Homer de novo Motif Results (atac_hfd_open_motif/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 509
Total background sequences = 48511
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 A C T G A T G C A G T C G T A C A G C T T A G C A G C T C T G A T A C G A G C T A T C G A T C G 1e-25-5.960e+016.68%0.51%40.5bp (57.4bp)CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer(0.858)
More Information | Similar Motifs Found		motif file (matrix)
2 A C G T T A G C C G T A T G C A T G C A G T A C C G T A C G A T G A C T A T G C A G T C G T C A 1e-18-4.275e+0113.36%3.75%57.9bp (60.6bp)TEAD2/MA1121.1/Jaspar(0.798)
More Information | Similar Motifs Found		motif file (matrix)
3 G A C T A G T C C G A T A C T G A T G C G T A C C G T A C T G A 1e-15-3.513e+0135.36%20.00%52.2bp (64.2bp)NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer(0.941)
More Information | Similar Motifs Found		motif file (matrix)
4 T G C A A C G T A C T G C G T A T A C G A C G T A G T C G T C A 1e-14-3.449e+0112.57%3.98%49.7bp (61.7bp)AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer(0.974)
More Information | Similar Motifs Found		motif file (matrix)
5 A G T C C T G A C T A G T A C G T A G C G A T C G C A T A C T G T A C G T A C G A G T C C G A T 1e-13-3.133e+0112.57%4.27%52.4bp (66.6bp)Zfx/MA0146.2/Jaspar(0.710)
More Information | Similar Motifs Found		motif file (matrix)
6 G T C A G C T A A G C T C T G A C T A G G T C A G T C A C G T A G T A C G T C A C A G T A G T C 1e-13-3.118e+013.93%0.38%53.5bp (66.1bp)IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer(0.705)
More Information | Similar Motifs Found		motif file (matrix)
7 C G T A A T C G A T G C C T G A C T G A G T C A A G C T A G C T G T A C A G T C C T G A A G C T 1e-13-3.013e+013.93%0.41%45.6bp (59.0bp)TEAD4/MA0809.1/Jaspar(0.701)
More Information | Similar Motifs Found		motif file (matrix)
8 * T G C A A G C T C A G T C A T G A T C G A T G C G A C T A T G C A G T C G A T C C G T A A T C G 1e-11-2.688e+015.70%1.12%53.8bp (63.6bp)NFY(CCAAT)/Promoter/Homer(0.670)
More Information | Similar Motifs Found		motif file (matrix)
9 * G T A C C G A T A C T G A C T G T C A G A G T C A C G T A G T C A G C T C T A G 1e-11-2.675e+0111.00%3.80%52.5bp (66.0bp)Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer(0.666)
More Information | Similar Motifs Found		motif file (matrix)
10 * G A C T G A T C A G T C A C G T A T G C G A C T A C T G A G T C C G T A A C T G C T A G G T A C 1e-11-2.549e+018.25%2.40%56.9bp (61.4bp)Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer(0.662)
More Information | Similar Motifs Found		motif file (matrix)
11 * A T C G A G C T A G T C A C G T A G T C A G T C A C G T C A T G A C T G A C T G A C T G G T C A 1e-10-2.447e+011.96%0.08%56.1bp (58.0bp)EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer(0.747)
More Information | Similar Motifs Found		motif file (matrix)
12 * C G T A C G T A A C T G A G T C C G T A G T A C C G A T A G T C C G T A G T A C G T A C A C G T 1e-10-2.414e+011.57%0.04%58.9bp (58.1bp)Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer(0.781)
More Information | Similar Motifs Found		motif file (matrix)
13 * C G A T T C A G C T G A T C G A G T C A G C T A T C A G T C G A G A T C G C A T 1e-10-2.411e+0115.13%6.73%52.4bp (62.5bp)PB0022.1_Gata5_1/Jaspar(0.621)
More Information | Similar Motifs Found		motif file (matrix)
14 * A C G T A C T G G T C A C T G A A C G T A C G T A G T C G T C A C A G T G T A C C T A G C G A T 1e-10-2.324e+011.77%0.06%55.0bp (57.4bp)PB0171.1_Sox18_2/Jaspar(0.697)
More Information | Similar Motifs Found		motif file (matrix)
15 * C T G A A C T G C T G A T A C G C A G T A G T C C T A G A C G T A C T G A C G T 1e-10-2.303e+016.29%1.59%47.9bp (61.0bp)KLF13/MA0657.1/Jaspar(0.643)
More Information | Similar Motifs Found		motif file (matrix)
16 * A T C G G T C A C G T A A T C G A C G T A G T C A C G T A C T G A G T C A C G T A C G T A G T C 1e-9-2.210e+011.38%0.03%38.0bp (62.7bp)POL008.1_DCE_S_I/Jaspar(0.608)
More Information | Similar Motifs Found		motif file (matrix)
17 * C G T A C G T A C G T A A C T G A G T C G A C T C G T A C G A T C T G A C G T A C G T A A C G T 1e-9-2.142e+010.79%0.00%56.7bp (0.0bp)Hoxc9/MA0485.1/Jaspar(0.722)
More Information | Similar Motifs Found		motif file (matrix)
18 * C T G A A G T C G A C T A C T G G A C T A C G T C A T G C G T A A G T C A C T G 1e-8-2.056e+015.89%1.57%54.2bp (59.9bp)Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer(0.734)
More Information | Similar Motifs Found		motif file (matrix)
19 * C G T A G T A C C G T A G T C A C G T A A T G C C T G A A G T C C G A T A C T G A T G C G T C A 1e-8-2.038e+011.38%0.04%57.2bp (53.4bp)Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer(0.685)
More Information | Similar Motifs Found		motif file (matrix)
20 * C T G A T A G C A G T C A T G C G T A C G C T A G A T C G T A C A G T C C G T A 1e-8-1.990e+016.48%1.91%50.9bp (56.8bp)KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer(0.866)
More Information | Similar Motifs Found		motif file (matrix)
21 * A T G C A G C T C G T A C T G A C T G A A C T G C G T A G C T A C T G A G C T A A T G C C G T A 1e-8-1.981e+012.95%0.39%46.1bp (60.7bp)FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer(0.757)
More Information | Similar Motifs Found		motif file (matrix)
22 * G T A C C G A T C T A G C G T A G T A C A C G T A C T G A C T G A C G T G T A C 1e-8-1.974e+013.73%0.66%53.4bp (61.7bp)NFYA/MA0060.3/Jaspar(0.716)
More Information | Similar Motifs Found		motif file (matrix)
23 * A G T C G T C A A C T G T C A G A T C G C G T A A T G C A C G T A G T C G T C A A C G T A C G T 1e-8-1.944e+013.34%0.53%50.6bp (62.2bp)PB0203.1_Zfp691_2/Jaspar(0.603)
More Information | Similar Motifs Found		motif file (matrix)
24 * A C G T A G T C A C G T A C G T A C G T C G T A G T A C A T C G A G T C C G T A A C T G C G T A 1e-8-1.867e+010.98%0.01%56.4bp (52.2bp)Foxa2/MA0047.2/Jaspar(0.634)
More Information | Similar Motifs Found		motif file (matrix)
25 * C G A T A G C T C G A T A G T C G T C A C T G A A G T C A C T G 1e-7-1.787e+0123.58%14.30%52.7bp (65.2bp)NFATC1/MA0624.1/Jaspar(0.775)
More Information | Similar Motifs Found		motif file (matrix)
26 * T A G C A G C T A G T C A C G T A G T C A G T C A G T C A G T C C G T A C T A G G T A C G C A T 1e-7-1.686e+012.16%0.23%44.1bp (63.9bp)MZF1/MA0056.1/Jaspar(0.714)
More Information | Similar Motifs Found		motif file (matrix)
27 * A G T C C G A T T A C G A G T C G A C T A C T G A T C G G T A C G A T C C T G A 1e-6-1.451e+015.70%1.96%48.3bp (65.6bp)Bcl11a(Zf)/HSPC-BCL11A-ChIP-Seq(GSE104676)/Homer(0.785)
More Information | Similar Motifs Found		motif file (matrix)
28 * T G C A C G A T A T C G C T G A G A T C A C T G A G C T G A T C G C T A C G A T 1e-6-1.449e+016.29%2.30%57.8bp (59.2bp)ATF7/MA0834.1/Jaspar(0.952)
More Information | Similar Motifs Found		motif file (matrix)
29 * C G T A A T G C A G T C C G T A A G T C C G T A C G T A C T G A 1e-5-1.221e+017.66%3.47%54.5bp (64.6bp)RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer(0.883)
More Information | Similar Motifs Found		motif file (matrix)
30 * A G T C A C G T A C G T A G T C C T A G A C T G A G T C C A T G A G T C C G A T A C T G A C T G 1e-4-9.811e+000.39%0.00%18.7bp (0.0bp)POL008.1_DCE_S_I/Jaspar(0.599)
More Information | Similar Motifs Found		motif file (matrix)
31 * A C G T A C T G C G T A A C T G C G T A A C T G A C T G A C T G G T A C G T C A A G T C C G T A 1e-4-9.811e+000.39%0.00%62.8bp (37.1bp)HIC2/MA0738.1/Jaspar(0.610)
More Information | Similar Motifs Found		motif file (matrix)
32 * A G T C A C T G C G T A A C G T C G T A A C T G A C T G A C T G C G T A A C T G 1e-2-6.630e+000.59%0.04%45.7bp (47.6bp)PB0128.1_Gcm1_2/Jaspar(0.616)
More Information | Similar Motifs Found		motif file (matrix)
33 * A G T C C G T A A C T G A G T C C G T A A C T G A C G T A C T G C G T A A C G T C G T A A C T G 1e-1-4.560e+000.20%0.00%52.7bp (0.0bp)Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer(0.675)
More Information | Similar Motifs Found		motif file (matrix)