Homer de novo Motif Results (motif/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
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More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 70710
Total background sequences = 70162
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 C A T G T C G A A G C T C A T G C G T A A T G C C G A T G T A C T C G A A G C T 1e-4305-9.914e+0320.00%4.99%52.9bp (60.2bp)BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer(0.998)
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motif file (matrix)
2 C T A G G T A C G A T C G T C A A G C T A T G C G A C T C T G A A T C G G C A T C T A G C A T G 1e-1861-4.286e+034.05%0.37%48.1bp (57.8bp)CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer(0.922)
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motif file (matrix)
3 A C T G A G C T C G A T A C T G A T G C G A T C C G T A T C G A T C G A A C G T 1e-903-2.081e+0327.28%17.50%55.1bp (60.9bp)NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer(0.968)
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motif file (matrix)
4 C G A T A C G T A C G T A G C T A G T C A G T C C G T A C T A G 1e-885-2.039e+0350.86%39.01%55.8bp (61.3bp)NFATC2/MA0152.1/Jaspar(0.977)
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motif file (matrix)
5 A C T G G A T C A T G C C G T A T C A G G A C T A G T C C G T A C A T G G A T C 1e-450-1.037e+0339.36%31.27%56.0bp (61.9bp)Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer(0.723)
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motif file (matrix)
6 A G C T C A T G C G T A A T G C T C A G G C A T G T A C C G T A A G C T G A T C 1e-446-1.028e+038.49%4.54%54.3bp (57.7bp)Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer(0.968)
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motif file (matrix)
7 T C G A T G C A T C G A A T G C G C T A T C A G A T G C G A T C A G T C C G A T 1e-427-9.835e+0258.77%50.48%56.0bp (60.5bp)ZNF341(Zf)/EBV-ZNF341-ChIP-Seq(GSE113194)/Homer(0.692)
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motif file (matrix)
8 A G T C A G T C C G T A C T G A C T G A T C A G G C T A G T C A C G T A T C G A A G T C C G T A 1e-377-8.700e+023.11%1.11%54.3bp (60.4bp)NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer(0.917)
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motif file (matrix)
9 G C T A T C G A T C G A T G A C A T G C C T G A T G A C C T G A T C A G T C G A 1e-339-7.822e+026.86%3.73%54.6bp (57.9bp)RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer(0.956)
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motif file (matrix)
10 T A G C T A C G G C T A T A C G T C A G T C A G T C G A T A C G A T G C C T A G 1e-261-6.029e+0238.91%32.72%55.8bp (59.0bp)ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer(0.733)
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motif file (matrix)
11 T A G C G C T A A T G C G A C T A G C T A G T C G A T C C T A G C T A G T C A G T G C A T C G A 1e-250-5.777e+0240.70%34.57%55.2bp (59.7bp)Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer(0.890)
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motif file (matrix)
12 C T G A C T A G C T A G C T A G G A T C A C T G A C T G C A T G T C A G G A T C 1e-245-5.648e+0210.39%6.97%54.4bp (54.8bp)KLF5/MA0599.1/Jaspar(0.940)
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motif file (matrix)
13 C G T A A G C T A C G T A G T C A T G C C G T A A G C T A C G T A G T C A T G C C G T A A G C T 1e-208-4.798e+020.28%0.01%55.0bp (58.6bp)TEAD3(TEA)/HepG2-TEAD3-ChIP-Seq(Encode)/Homer(0.696)
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motif file (matrix)
14 G C T A C T G A A G T C A G T C C G T A A T C G G T C A A T C G 1e-180-4.157e+0210.47%7.47%57.1bp (60.1bp)Hand1::Tcf3/MA0092.1/Jaspar(0.806)
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motif file (matrix)
15 A T C G G A T C C G A T C A T G G C A T T C G A G C T A G C T A T G C A T C G A G A T C G C T A 1e-135-3.124e+023.89%2.34%55.3bp (57.6bp)FoxD3(forkhead)/ZebrafishEmbryo-Foxd3.biotin-ChIP-seq(GSE106676)/Homer(0.825)
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motif file (matrix)
16 A G C T A C G T T C G A A C G T C T A G G T C A G T C A C G T A 1e-126-2.923e+024.48%2.86%57.4bp (58.8bp)HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer(0.878)
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motif file (matrix)
17 G T A C G A C T G C T A C G A T C G A T G C A T C G T A G C A T C G T A C T A G T G A C G A T C 1e-102-2.350e+021.56%0.76%56.2bp (55.8bp)MEF2A/MA0052.3/Jaspar(0.921)
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motif file (matrix)
18 C T A G C G T A A C G T C A T G C T G A G A C T G A C T A T G C A T G C T C G A 1e-70-1.630e+023.32%2.26%56.7bp (60.4bp)PH0037.1_Hdx/Jaspar(0.717)
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motif file (matrix)
19 A G T C G A C T T C G A T C A G A G T C C T A G A C T G A C G T T C G A T C G A G A T C A C T G 1e-66-1.530e+020.07%0.00%44.3bp (25.9bp)Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer(0.616)
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motif file (matrix)