Homer de novo Motif Results (4a_Sal_k3/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
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More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 12267
Total background sequences = 37056
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 T C G A T C G A A G T C C G T A A C T G C G T A C G A T A C T G A C T G G A T C 1e-461-1.062e+0328.94%13.12%280.2bp (244.1bp)NEUROG2(var.2)/MA1642.1/Jaspar(0.957)
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motif file (matrix)
2 T A C G C A T G T C G A C G A T A C T G G C T A T A C G C G A T T G A C G C T A A G C T G T C A 1e-410-9.458e+0230.37%14.88%281.5bp (241.3bp)Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer(0.988)
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motif file (matrix)
3 C A T G G T A C G A C T C G T A C G T A T C G A G C T A C G T A G C A T C T G A C T A G G T A C 1e-306-7.064e+0221.58%10.06%290.1bp (244.5bp)Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer(0.979)
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motif file (matrix)
4 C T A G A G C T G A C T C T A G A G T C A G T C G C T A C G A T C T A G C T A G G T A C C T G A 1e-290-6.680e+029.51%2.70%265.7bp (236.0bp)RFX3/MA0798.2/Jaspar(0.952)
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motif file (matrix)
5 G T A C G A T C C G A T T A G C G T A C A G T C T G C A A G T C C T G A T A G C 1e-284-6.541e+0241.48%26.44%310.8bp (234.7bp)Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer(0.922)
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motif file (matrix)
6 T A C G C G A T A C G T T G C A A C G T C T A G G A C T C G T A C G T A A G T C 1e-186-4.291e+028.82%3.21%297.8bp (242.4bp)HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer(0.975)
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motif file (matrix)
7 T C A G A G T C C G A T A C T G G A T C G A C T C T G A C T G A C G T A G C A T 1e-144-3.318e+0232.50%22.42%311.4bp (249.6bp)NFIA/MA0670.1/Jaspar(0.749)
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motif file (matrix)
8 C G A T C T A G T A G C G C T A A C T G A T G C T G A C C G A T T A C G A G T C 1e-142-3.280e+0242.85%31.87%323.9bp (258.9bp)Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer(0.656)
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motif file (matrix)
9 T C G A T C G A C T A G T G A C G C A T C T A G A G C T A C G T 1e-136-3.141e+0262.38%51.21%311.8bp (245.4bp)POL009.1_DCE_S_II/Jaspar(0.816)
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motif file (matrix)
10 G A T C C G T A A T G C C G T A A T G C C G A T T A C G G A C T T A C G C G A T 1e-113-2.612e+0242.12%32.33%313.2bp (246.0bp)PB0207.1_Zic3_2/Jaspar(0.604)
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motif file (matrix)
11 G C A T G A C T A C G T A C T G T A G C G T C A T G C A C G T A C A T G G T A C 1e-102-2.360e+0248.15%38.57%315.2bp (250.8bp)Oct11(POU,Homeobox)/NCIH1048-POU2F3-ChIP-seq(GSE115123)/Homer(0.739)
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motif file (matrix)
12 T C A G T G C A C T G A C A T G A G T C C A G T C A T G A T C G T G A C C G T A 1e-98-2.269e+0255.31%45.79%305.3bp (250.6bp)HIC1(Zf)/Treg-ZBTB29-ChIP-Seq(GSE99889)/Homer(0.839)
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motif file (matrix)
13 C G A T A T C G C T G A C T A G C T G A T G C A T G C A C G A T T A C G C G A T C A T G A G T C 1e-84-1.957e+0222.42%15.66%314.5bp (245.4bp)TEAD2/MA1121.1/Jaspar(0.681)
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motif file (matrix)
14 G A C T A G C T G C A T G A T C G T C A G A T C G T C A A T G C G A T C T G A C 1e-75-1.748e+0224.88%18.17%317.6bp (242.6bp)PB0013.1_Eomes_1/Jaspar(0.881)
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motif file (matrix)
15 G T C A C T G A T G A C C T A G A T C G G C T A C A T G G A T C 1e-74-1.707e+0249.84%41.65%319.6bp (254.3bp)POL013.1_MED-1/Jaspar(0.734)
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motif file (matrix)
16 G T A C C G A T T A G C G A T C G A C T A T G C A G T C A T C G G C A T A C T G 1e-56-1.297e+0224.88%19.05%328.3bp (241.9bp)ZNF263/MA0528.2/Jaspar(0.721)
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motif file (matrix)
17 G T C A T C G A T A G C T C A G A G T C G A C T A G T C G A T C A T G C G A C T 1e-49-1.135e+0234.82%28.65%317.2bp (243.9bp)POL013.1_MED-1/Jaspar(0.711)
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motif file (matrix)
18 A C T G A G T C G A C T A G C T G A C T A G T C G A T C A T C G C G A T C A T G 1e-48-1.109e+0239.84%33.50%318.1bp (245.8bp)IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer(0.660)
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motif file (matrix)
19 T C G A C T G A T G A C G T C A A T C G G T A C G C A T A T C G T A G C G C A T A T C G A C G T 1e-48-1.106e+029.82%6.35%280.2bp (248.1bp)MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer(0.823)
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motif file (matrix)
20 G A C T T A C G G T A C G T A C G T C A A G C T A G T C G C A T C G T A T C A G G C A T A T C G 1e-43-1.007e+022.36%0.92%266.8bp (241.9bp)CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer(0.835)
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motif file (matrix)
21 T A G C C T A G A T C G C T G A T C A G C G T A C T A G G C T A T C G A G C A T 1e-43-9.940e+0138.98%33.02%325.7bp (244.7bp)PRDM1/MA0508.3/Jaspar(0.621)
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motif file (matrix)
22 T G A C C G T A A C G T C T A G G T C A C T G A C G A T C G T A G A C T A C G T G A T C G T C A 1e-35-8.191e+011.51%0.51%271.0bp (224.7bp)OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer(0.916)
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motif file (matrix)
23 * A C T G A C G T A C T G A G T C A C T G A C T G A G T C C G A T C G T A A C G T A C T G A G T C 1e-2-6.104e+000.08%0.03%322.2bp (203.1bp)ZFP57/MA1583.1/Jaspar(0.732)
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motif file (matrix)