Homer de novo Motif Results (.//)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 58345
Total background sequences = 57374
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 1e-1389-3.201e+0315.37%6.06%697.4bp (230.2bp)MA0142.1_Pou5f1::Sox2/Jaspar(0.928)
More Information | Similar Motifs Found		motif file (matrix)
2 1e-1084-2.498e+0315.32%6.84%670.1bp (216.8bp)BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer(0.936)
More Information | Similar Motifs Found		motif file (matrix)
3 1e-827-1.906e+0310.51%4.39%642.2bp (213.7bp)Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer(0.994)
More Information | Similar Motifs Found		motif file (matrix)
4 1e-536-1.236e+0318.73%11.65%740.9bp (228.2bp)MA0143.3_Sox2/Jaspar(0.909)
More Information | Similar Motifs Found		motif file (matrix)
5 1e-365-8.409e+021.48%0.25%404.8bp (217.8bp)MA0138.2_REST/Jaspar(0.827)
More Information | Similar Motifs Found		motif file (matrix)
6 1e-359-8.289e+0220.09%13.95%786.9bp (226.9bp)TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer(0.933)
More Information | Similar Motifs Found		motif file (matrix)
7 1e-344-7.923e+0221.30%15.12%702.9bp (214.9bp)Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer(0.948)
More Information | Similar Motifs Found		motif file (matrix)
8 1e-236-5.453e+0219.44%14.44%1074.1bp (229.9bp)PB0097.1_Zfp281_1/Jaspar(0.890)
More Information | Similar Motifs Found		motif file (matrix)
9 1e-226-5.222e+0218.15%13.41%804.1bp (230.9bp)CHR(?)/Hela-CellCycle-Expression/Homer(0.678)
More Information | Similar Motifs Found		motif file (matrix)
10 1e-220-5.087e+0213.62%9.53%928.3bp (235.0bp)MA0467.1_Crx/Jaspar(0.581)
More Information | Similar Motifs Found		motif file (matrix)
11 1e-209-4.824e+029.26%5.99%927.6bp (239.7bp)E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer(0.626)
More Information | Similar Motifs Found		motif file (matrix)
12 1e-206-4.745e+0212.71%8.88%890.9bp (240.8bp)MA0076.2_ELK4/Jaspar(0.666)
More Information | Similar Motifs Found		motif file (matrix)
13 1e-176-4.054e+0214.32%10.55%893.7bp (241.6bp)PB0112.1_E2F2_2/Jaspar(0.611)
More Information | Similar Motifs Found		motif file (matrix)
14 1e-175-4.051e+0214.82%10.99%859.5bp (234.3bp)Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan et al.)/Homer(0.831)
More Information | Similar Motifs Found		motif file (matrix)
15 1e-167-3.859e+027.04%4.48%1004.1bp (240.6bp)PH0126.1_Obox6/Jaspar(0.638)
More Information | Similar Motifs Found		motif file (matrix)
16 1e-155-3.590e+0219.82%15.68%896.8bp (238.2bp)MA0103.2_ZEB1/Jaspar(0.646)
More Information | Similar Motifs Found		motif file (matrix)
17 1e-150-3.461e+0214.44%10.92%900.8bp (243.4bp)PB0143.1_Klf7_2/Jaspar(0.751)
More Information | Similar Motifs Found		motif file (matrix)
18 1e-149-3.451e+0219.25%15.23%995.5bp (231.0bp)MA0038.1_Gfi1/Jaspar(0.642)
More Information | Similar Motifs Found		motif file (matrix)
19 1e-141-3.259e+0215.93%12.34%809.5bp (222.0bp)Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer(0.714)
More Information | Similar Motifs Found		motif file (matrix)
20 1e-121-2.801e+0214.28%11.11%923.7bp (233.0bp)Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer(0.734)
More Information | Similar Motifs Found		motif file (matrix)
21 1e-119-2.742e+0213.94%10.84%855.8bp (231.2bp)IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer(0.693)
More Information | Similar Motifs Found		motif file (matrix)
22 1e-108-2.504e+024.50%2.85%662.0bp (216.2bp)Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer(0.938)
More Information | Similar Motifs Found		motif file (matrix)
23 1e-95-2.208e+020.15%0.01%452.2bp (231.9bp)Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer(0.801)
More Information | Similar Motifs Found		motif file (matrix)
24 1e-95-2.206e+029.91%7.54%1008.9bp (239.3bp)PB0192.1_Tcfap2e_2/Jaspar(0.715)
More Information | Similar Motifs Found		motif file (matrix)
25 1e-68-1.581e+020.19%0.02%566.4bp (279.5bp)MA0101.1_REL/Jaspar(0.653)
More Information | Similar Motifs Found		motif file (matrix)
26 1e-68-1.576e+020.44%0.11%666.0bp (234.8bp)PH0041.1_Hmx1/Jaspar(0.656)
More Information | Similar Motifs Found		motif file (matrix)
27 1e-64-1.486e+020.09%0.00%408.4bp (0.0bp)PH0065.1_Hoxc10/Jaspar(0.642)
More Information | Similar Motifs Found		motif file (matrix)
28 1e-57-1.313e+020.09%0.00%405.5bp (177.9bp)MA0047.2_Foxa2/Jaspar(0.700)
More Information | Similar Motifs Found		motif file (matrix)