Homer de novo Motif Results (reverse/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
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More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 726
Total background sequences = 48679
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 C G A T T C G A A C G T A C T G C G T A A T C G A C G T A G T C C G T A A G C T 1e-57-1.320e+0229.75%8.87%274.2bp (250.3bp)Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer(0.987)
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motif file (matrix)
2 G C A T G T C A G T C A C G A T A C G T C G T A T C A G G T A C G T C A A G T C 1e-26-6.056e+0134.02%17.45%281.7bp (256.7bp)Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer(0.768)
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motif file (matrix)
3 G C A T G A C T C A G T T A C G T G A C G T C A T G C A C T G A A C T G G T A C 1e-23-5.525e+0138.43%21.65%297.3bp (259.6bp)POL010.1_DCE_S_III/Jaspar(0.659)
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motif file (matrix)
4 A C G T A G C T A T C G A G T C C G A T A T C G A T G C A G T C C G T A T C A G 1e-23-5.427e+0162.53%43.79%263.4bp (256.9bp)NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer(0.960)
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motif file (matrix)
5 G T A C A G C T T G C A G C A T C G A T G A C T G C A T C G A T T C G A T C A G 1e-19-4.494e+0135.67%20.87%272.8bp (249.7bp)MEF2A/MA0052.4/Jaspar(0.962)
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motif file (matrix)
6 A C T G A G T C C G T A A T C G G T C A C A G T A C G T A C T G 1e-19-4.410e+0140.22%24.86%303.7bp (259.1bp)NEUROD1/MA1109.1/Jaspar(0.765)
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motif file (matrix)
7 C G T A T C G A G A C T A G C T C T G A C G A T A T C G A G T C 1e-18-4.148e+0128.93%15.92%300.9bp (255.8bp)PB0176.1_Sox5_2/Jaspar(0.758)
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motif file (matrix)
8 G T A C A G T C C G A T G T A C A G T C A T C G C G T A A G T C 1e-17-4.100e+0131.13%17.75%275.3bp (241.9bp)Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer(0.797)
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motif file (matrix)
9 A T G C A G T C T C G A G A C T C T A G A T C G T G C A T C G A C T G A A G T C 1e-16-3.906e+0121.76%10.79%242.2bp (250.4bp)RFX3/MA0798.2/Jaspar(0.854)
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motif file (matrix)
10 G C A T T A C G C A G T C T A G A T C G C T A G G T A C C A G T A C T G G T C A 1e-16-3.720e+0116.80%7.49%271.0bp (252.2bp)Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer(0.711)
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motif file (matrix)
11 T A C G G T A C C T G A T G A C C G T A T C A G T C G A C A T G A G T C C T A G 1e-15-3.519e+0155.37%40.52%279.6bp (259.4bp)ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer(0.712)
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motif file (matrix)
12 A C T G A T C G G C T A C T G A A T G C C G T A G C T A G C A T 1e-14-3.331e+0143.25%29.54%310.9bp (251.6bp)PB0173.1_Sox21_2/Jaspar(0.865)
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motif file (matrix)
13 A T C G T G A C C G T A G A C T A C G T T A C G C T G A C G T A T G C A A C G T C A G T G T A C 1e-14-3.302e+018.82%2.84%286.9bp (254.5bp)LIN54/MA0619.1/Jaspar(0.668)
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motif file (matrix)
14 T C A G G T A C T C G A A C G T A C T G T A C G C G T A G A C T A C G T C A G T 1e-14-3.250e+0114.05%6.11%335.2bp (257.5bp)Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer(0.708)
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motif file (matrix)
15 A T C G C T G A C T G A C G T A T A C G T G A C C T G A A T C G A C G T A G T C 1e-14-3.227e+0122.59%12.30%283.6bp (255.2bp)IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer(0.676)
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motif file (matrix)
16 A C T G T C G A G T C A G C T A G A C T T A C G C A G T A C T G A G C T C G A T 1e-13-3.147e+0110.19%3.75%317.9bp (254.6bp)TEAD2/MA1121.1/Jaspar(0.693)
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motif file (matrix)
17 G C T A T C A G A T G C G T A C G T C A A C T G A G T C G A T C C A T G T A C G 1e-13-3.011e+0117.36%8.68%284.2bp (260.7bp)Zic1::Zic2/MA1628.1/Jaspar(0.694)
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motif file (matrix)
18 C A G T C A T G A G T C C G T A A T C G G T C A C G T A G C T A G C T A C G T A T C A G C G T A 1e-12-2.869e+015.79%1.50%243.9bp (249.7bp)PB0145.1_Mafb_2/Jaspar(0.654)
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motif file (matrix)
19 G A C T T A C G G A T C C A G T C A G T A T G C G A C T T C G A C T G A C T G A 1e-12-2.846e+0125.21%14.95%303.5bp (257.5bp)POL008.1_DCE_S_I/Jaspar(0.661)
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motif file (matrix)
20 * A C G T C T G A C A G T A G C T G T A C T C G A A C T G T A G C 1e-11-2.751e+0136.50%24.71%290.3bp (256.7bp)MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer(0.727)
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motif file (matrix)
21 * T C A G A G T C C G T A A T C G C G T A A C T G A T G C A G T C A C G T A T C G C G A T A C T G 1e-11-2.573e+018.95%3.45%245.5bp (252.3bp)ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer(0.662)
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motif file (matrix)
22 * G T C A C G T A A G T C C T G A A T C G T G A C T G A C A C T G 1e-10-2.350e+0131.13%20.88%261.1bp (264.0bp)ZNF341/MA1655.1/Jaspar(0.902)
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motif file (matrix)
23 * A C G T A C G T C T G A A G T C T G C A A C G T C G T A C G T A 1e-9-2.246e+0112.12%5.87%234.9bp (244.5bp)HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer(0.930)
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motif file (matrix)
24 * C G T A A C T G A G T C A C G T A C T G A G T C A G T C A C G T A C G T A C G T A G T C A C G T 1e-8-2.014e+0123.97%15.49%313.6bp (257.6bp)PRDM1/MA0508.3/Jaspar(0.614)
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motif file (matrix)
25 * G A T C C G A T A C T G A C G T A C G T A G C T T G A C A C G T T C A G C A G T T C A G A G T C 1e-5-1.181e+0125.90%19.26%283.1bp (254.5bp)ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer(0.621)
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motif file (matrix)
26 * C G T A A C T G C G A T A C G T A G T C A G T C A G T C C G T A C T G A A C G T C G T A A C T G 1e-3-9.116e+000.28%0.00%226.8bp (148.3bp)RBPJ/MA1116.1/Jaspar(0.669)
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motif file (matrix)
27 * A G T C C G T A A C T G A G T C A C G T A C T G A G T C A C T G A C T G A C T G A C T G A C G T 1e-3-7.740e+000.28%0.00%40.6bp (205.7bp)NHLH1/MA0048.2/Jaspar(0.764)
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motif file (matrix)
28 * A C G T A C T G A G T C C G T A A C G T A C T G A C G T A C T G A C T G A C T G C G T A A G T C 1e-3-6.939e+000.28%0.01%187.1bp (4.2bp)MXI1/MA1108.2/Jaspar(0.695)
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motif file (matrix)
29 * A T G C C G T A A G C T G T C A A C T G A C T G C G T A C T G A C T G A A C G T 1e-2-6.082e+001.79%0.70%312.2bp (253.9bp)PB0115.1_Ehf_2/Jaspar(0.782)
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motif file (matrix)
30 * C G T A A G T C C G T A A G T C A C T G A C T G A G T C A G T C A G T C A G T C A C G T A G T C 1e-1-3.528e+000.14%0.01%51.6bp (56.3bp)PB0076.1_Sp4_1/Jaspar(0.680)
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motif file (matrix)
31 * A G T C C G T A A C T G A G T C A T C G C A T G A C G T A T C G C G T A T A C G C G T A A C T G 1e-1-3.377e+000.41%0.10%115.9bp (259.7bp)Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer(0.629)
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motif file (matrix)
32 * A C T G A C T G A C T G C G T A A C T G A C T G C G T A A G T C C G T A A C G T A G T C C G T A 1e-1-2.860e+0010.74%8.98%302.7bp (246.5bp)ZNF263/MA0528.2/Jaspar(0.732)
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motif file (matrix)
33 * C G T A A G T C A C G T A C T G C G T A A C T G A C G T A C T G A C G T A C G T 1e0-1.501e+000.41%0.22%160.1bp (237.5bp)Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer(0.698)
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motif file (matrix)