| Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
| 1 |
| Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-50 | -1.167e+02 | 0.0000 | 194.0 | 26.72% | 3880.3 | 7.97% | motif file (matrix) |
svg |
| 2 |
| Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer | 1e-48 | -1.115e+02 | 0.0000 | 277.0 | 38.15% | 7588.9 | 15.58% | motif file (matrix) |
svg |
| 3 |
| Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer | 1e-47 | -1.082e+02 | 0.0000 | 224.0 | 30.85% | 5331.7 | 10.95% | motif file (matrix) |
svg |
| 4 |
| Fos(bZIP)/TSC-Fos-ChIP-Seq(GSE110950)/Homer | 1e-43 | -1.013e+02 | 0.0000 | 305.0 | 42.01% | 9396.8 | 19.29% | motif file (matrix) |
svg |
| 5 |
| Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer | 1e-41 | -9.664e+01 | 0.0000 | 294.0 | 40.50% | 9052.6 | 18.59% | motif file (matrix) |
svg |
| 6 |
| JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer | 1e-37 | -8.561e+01 | 0.0000 | 285.0 | 39.26% | 9121.1 | 18.73% | motif file (matrix) |
svg |
| 7 |
| Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer | 1e-35 | -8.221e+01 | 0.0000 | 313.0 | 43.11% | 10773.3 | 22.12% | motif file (matrix) |
svg |
| 8 |
| BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer | 1e-33 | -7.783e+01 | 0.0000 | 311.0 | 42.84% | 10909.3 | 22.40% | motif file (matrix) |
svg |
| 9 |
| AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-31 | -7.184e+01 | 0.0000 | 326.0 | 44.90% | 12096.7 | 24.84% | motif file (matrix) |
svg |
| 10 |
| Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer | 1e-18 | -4.238e+01 | 0.0000 | 120.0 | 16.53% | 3319.9 | 6.82% | motif file (matrix) |
svg |
| 11 |
| Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer | 1e-18 | -4.164e+01 | 0.0000 | 74.0 | 10.19% | 1498.2 | 3.08% | motif file (matrix) |
svg |
| 12 |
| NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer | 1e-16 | -3.904e+01 | 0.0000 | 496.0 | 68.32% | 25695.4 | 52.76% | motif file (matrix) |
svg |
| 13 |
| RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer | 1e-16 | -3.827e+01 | 0.0000 | 66.0 | 9.09% | 1306.8 | 2.68% | motif file (matrix) |
svg |
| 14 |
| Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer | 1e-16 | -3.708e+01 | 0.0000 | 298.0 | 41.05% | 13062.0 | 26.82% | motif file (matrix) |
svg |
| 15 |
| X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer | 1e-12 | -2.890e+01 | 0.0000 | 73.0 | 10.06% | 1884.0 | 3.87% | motif file (matrix) |
svg |
| 16 |
| Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer | 1e-12 | -2.850e+01 | 0.0000 | 183.0 | 25.21% | 7279.3 | 14.95% | motif file (matrix) |
svg |
| 17 |
| Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer | 1e-11 | -2.722e+01 | 0.0000 | 97.0 | 13.36% | 3014.8 | 6.19% | motif file (matrix) |
svg |
| 18 |
| Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer | 1e-10 | -2.462e+01 | 0.0000 | 167.0 | 23.00% | 6738.9 | 13.84% | motif file (matrix) |
svg |
| 19 |
| Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer | 1e-10 | -2.438e+01 | 0.0000 | 105.0 | 14.46% | 3557.6 | 7.30% | motif file (matrix) |
svg |
| 20 |
| Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer | 1e-9 | -2.141e+01 | 0.0000 | 222.0 | 30.58% | 10161.6 | 20.86% | motif file (matrix) |
svg |
| 21 |
| Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer | 1e-8 | -2.062e+01 | 0.0000 | 41.0 | 5.65% | 917.7 | 1.88% | motif file (matrix) |
svg |
| 22 |
| NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer | 1e-8 | -2.044e+01 | 0.0000 | 43.0 | 5.92% | 1000.0 | 2.05% | motif file (matrix) |
svg |
| 23 |
| Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer | 1e-8 | -2.039e+01 | 0.0000 | 70.0 | 9.64% | 2142.1 | 4.40% | motif file (matrix) |
svg |
| 24 |
| WT1(Zf)/Kidney-WT1-ChIP-Seq(GSE90016)/Homer | 1e-8 | -1.941e+01 | 0.0000 | 212.0 | 29.20% | 9803.7 | 20.13% | motif file (matrix) |
svg |
| 25 |
| NFIL3(bZIP)/HepG2-NFIL3-ChIP-Seq(Encode)/Homer | 1e-7 | -1.745e+01 | 0.0000 | 196.0 | 27.00% | 9099.9 | 18.68% | motif file (matrix) |
svg |
| 26 |
| Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer | 1e-6 | -1.536e+01 | 0.0000 | 344.0 | 47.38% | 18554.3 | 38.09% | motif file (matrix) |
svg |
| 27 |
| Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer | 1e-6 | -1.516e+01 | 0.0000 | 116.0 | 15.98% | 4835.5 | 9.93% | motif file (matrix) |
svg |
| 28 |
| Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer | 1e-6 | -1.492e+01 | 0.0000 | 150.0 | 20.66% | 6747.3 | 13.85% | motif file (matrix) |
svg |
| 29 |
| NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer | 1e-5 | -1.291e+01 | 0.0000 | 139.0 | 19.15% | 6358.9 | 13.06% | motif file (matrix) |
svg |
| 30 |
| Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer | 1e-5 | -1.252e+01 | 0.0001 | 287.0 | 39.53% | 15383.6 | 31.58% | motif file (matrix) |
svg |
| 31 |
| Dlx3(Homeobox)/Kerainocytes-Dlx3-ChIP-Seq(GSE89884)/Homer | 1e-5 | -1.203e+01 | 0.0001 | 204.0 | 28.10% | 10311.3 | 21.17% | motif file (matrix) |
svg |
| 32 |
| TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer | 1e-5 | -1.198e+01 | 0.0001 | 215.0 | 29.61% | 10988.5 | 22.56% | motif file (matrix) |
svg |
| 33 |
| Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer | 1e-5 | -1.183e+01 | 0.0001 | 31.0 | 4.27% | 848.8 | 1.74% | motif file (matrix) |
svg |
| 34 |
| MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer | 1e-5 | -1.164e+01 | 0.0001 | 245.0 | 33.75% | 12896.9 | 26.48% | motif file (matrix) |
svg |
| 35 |
| Brachyury(T-box)/Mesoendoderm-Brachyury-ChIP-exo(GSE54963)/Homer | 1e-5 | -1.161e+01 | 0.0001 | 116.0 | 15.98% | 5211.6 | 10.70% | motif file (matrix) |
svg |
| 36 |
| Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer | 1e-4 | -1.121e+01 | 0.0002 | 158.0 | 21.76% | 7682.1 | 15.77% | motif file (matrix) |
svg |
| 37 |
| DLX5(Homeobox)/BasalGanglia-Dlx5-ChIP-seq(GSE124936)/Homer | 1e-4 | -1.112e+01 | 0.0002 | 233.0 | 32.09% | 12239.5 | 25.13% | motif file (matrix) |
svg |
| 38 |
| HIC1(Zf)/Treg-ZBTB29-ChIP-Seq(GSE99889)/Homer | 1e-4 | -1.078e+01 | 0.0002 | 482.0 | 66.39% | 28696.7 | 58.92% | motif file (matrix) |
svg |
| 39 |
| NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer | 1e-4 | -1.059e+01 | 0.0003 | 71.0 | 9.78% | 2864.4 | 5.88% | motif file (matrix) |
svg |
| 40 |
| Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer | 1e-4 | -1.030e+01 | 0.0004 | 420.0 | 57.85% | 24548.3 | 50.40% | motif file (matrix) |
svg |
| 41 |
| DLX1(Homeobox)/BasalGanglia-Dlx1-ChIP-seq(GSE124936)/Homer | 1e-4 | -9.532e+00 | 0.0008 | 351.0 | 48.35% | 20112.3 | 41.29% | motif file (matrix) |
svg |
| 42 |
| Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer | 1e-4 | -9.276e+00 | 0.0010 | 348.0 | 47.93% | 19971.9 | 41.00% | motif file (matrix) |
svg |
| 43 |
| DLX2(Homeobox)/BasalGanglia-Dlx2-ChIP-seq(GSE124936)/Homer | 1e-3 | -9.133e+00 | 0.0011 | 384.0 | 52.89% | 22389.5 | 45.97% | motif file (matrix) |
svg |
| 44 |
| NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer | 1e-3 | -8.852e+00 | 0.0014 | 433.0 | 59.64% | 25755.1 | 52.88% | motif file (matrix) |
svg |
| 45 |
| Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer | 1e-3 | -8.812e+00 | 0.0015 | 149.0 | 20.52% | 7513.5 | 15.43% | motif file (matrix) |
svg |
| 46 |
| NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer | 1e-3 | -8.587e+00 | 0.0018 | 274.0 | 37.74% | 15318.6 | 31.45% | motif file (matrix) |
svg |
| 47 |
| Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer | 1e-3 | -8.389e+00 | 0.0021 | 255.0 | 35.12% | 14148.1 | 29.05% | motif file (matrix) |
svg |
| 48 |
| PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer | 1e-3 | -8.257e+00 | 0.0024 | 98.0 | 13.50% | 4610.7 | 9.47% | motif file (matrix) |
svg |
| 49 |
| En1(Homeobox)/SUM149-EN1-ChIP-Seq(GSE120957)/Homer | 1e-3 | -8.183e+00 | 0.0025 | 436.0 | 60.06% | 26119.8 | 53.63% | motif file (matrix) |
svg |
| 50 |
| MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer | 1e-3 | -7.619e+00 | 0.0043 | 94.0 | 12.95% | 4468.4 | 9.17% | motif file (matrix) |
svg |
| 51 |
| TEAD3(TEA)/HepG2-TEAD3-ChIP-Seq(Encode)/Homer | 1e-3 | -7.552e+00 | 0.0045 | 322.0 | 44.35% | 18667.6 | 38.33% | motif file (matrix) |
svg |
| 52 |
| HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer | 1e-3 | -7.539e+00 | 0.0045 | 220.0 | 30.30% | 12117.0 | 24.88% | motif file (matrix) |
svg |
| 53 |
| STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer | 1e-3 | -7.328e+00 | 0.0055 | 178.0 | 24.52% | 9543.7 | 19.59% | motif file (matrix) |
svg |
| 54 |
| Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer | 1e-3 | -7.252e+00 | 0.0058 | 366.0 | 50.41% | 21646.8 | 44.44% | motif file (matrix) |
svg |
| 55 |
| TEAD1(TEAD)/HepG2-TEAD1-ChIP-Seq(Encode)/Homer | 1e-3 | -7.161e+00 | 0.0062 | 277.0 | 38.15% | 15838.2 | 32.52% | motif file (matrix) |
svg |
| 56 |
| Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer | 1e-3 | -6.916e+00 | 0.0078 | 280.0 | 38.57% | 16092.8 | 33.04% | motif file (matrix) |
svg |
| 57 |
| Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer | 1e-2 | -6.678e+00 | 0.0097 | 215.0 | 29.61% | 11994.2 | 24.63% | motif file (matrix) |
svg |
| 58 |
| Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer | 1e-2 | -6.658e+00 | 0.0097 | 493.0 | 67.91% | 30427.9 | 62.47% | motif file (matrix) |
svg |
| 59 |
| HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer | 1e-2 | -6.502e+00 | 0.0112 | 91.0 | 12.53% | 4457.8 | 9.15% | motif file (matrix) |
svg |
| 60 |
| Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer | 1e-2 | -6.351e+00 | 0.0128 | 392.0 | 53.99% | 23626.9 | 48.51% | motif file (matrix) |
svg |
| 61 |
| Oct11(POU,Homeobox)/NCIH1048-POU2F3-ChIP-seq(GSE115123)/Homer | 1e-2 | -6.261e+00 | 0.0138 | 106.0 | 14.60% | 5378.3 | 11.04% | motif file (matrix) |
svg |
| 62 |
| MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer | 1e-2 | -6.183e+00 | 0.0146 | 294.0 | 40.50% | 17191.3 | 35.30% | motif file (matrix) |
svg |
| 63 |
| TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer | 1e-2 | -6.011e+00 | 0.0171 | 246.0 | 33.88% | 14132.6 | 29.02% | motif file (matrix) |
svg |
| 64 |
| Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer | 1e-2 | -5.921e+00 | 0.0184 | 289.0 | 39.81% | 16937.2 | 34.77% | motif file (matrix) |
svg |
| 65 |
| HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer | 1e-2 | -5.792e+00 | 0.0207 | 63.0 | 8.68% | 2950.1 | 6.06% | motif file (matrix) |
svg |
| 66 |
| BHLHA15(bHLH)/NIH3T3-BHLHB8.HA-ChIP-Seq(GSE119782)/Homer | 1e-2 | -5.769e+00 | 0.0208 | 397.0 | 54.68% | 24130.2 | 49.54% | motif file (matrix) |
svg |
| 67 |
| GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer | 1e-2 | -5.749e+00 | 0.0209 | 94.0 | 12.95% | 4754.0 | 9.76% | motif file (matrix) |
svg |
| 68 |
| Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer | 1e-2 | -5.681e+00 | 0.0221 | 79.0 | 10.88% | 3885.8 | 7.98% | motif file (matrix) |
svg |
| 69 |
| Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer | 1e-2 | -5.468e+00 | 0.0269 | 252.0 | 34.71% | 14664.2 | 30.11% | motif file (matrix) |
svg |
| 70 |
| GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer | 1e-2 | -5.399e+00 | 0.0284 | 60.0 | 8.26% | 2833.9 | 5.82% | motif file (matrix) |
svg |
| 71 |
| NFE2L2(bZIP)/HepG2-NFE2L2-ChIP-Seq(Encode)/Homer | 1e-2 | -5.293e+00 | 0.0311 | 29.0 | 3.99% | 1150.8 | 2.36% | motif file (matrix) |
svg |
| 72 |
| STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer | 1e-2 | -5.197e+00 | 0.0338 | 268.0 | 36.91% | 15777.3 | 32.39% | motif file (matrix) |
svg |
| 73 |
| CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer | 1e-2 | -5.102e+00 | 0.0367 | 98.0 | 13.50% | 5108.1 | 10.49% | motif file (matrix) |
svg |
| 74 |
| PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer | 1e-2 | -5.090e+00 | 0.0367 | 539.0 | 74.24% | 34078.8 | 69.97% | motif file (matrix) |
svg |
| 75 |
| RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer | 1e-2 | -4.907e+00 | 0.0434 | 232.0 | 31.96% | 13534.3 | 27.79% | motif file (matrix) |
svg |
| 76 |
| Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer | 1e-2 | -4.848e+00 | 0.0454 | 484.0 | 66.67% | 30335.6 | 62.28% | motif file (matrix) |
svg |
| 77 |
| Six4(Homeobox)/MCF7-SIX4-ChIP-Seq(Encode)/Homer | 1e-2 | -4.763e+00 | 0.0488 | 22.0 | 3.03% | 836.8 | 1.72% | motif file (matrix) |
svg |
| 78 |
| Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer | 1e-2 | -4.712e+00 | 0.0507 | 343.0 | 47.25% | 20855.9 | 42.82% | motif file (matrix) |
svg |