Homer de novo Motif Results (motif/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 70344
Total background sequences = 69937
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 T C G A A C G T C A T G C G T A A T G C C G A T G T A C C T G A A C G T G T A C 1e-3802-8.755e+0316.87%3.96%53.0bp (59.5bp)BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer(0.998)
More Information | Similar Motifs Found
motif file (matrix)
2 C T A G G T A C A G T C G T A C A G T C A G T C G A C T C T G A A T C G G C A T A C T G C A T G 1e-1674-3.855e+034.35%0.52%49.5bp (58.7bp)CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer(0.919)
More Information | Similar Motifs Found
motif file (matrix)
3 C A T G A G T C C G A T A C T G T A G C A G T C C G T A C T G A T G C A C G A T 1e-977-2.252e+0337.97%26.39%55.2bp (60.8bp)NFIX/MA0671.1/Jaspar(0.957)
More Information | Similar Motifs Found
motif file (matrix)
4 C A T G G C A T C G A T A C G T A G C T A G T C A T G C C G T A 1e-921-2.123e+0352.22%40.05%55.7bp (61.6bp)NFATC2/MA0152.1/Jaspar(0.952)
More Information | Similar Motifs Found
motif file (matrix)
5 T A C G C G T A A T C G G A C T G C T A C G T A G C A T C G A T C T G A A T G C 1e-424-9.778e+0217.51%11.81%55.7bp (58.6bp)Dlx3(Homeobox)/Kerainocytes-Dlx3-ChIP-Seq(GSE89884)/Homer(0.817)
More Information | Similar Motifs Found
motif file (matrix)
6 A C G T A C G T C G T A A G T C T C A G G A C T G T C A C G T A A G C T G A T C 1e-413-9.519e+0211.26%6.77%55.0bp (57.3bp)NFIL3(bZIP)/HepG2-NFIL3-ChIP-Seq(Encode)/Homer(0.942)
More Information | Similar Motifs Found
motif file (matrix)
7 T C G A G T C A G C T A A G T C C T G A A G C T A G T C G T A C 1e-369-8.501e+0227.69%21.14%56.5bp (59.6bp)FOXD2/MA0847.1/Jaspar(0.808)
More Information | Similar Motifs Found
motif file (matrix)
8 A T G C C G A T T A G C G C A T A T C G C T G A T A C G A G T C 1e-311-7.171e+0242.32%35.42%56.8bp (61.4bp)ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer(0.746)
More Information | Similar Motifs Found
motif file (matrix)
9 C G T A A G C T A C G T A G T C A G T C C G T A A G C T A C G T A G T C A T C G C G T A A G C T 1e-302-6.962e+020.30%0.00%56.8bp (45.4bp)TEAD3(TEA)/HepG2-TEAD3-ChIP-Seq(Encode)/Homer(0.673)
More Information | Similar Motifs Found
motif file (matrix)
10 A T G C G A T C C G T A T C G A A G C T C G A T T C A G T A C G G T A C C A T G 1e-279-6.443e+0219.30%14.36%56.1bp (60.2bp)PH0109.1_Nkx1-1/Jaspar(0.761)
More Information | Similar Motifs Found
motif file (matrix)
11 G C T A G C T A C T G A G T A C A G T C C G T A A G T C C G T A C A T G T G C A 1e-272-6.280e+023.53%1.60%55.2bp (58.9bp)RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer(0.964)
More Information | Similar Motifs Found
motif file (matrix)
12 A T G C T G A C C G T A C T G A C T G A T C A G C G A T G T C A G T C A T C G A A G T C C G T A 1e-259-5.974e+022.15%0.77%54.5bp (58.7bp)NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer(0.890)
More Information | Similar Motifs Found
motif file (matrix)
13 T C G A T A C G T G C A A C T G C T A G T C A G T G C A C T A G A G T C C A T G 1e-239-5.509e+0229.10%23.68%55.6bp (59.0bp)PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer(0.767)
More Information | Similar Motifs Found
motif file (matrix)
14 G T A C T C A G A C T G C A T G G T A C C G A T T A C G A G C T 1e-231-5.324e+0223.88%18.93%56.8bp (60.7bp)ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer(0.740)
More Information | Similar Motifs Found
motif file (matrix)
15 C T A G C T A G A C T G A C T G G A T C A C T G C A T G C T A G T A C G G A T C 1e-214-4.949e+0214.49%10.67%54.9bp (54.6bp)KLF5/MA0599.1/Jaspar(0.977)
More Information | Similar Motifs Found
motif file (matrix)
16 A G T C G A C T G C T A C G A T C G A T G C A T G C T A C G A T C T G A C T A G G T A C G A T C 1e-86-1.998e+021.17%0.54%56.1bp (55.8bp)MEF2B/MA0660.1/Jaspar(0.933)
More Information | Similar Motifs Found
motif file (matrix)
17 A G T C A C G T C G T A T G C A G C A T C T A G C T A G T C A G T G A C G A T C 1e-61-1.427e+027.05%5.55%57.0bp (58.7bp)BSX/MA0876.1/Jaspar(0.758)
More Information | Similar Motifs Found
motif file (matrix)
18 A C G T T G C A C T G A G C A T T A G C G T C A A C G T A G T C T C A G G T C A T C G A G A C T 1e-54-1.252e+020.08%0.00%52.6bp (64.8bp)EVX1/MA0887.1/Jaspar(0.654)
More Information | Similar Motifs Found
motif file (matrix)
19 G T C A A G T C A G T C T C A G A G T C A G C T C G T A A C T G C G T A A G T C A G T C G T C A 1e-36-8.511e+010.10%0.01%48.6bp (57.3bp)Smad4/MA1153.1/Jaspar(0.650)
More Information | Similar Motifs Found
motif file (matrix)