Homer Known Motif Enrichment Results (./)

Homer de novo Motif Results
Gene Ontology Enrichment Results
Known Motif Enrichment Results (txt file)
Total Target Sequences = 58366, Total Background Sequences = 57316
RankMotifNameP-valuelog P-pvalueq-value (Benjamini)# Target Sequences with Motif% of Targets Sequences with Motif# Background Sequences with Motif% of Background Sequences with MotifMotif File PDF
1OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer1e-1578-3.635e+030.00009035.015.48%3267.05.70%motif file (matrix) pdf
2CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski et al.)/Homer1e-1506-3.469e+030.00006828.011.70%2090.83.65%motif file (matrix) pdf
3BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer1e-1182-2.723e+030.000010501.018.00%4806.08.38%motif file (matrix) pdf
4Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer1e-811-1.868e+030.00006743.011.56%2936.65.12%motif file (matrix) pdf
5Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer1e-728-1.677e+030.00008347.014.30%4198.87.32%motif file (matrix) pdf
6REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer1e-635-1.464e+030.00001413.02.42%214.50.37%motif file (matrix) pdf
7Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer1e-516-1.190e+030.000011767.020.17%7417.112.94%motif file (matrix) pdf
8Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer1e-474-1.092e+030.000012022.020.60%7781.813.57%motif file (matrix) pdf
9Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer1e-411-9.471e+020.000018442.031.60%13589.223.70%motif file (matrix) pdf
10Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer1e-410-9.462e+020.000013082.022.42%8923.015.56%motif file (matrix) pdf
11Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer1e-401-9.246e+020.00005005.08.58%2560.84.47%motif file (matrix) pdf
12BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer1e-388-8.947e+020.000012853.022.03%8826.515.40%motif file (matrix) pdf
13Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer1e-380-8.766e+020.000015697.026.90%11317.319.74%motif file (matrix) pdf
14AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer1e-359-8.273e+020.000014026.024.04%9968.517.39%motif file (matrix) pdf
15TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer1e-313-7.209e+020.000018234.031.25%13949.424.33%motif file (matrix) pdf
16TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer1e-251-5.799e+020.000014891.025.52%11318.219.74%motif file (matrix) pdf
17TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer1e-251-5.781e+020.000012269.021.03%9007.915.71%motif file (matrix) pdf
18Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer1e-211-4.880e+020.000016681.028.59%13201.323.03%motif file (matrix) pdf
19Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer1e-204-4.705e+020.000028723.049.22%24616.342.94%motif file (matrix) pdf
20NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer1e-184-4.256e+020.00001611.02.76%701.31.22%motif file (matrix) pdf
21Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer1e-165-3.805e+020.00007480.012.82%5358.79.35%motif file (matrix) pdf
22RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer1e-164-3.788e+020.00002381.04.08%1272.62.22%motif file (matrix) pdf
23Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer1e-162-3.750e+020.00002561.04.39%1407.82.46%motif file (matrix) pdf
24Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer1e-154-3.553e+020.00001438.02.46%645.81.13%motif file (matrix) pdf
25Sp1(Zf)/Promoter/Homer1e-153-3.538e+020.000011210.019.21%8687.715.15%motif file (matrix) pdf
26Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer1e-137-3.164e+020.00001294.02.22%583.31.02%motif file (matrix) pdf
27Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer1e-134-3.089e+020.000026719.045.79%23356.840.74%motif file (matrix) pdf
28E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer1e-134-3.086e+020.000012391.021.23%9898.817.27%motif file (matrix) pdf
29Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer1e-125-2.883e+020.00006377.010.93%4646.98.11%motif file (matrix) pdf
30NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer1e-120-2.777e+020.00004531.07.76%3116.25.44%motif file (matrix) pdf
31Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer1e-118-2.734e+020.000026303.045.08%23125.540.34%motif file (matrix) pdf
32X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer1e-114-2.638e+020.00002580.04.42%1574.02.75%motif file (matrix) pdf
33Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer1e-112-2.596e+020.000012577.021.55%10249.817.88%motif file (matrix) pdf
34Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer1e-111-2.569e+020.00005135.08.80%3669.66.40%motif file (matrix) pdf
35FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer1e-102-2.366e+020.00008635.014.80%6775.511.82%motif file (matrix) pdf
36Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer1e-88-2.036e+020.00004346.07.45%3135.65.47%motif file (matrix) pdf
37E2F(E2F)/Hela-CellCycle-Expression/Homer1e-88-2.029e+020.00001822.03.12%1085.71.89%motif file (matrix) pdf
38Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer1e-84-1.952e+020.000012337.021.14%10300.417.97%motif file (matrix) pdf
39E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer1e-84-1.938e+020.00008145.013.96%6490.211.32%motif file (matrix) pdf
40E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer1e-83-1.912e+020.00004241.07.27%3078.75.37%motif file (matrix) pdf
41Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer1e-66-1.523e+020.000013827.023.70%11898.120.75%motif file (matrix) pdf
42E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer1e-64-1.487e+020.000014472.024.80%12523.221.84%motif file (matrix) pdf
43NRF(NRF)/Promoter/Homer1e-62-1.437e+020.00004368.07.49%3324.75.80%motif file (matrix) pdf
44TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer1e-58-1.351e+020.00001651.02.83%1063.11.85%motif file (matrix) pdf
45MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer1e-55-1.271e+020.00004340.07.44%3354.55.85%motif file (matrix) pdf
46NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer1e-52-1.219e+020.00001507.02.58%973.81.70%motif file (matrix) pdf
47EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer1e-51-1.194e+020.00005650.09.68%4544.37.93%motif file (matrix) pdf
48Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer1e-50-1.164e+020.000016610.028.47%14744.825.72%motif file (matrix) pdf
49MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer1e-48-1.120e+020.000013266.022.73%11609.520.25%motif file (matrix) pdf
50ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer1e-46-1.077e+020.00001447.02.48%952.41.66%motif file (matrix) pdf
51ETS(ETS)/Promoter/Homer1e-44-1.029e+020.00007049.012.08%5885.810.27%motif file (matrix) pdf
52ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer1e-43-1.001e+020.000011195.019.19%9740.116.99%motif file (matrix) pdf
53Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer1e-43-9.959e+010.00008248.014.13%7003.212.22%motif file (matrix) pdf
54NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer1e-28-6.562e+010.000010639.018.23%9456.416.49%motif file (matrix) pdf
55CRE(bZIP)/Promoter/Homer1e-27-6.330e+010.00003996.06.85%3303.45.76%motif file (matrix) pdf
56Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer1e-26-5.997e+010.00009653.016.54%8570.114.95%motif file (matrix) pdf
57Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer1e-22-5.192e+010.00009653.016.54%8635.515.06%motif file (matrix) pdf
58Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer1e-22-5.135e+010.00002630.04.51%2129.33.71%motif file (matrix) pdf
59E-box(bHLH)/Promoter/Homer1e-21-5.040e+010.00001691.02.90%1303.72.27%motif file (matrix) pdf
60Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer1e-21-4.938e+010.00005786.09.92%5027.48.77%motif file (matrix) pdf
61EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer1e-20-4.823e+010.000010571.018.12%9537.516.64%motif file (matrix) pdf
62Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer1e-19-4.593e+010.00003681.06.31%3107.25.42%motif file (matrix) pdf
63Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer1e-19-4.527e+010.00004272.07.32%3653.26.37%motif file (matrix) pdf
64Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer1e-19-4.470e+010.000015362.026.33%14153.224.69%motif file (matrix) pdf
65Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer1e-18-4.300e+010.000010720.018.37%9729.016.97%motif file (matrix) pdf
66NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber et al.)/Homer1e-16-3.731e+010.00003433.05.88%2930.75.11%motif file (matrix) pdf
67JunD(bZIP)/K562-JunD-ChIP-Seq/Homer1e-15-3.527e+010.00001403.02.40%1106.01.93%motif file (matrix) pdf
68GFY-Staf(?,Zf)/Promoter/Homer1e-14-3.298e+010.00001203.02.06%939.61.64%motif file (matrix) pdf
69GFY(?)/Promoter/Homer1e-12-2.950e+010.00001556.02.67%1266.62.21%motif file (matrix) pdf
70Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo et al.)/Homer1e-12-2.881e+010.000011683.020.02%10805.918.85%motif file (matrix) pdf
71EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer1e-12-2.878e+010.000021636.037.08%20437.035.65%motif file (matrix) pdf
72Tcfcp2l1(CP2)/mES-Tcfcp2l1-ChIP-Seq(GSE11431)/Homer1e-11-2.730e+010.00002471.04.23%2108.83.68%motif file (matrix) pdf
73Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer1e-11-2.665e+010.000020104.034.45%18980.033.11%motif file (matrix) pdf
74YY1(Zf)/Promoter/Homer1e-11-2.573e+010.00001647.02.82%1366.72.38%motif file (matrix) pdf
75PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer1e-11-2.544e+010.00005292.09.07%4753.78.29%motif file (matrix) pdf
76GFX(?)/Promoter/Homer1e-10-2.493e+010.0000343.00.59%230.90.40%motif file (matrix) pdf
77GATA:SCL(Zf,bHLH)/Ter119-SCL-ChIP-Seq(GSE18720)/Homer1e-9-2.294e+010.00001950.03.34%1657.32.89%motif file (matrix) pdf
78Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer1e-8-1.927e+010.00003002.05.14%2657.54.64%motif file (matrix) pdf
79GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer1e-7-1.798e+010.000016140.027.66%15274.926.64%motif file (matrix) pdf
80Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer1e-7-1.710e+010.00002996.05.13%2670.94.66%motif file (matrix) pdf
81HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer1e-7-1.688e+010.00006510.011.16%6004.010.47%motif file (matrix) pdf
82CTCF-SatelliteElement(Zf?)/CD4+-CTCF-ChIP-Seq(Barski et al.)/Homer1e-6-1.569e+010.0000293.00.50%210.90.37%motif file (matrix) pdf
83MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer1e-6-1.557e+010.000014484.024.82%13712.323.92%motif file (matrix) pdf
84c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer1e-6-1.455e+010.00008481.014.53%7928.713.83%motif file (matrix) pdf
85NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer1e-6-1.396e+010.00003181.05.45%2874.25.01%motif file (matrix) pdf
86Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer1e-6-1.384e+010.000017802.030.51%16973.029.61%motif file (matrix) pdf
87Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer1e-5-1.360e+010.000026293.045.06%25277.244.09%motif file (matrix) pdf
88AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer1e-5-1.270e+010.000019514.033.44%18668.132.56%motif file (matrix) pdf
89Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer1e-5-1.153e+010.00004828.08.27%4469.17.80%motif file (matrix) pdf
90ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer1e-4-1.071e+010.00011670.02.86%1484.52.59%motif file (matrix) pdf
91STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer1e-3-8.077e+000.00095724.09.81%5385.09.39%motif file (matrix) pdf
92STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer1e-2-6.593e+000.00398912.015.27%8502.714.83%motif file (matrix) pdf
93IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer1e-2-5.664e+000.00981920.03.29%1774.23.09%motif file (matrix) pdf