630.65.92%motif file (matrix) pdf
76Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer1e-2-6.769e+000.0040538.011.05%4320.29.73%motif file (matrix) pdf
77Brachyury(T-box)/Mesoendoderm-Brachyury-ChIP-exo(GSE54963)/Homer1e-2-6.648e+000.0044137.02.81%956.22.15%motif file (matrix) pdf
78Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer1e-2-6.634e+000.0044426.08.75%3366.07.58%motif file (matrix) pdf
79ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer1e-2-6.559e+000.0047660.013.56%5389.512.13%motif file (matrix) pdf
80TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer1e-2-6.343e+000.005853.01.09%313.30.71%motif file (matrix) pdf
81Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer1e-2-6.241e+000.0064131.02.69%919.72.07%motif file (matrix) pdf
82Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer1e-2-5.845e+000.0093241.04.95%1836.34.13%motif file (matrix) pdf
83NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer1e-2-5.823e+000.0094802.016.48%6681.115.04%motif file (matrix) pdf
84GFY(?)/Promoter/Homer1e-2-5.740e+000.010146.00.95%271.70.61%motif file (matrix) pdf
85Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer1e-2-5.620e+000.0113238.04.89%1820.94.10%motif file (matrix) pdf
86YY1(Zf)/Promoter/Homer1e-2-5.596e+000.011442.00.86%244.60.55%motif file (matrix) pdf
87AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer1e-2-5.501e+000.0124713.014.65%5923.413.34%motif file (matrix) pdf
88CTCF-SatelliteElement(Zf?)/CD4+-CTCF-ChIP-Seq(Barski et al.)/Homer1e-2-5.383e+000.013811.00.23%39.40.09%motif file (matrix) pdf
89RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer1e-2-5.361e+000.0139304.06.25%2389.95.38%motif file (matrix) pdf
90E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer1e-2-5.337e+000.0141204.04.19%1547.63.48%motif file (matrix) pdf
91NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer1e-2-5.168e+000.016527.00.55%143.10.32%motif file (matrix) pdf
92E2F(E2F)/Hela-CellCycle-Expression/Homer1e-2-5.116e+000.017224.00.49%123.70.28%motif file (matrix) pdf
93PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer1e-2-5.030e+000.018643.00.88%260.20.59%motif file (matrix) pdf
94PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer1e-2-5.026e+000.0186203.04.17%1551.73.49%motif file (matrix) pdf
95RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer1e-2-4.866e+000.0214509.010.46%4184.89.42%motif file (matrix) pdf
96Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan et al.)/Homer1e-2-4.818e+000.02221000.020.55%8514.819.17%motif file (matrix) pdf
97Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer1e-2-4.754e+000.0235695.014.28%5821.413.11%motif file (matrix) pdf
98Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer1e-2-4.741e+000.0235332.06.82%2660.75.99%motif file (matrix) pdf
99MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer1e-2-4.687e+000.0246110.02.26%794.61.79%motif file (matrix) pdf
100USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer1e-2-4.674e+000.0246181.03.72%1381.13.11%motif file (matrix) pdf
101CHR(?)/Hela-CellCycle-Expression/Homer1e-2-4.671e+000.0246392.08.05%3181.97.16%motif file (matrix) pdf
102E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer1e-2-4.645e+000.0249115.02.36%836.01.88%motif file (matrix) pdf