| Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
| 1 |
| CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-32 | -7.575e+01 | 0.0000 | 58.0 | 11.39% | 683.5 | 1.41% | motif file (matrix) |
svg |
| 2 |
| BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer | 1e-26 | -6.156e+01 | 0.0000 | 63.0 | 12.38% | 1085.7 | 2.24% | motif file (matrix) |
svg |
| 3 |
| Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer | 1e-13 | -2.994e+01 | 0.0000 | 61.0 | 11.98% | 1965.0 | 4.06% | motif file (matrix) |
svg |
| 4 |
| NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer | 1e-12 | -2.884e+01 | 0.0000 | 175.0 | 34.38% | 9939.1 | 20.54% | motif file (matrix) |
svg |
| 5 |
| JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer | 1e-12 | -2.807e+01 | 0.0000 | 59.0 | 11.59% | 1943.3 | 4.02% | motif file (matrix) |
svg |
| 6 |
| BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer | 1e-12 | -2.800e+01 | 0.0000 | 67.0 | 13.16% | 2402.4 | 4.97% | motif file (matrix) |
svg |
| 7 |
| Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer | 1e-11 | -2.580e+01 | 0.0000 | 53.0 | 10.41% | 1720.1 | 3.56% | motif file (matrix) |
svg |
| 8 |
| Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer | 1e-10 | -2.332e+01 | 0.0000 | 32.0 | 6.29% | 760.4 | 1.57% | motif file (matrix) |
svg |
| 9 |
| Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer | 1e-9 | -2.206e+01 | 0.0000 | 61.0 | 11.98% | 2387.9 | 4.94% | motif file (matrix) |
svg |
| 10 |
| Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer | 1e-9 | -2.205e+01 | 0.0000 | 41.0 | 8.06% | 1247.0 | 2.58% | motif file (matrix) |
svg |
| 11 |
| AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-9 | -2.188e+01 | 0.0000 | 67.0 | 13.16% | 2772.7 | 5.73% | motif file (matrix) |
svg |
| 12 |
| Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-8 | -1.913e+01 | 0.0000 | 32.0 | 6.29% | 905.1 | 1.87% | motif file (matrix) |
svg |
| 13 |
| NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer | 1e-8 | -1.871e+01 | 0.0000 | 50.0 | 9.82% | 1926.9 | 3.98% | motif file (matrix) |
svg |
| 14 |
| NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-6 | -1.455e+01 | 0.0000 | 13.0 | 2.55% | 207.8 | 0.43% | motif file (matrix) |
svg |
| 15 |
| Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer | 1e-6 | -1.448e+01 | 0.0000 | 21.0 | 4.13% | 541.8 | 1.12% | motif file (matrix) |
svg |
| 16 |
| Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer | 1e-5 | -1.364e+01 | 0.0000 | 35.0 | 6.88% | 1336.6 | 2.76% | motif file (matrix) |
svg |
| 17 |
| RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer | 1e-5 | -1.326e+01 | 0.0000 | 66.0 | 12.97% | 3420.4 | 7.07% | motif file (matrix) |
svg |
| 18 |
| Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer | 1e-5 | -1.297e+01 | 0.0001 | 100.0 | 19.65% | 6001.5 | 12.40% | motif file (matrix) |
svg |
| 19 |
| NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer | 1e-4 | -1.100e+01 | 0.0004 | 66.0 | 12.97% | 3670.0 | 7.59% | motif file (matrix) |
svg |
| 20 |
| TCF4(bHLH)/SHSY5Y-TCF4-ChIP-Seq(GSE96915)/Homer | 1e-4 | -1.077e+01 | 0.0005 | 124.0 | 24.36% | 8280.6 | 17.11% | motif file (matrix) |
svg |
| 21 |
| Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer | 1e-4 | -1.065e+01 | 0.0005 | 11.0 | 2.16% | 215.9 | 0.45% | motif file (matrix) |
svg |
| 22 |
| STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer | 1e-4 | -1.058e+01 | 0.0005 | 31.0 | 6.09% | 1290.7 | 2.67% | motif file (matrix) |
svg |
| 23 |
| HIC1(Zf)/Treg-ZBTB29-ChIP-Seq(GSE99889)/Homer | 1e-4 | -1.013e+01 | 0.0007 | 168.0 | 33.01% | 12148.9 | 25.11% | motif file (matrix) |
svg |
| 24 |
| STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer | 1e-4 | -1.002e+01 | 0.0008 | 34.0 | 6.68% | 1523.6 | 3.15% | motif file (matrix) |
svg |
| 25 |
| Twist2(bHLH)/Myoblast-Twist2.Ty1-ChIP-Seq(GSE127998)/Homer | 1e-4 | -9.325e+00 | 0.0015 | 139.0 | 27.31% | 9819.5 | 20.30% | motif file (matrix) |
svg |
| 26 |
| NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer | 1e-3 | -9.153e+00 | 0.0017 | 120.0 | 23.58% | 8249.0 | 17.05% | motif file (matrix) |
svg |
| 27 |
| BHLHA15(bHLH)/NIH3T3-BHLHB8.HA-ChIP-Seq(GSE119782)/Homer | 1e-3 | -9.099e+00 | 0.0018 | 113.0 | 22.20% | 7675.9 | 15.87% | motif file (matrix) |
svg |
| 28 |
| Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer | 1e-3 | -8.967e+00 | 0.0020 | 87.0 | 17.09% | 5577.2 | 11.53% | motif file (matrix) |
svg |
| 29 |
| Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer | 1e-3 | -8.806e+00 | 0.0022 | 52.0 | 10.22% | 2899.9 | 5.99% | motif file (matrix) |
svg |
| 30 |
| NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer | 1e-3 | -8.741e+00 | 0.0023 | 10.0 | 1.96% | 223.6 | 0.46% | motif file (matrix) |
svg |
| 31 |
| Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer | 1e-3 | -8.666e+00 | 0.0024 | 9.0 | 1.77% | 183.7 | 0.38% | motif file (matrix) |
svg |
| 32 |
| RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer | 1e-3 | -8.542e+00 | 0.0026 | 58.0 | 11.39% | 3380.4 | 6.99% | motif file (matrix) |
svg |
| 33 |
| NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer | 1e-3 | -8.496e+00 | 0.0027 | 71.0 | 13.95% | 4386.8 | 9.07% | motif file (matrix) |
svg |
| 34 |
| Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer | 1e-3 | -8.068e+00 | 0.0039 | 52.0 | 10.22% | 2991.0 | 6.18% | motif file (matrix) |
svg |
| 35 |
| ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer | 1e-3 | -7.863e+00 | 0.0047 | 47.0 | 9.23% | 2645.4 | 5.47% | motif file (matrix) |
svg |
| 36 |
| RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer | 1e-3 | -7.623e+00 | 0.0058 | 65.0 | 12.77% | 4051.2 | 8.37% | motif file (matrix) |
svg |
| 37 |
| RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer | 1e-3 | -7.617e+00 | 0.0058 | 81.0 | 15.91% | 5326.0 | 11.01% | motif file (matrix) |
svg |
| 38 |
| MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer | 1e-3 | -7.230e+00 | 0.0082 | 71.0 | 13.95% | 4590.6 | 9.49% | motif file (matrix) |
svg |
| 39 |
| Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer | 1e-3 | -7.203e+00 | 0.0082 | 139.0 | 27.31% | 10299.3 | 21.29% | motif file (matrix) |
svg |
| 40 |
| PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer | 1e-2 | -6.892e+00 | 0.0109 | 21.0 | 4.13% | 925.4 | 1.91% | motif file (matrix) |
svg |
| 41 |
| Hoxd13(Homeobox)/ChickenMSG-Hoxd13.Flag-ChIP-Seq(GSE86088)/Homer | 1e-2 | -6.553e+00 | 0.0149 | 89.0 | 17.49% | 6188.1 | 12.79% | motif file (matrix) |
svg |
| 42 |
| NFIL3(bZIP)/HepG2-NFIL3-ChIP-Seq(Encode)/Homer | 1e-2 | -6.521e+00 | 0.0150 | 34.0 | 6.68% | 1854.5 | 3.83% | motif file (matrix) |
svg |
| 43 |
| IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer | 1e-2 | -6.460e+00 | 0.0156 | 26.0 | 5.11% | 1295.8 | 2.68% | motif file (matrix) |
svg |
| 44 |
| KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer | 1e-2 | -6.433e+00 | 0.0156 | 101.0 | 19.84% | 7221.6 | 14.93% | motif file (matrix) |
svg |
| 45 |
| c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-2 | -6.433e+00 | 0.0156 | 22.0 | 4.32% | 1028.0 | 2.12% | motif file (matrix) |
svg |
| 46 |
| Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer | 1e-2 | -6.420e+00 | 0.0156 | 27.0 | 5.30% | 1368.6 | 2.83% | motif file (matrix) |
svg |
| 47 |
| STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer | 1e-2 | -6.400e+00 | 0.0156 | 67.0 | 13.16% | 4416.0 | 9.13% | motif file (matrix) |
svg |
| 48 |
| Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer | 1e-2 | -6.334e+00 | 0.0158 | 81.0 | 15.91% | 5570.7 | 11.51% | motif file (matrix) |
svg |
| 49 |
| Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer | 1e-2 | -6.151e+00 | 0.0186 | 101.0 | 19.84% | 7286.4 | 15.06% | motif file (matrix) |
svg |
| 50 |
| Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer | 1e-2 | -6.030e+00 | 0.0206 | 52.0 | 10.22% | 3285.1 | 6.79% | motif file (matrix) |
svg |
| 51 |
| Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer | 1e-2 | -6.009e+00 | 0.0206 | 84.0 | 16.50% | 5887.7 | 12.17% | motif file (matrix) |
svg |
| 52 |
| ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer | 1e-2 | -5.952e+00 | 0.0214 | 115.0 | 22.59% | 8534.6 | 17.64% | motif file (matrix) |
svg |
| 53 |
| Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer | 1e-2 | -5.952e+00 | 0.0214 | 56.0 | 11.00% | 3614.1 | 7.47% | motif file (matrix) |
svg |
| 54 |
| CTCF-SatelliteElement(Zf?)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-2 | -5.948e+00 | 0.0214 | 5.0 | 0.98% | 88.4 | 0.18% | motif file (matrix) |
svg |
| 55 |
| Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer | 1e-2 | -5.946e+00 | 0.0214 | 21.0 | 4.13% | 1002.9 | 2.07% | motif file (matrix) |
svg |
| 56 |
| NFE2L2(bZIP)/HepG2-NFE2L2-ChIP-Seq(Encode)/Homer | 1e-2 | -5.934e+00 | 0.0214 | 9.0 | 1.77% | 271.0 | 0.56% | motif file (matrix) |
svg |
| 57 |
| Pitx1:Ebox(Homeobox,bHLH)/Hindlimb-Pitx1-ChIP-Seq(GSE41591)/Homer | 1e-2 | -5.901e+00 | 0.0214 | 14.0 | 2.75% | 556.9 | 1.15% | motif file (matrix) |
svg |
| 58 |
| Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer | 1e-2 | -5.747e+00 | 0.0235 | 35.0 | 6.88% | 2022.4 | 4.18% | motif file (matrix) |
svg |
| 59 |
| Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer | 1e-2 | -5.662e+00 | 0.0252 | 123.0 | 24.17% | 9305.6 | 19.23% | motif file (matrix) |
svg |
| 60 |
| OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer | 1e-2 | -5.472e+00 | 0.0300 | 2.0 | 0.39% | 9.8 | 0.02% | motif file (matrix) |
svg |
| 61 |
| MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer | 1e-2 | -5.433e+00 | 0.0307 | 25.0 | 4.91% | 1329.0 | 2.75% | motif file (matrix) |
svg |
| 62 |
| HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer | 1e-2 | -5.349e+00 | 0.0328 | 62.0 | 12.18% | 4208.8 | 8.70% | motif file (matrix) |
svg |
| 63 |
| FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer | 1e-2 | -5.292e+00 | 0.0342 | 38.0 | 7.47% | 2312.2 | 4.78% | motif file (matrix) |
svg |
| 64 |
| Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer | 1e-2 | -5.244e+00 | 0.0353 | 68.0 | 13.36% | 4722.6 | 9.76% | motif file (matrix) |
svg |
| 65 |
| p63(p53)/Keratinocyte-p63-ChIP-Seq(GSE17611)/Homer | 1e-2 | -5.229e+00 | 0.0353 | 31.0 | 6.09% | 1792.0 | 3.70% | motif file (matrix) |
svg |
| 66 |
| Hoxa13(Homeobox)/ChickenMSG-Hoxa13.Flag-ChIP-Seq(GSE86088)/Homer | 1e-2 | -5.213e+00 | 0.0353 | 134.0 | 26.33% | 10400.9 | 21.50% | motif file (matrix) |
svg |
| 67 |
| Hoxa9(Homeobox)/ChickenMSG-Hoxa9.Flag-ChIP-Seq(GSE86088)/Homer | 1e-2 | -5.186e+00 | 0.0357 | 147.0 | 28.88% | 11563.9 | 23.90% | motif file (matrix) |
svg |
| 68 |
| Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer | 1e-2 | -5.179e+00 | 0.0357 | 98.0 | 19.25% | 7269.1 | 15.02% | motif file (matrix) |
svg |
| 69 |
| JunD(bZIP)/K562-JunD-ChIP-Seq/Homer | 1e-2 | -5.177e+00 | 0.0357 | 9.0 | 1.77% | 305.1 | 0.63% | motif file (matrix) |
svg |
| 70 |
| MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer | 1e-2 | -5.107e+00 | 0.0370 | 87.0 | 17.09% | 6347.1 | 13.12% | motif file (matrix) |
svg |
| 71 |
| Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer | 1e-2 | -4.999e+00 | 0.0406 | 22.0 | 4.32% | 1162.8 | 2.40% | motif file (matrix) |
svg |
| 72 |
| Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer | 1e-2 | -4.945e+00 | 0.0423 | 7.0 | 1.38% | 208.0 | 0.43% | motif file (matrix) |
svg |
| 73 |
| Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer | 1e-2 | -4.876e+00 | 0.0447 | 31.0 | 6.09% | 1838.9 | 3.80% | motif file (matrix) |
svg |
| 74 |
| Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer | 1e-2 | -4.842e+00 | 0.0456 | 80.0 | 15.72% | 5818.4 | 12.03% | motif file (matrix) |
svg |