Homer de novo Motif Results (MF_hfd_open_motif/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
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More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 835
Total background sequences = 47490
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 A C T G G A T C A G C T C G T A C G T A C T G A G C T A G C T A G A C T C G T A T C A G G T A C 1e-81-1.873e+0218.32%2.50%54.1bp (65.5bp)Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer(0.988)
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motif file (matrix)
2 C T G A A T G C G T C A T A C G A G T C C G A T A C T G G A C T A G C T A C T G 1e-73-1.700e+0241.56%15.24%50.2bp (71.1bp)Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer(0.959)
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motif file (matrix)
3 C G A T A T C G C T A G G C T A C T G A A G C T A C T G G A T C 1e-35-8.169e+0122.51%8.30%52.1bp (63.7bp)TEAD3(TEA)/HepG2-TEAD3-ChIP-Seq(Encode)/Homer(0.962)
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motif file (matrix)
4 T G A C T G A C G T A C G A T C A G T C C A G T T C G A A T G C G A C T A C T G A T C G G A T C 1e-19-4.590e+018.38%2.22%49.2bp (64.9bp)BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer(0.829)
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motif file (matrix)
5 C G A T A C T G T C G A T A G C A C G T G T A C G T C A G A T C A T C G C T A G 1e-14-3.289e+0111.86%5.01%55.4bp (63.5bp)JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer(0.926)
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motif file (matrix)
6 C G A T C T A G T C A G C T A G G C A T A T C G C A G T C A T G A T C G G T A C 1e-13-3.208e+018.14%2.79%54.6bp (62.5bp)KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer(0.921)
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motif file (matrix)
7 A G T C C T G A A C T G G T A C C G T A A G T C G T C A C G T A A T C G A C G T A C G T C T A G 1e-13-3.194e+010.96%0.01%35.9bp (32.8bp)SCRT1(Zf)/HEK293-SCRT1.eGFP-ChIP-Seq(Encode)/Homer(0.608)
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motif file (matrix)
8 G T A C A C G T A C T G A C G T C T A G A C T G C G T A A G C T C G T A A C G T A G C T A C G T 1e-13-3.062e+011.08%0.02%37.0bp (32.0bp)ZNF354C/MA0130.1/Jaspar(0.662)
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motif file (matrix)
9 * A G T C G C A T C G T A C T A G C T G A A C T G A T C G A C T G T A G C C T A G 1e-11-2.634e+012.40%0.31%46.7bp (55.2bp)BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer(0.674)
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motif file (matrix)
10 * C T G A A G T C G T A C A C T G A T G C C A T G A T C G G T C A A G T C C G T A C T A G A G T C 1e-11-2.604e+011.80%0.15%44.0bp (58.5bp)REST/MA0138.2/Jaspar(0.754)
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motif file (matrix)
11 * A C T G C G T A A C T G A G T C C G A T T G C A C G T A A C G T G C T A G T A C C A G T A C G T 1e-10-2.491e+011.80%0.16%39.6bp (66.3bp)Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer(0.598)
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motif file (matrix)
12 * G T C A T A G C T G C A C A G T A T C G C T G A T G A C C G T A A G T C C A T G 1e-10-2.345e+019.58%4.33%57.9bp (63.2bp)MAFG::NFE2L1/MA0089.1/Jaspar(0.714)
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motif file (matrix)
13 * A T G C C G T A A T C G A G T C A C T G A C G T A C T G C G A T A C T G A C G T A C T G C T A G 1e-9-2.269e+011.20%0.06%58.7bp (63.8bp)PB0130.1_Gm397_2/Jaspar(0.700)
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motif file (matrix)
14 * A C G T A C G T A C T G A G C T G T C A A G T C A G T C A G C T C G T A C G T A C G T A C G T A 1e-9-2.259e+010.72%0.01%50.4bp (49.2bp)PB0075.1_Sp100_1/Jaspar(0.605)
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motif file (matrix)
15 * G T A C A C G T A T C G A T C G A G C T A T C G G A T C A G T C C G T A A G C T A G T C A C G T 1e-9-2.138e+012.63%0.50%44.0bp (69.3bp)PH0164.1_Six4/Jaspar(0.671)
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motif file (matrix)
16 * A G C T A G C T C T G A A C G T A C G T C A G T C T G A A T C G G T C A G T C A 1e-9-2.114e+013.47%0.87%42.8bp (64.5bp)FOXD2/MA0847.1/Jaspar(0.689)
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motif file (matrix)
17 * G A T C T C G A G C A T C G A T A C G T C A T G A T C G G C A T T G C A G A T C 1e-8-2.014e+013.47%0.91%46.8bp (64.4bp)MSX2/MA0708.1/Jaspar(0.656)
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motif file (matrix)
18 * A T C G C G A T A C T G A C T G A G T C C T A G C A T G G C A T A C T G A C T G T C A G A T C G 1e-8-1.968e+014.43%1.42%54.1bp (54.0bp)Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer(0.821)
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motif file (matrix)
19 * G T C A T A C G C A G T T A C G A G C T A C T G C T A G G T A C 1e-8-1.928e+0115.57%9.25%57.8bp (64.2bp)Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer(0.691)
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motif file (matrix)
20 * G A C T G T C A C G T A C G A T C G A T C G T A A G T C G A T C T A G C C G A T 1e-8-1.923e+012.28%0.41%37.0bp (58.2bp)PH0052.1_Hoxa5/Jaspar(0.839)
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motif file (matrix)
21 * A G T C C G T A A C T G A C G T C A T G C T A G A G T C A G T C 1e-8-1.907e+018.74%4.19%52.7bp (65.3bp)FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer(0.708)
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motif file (matrix)
22 * A T G C G C A T A T C G C T A G A T G C A G C T C T A G A C T G C T A G C T G A 1e-8-1.878e+016.23%2.54%53.8bp (64.3bp)ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer(0.694)
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motif file (matrix)
23 * A G T C C G T A A C T G C T A G A C T G A G T C A C G T A C G T 1e-8-1.858e+018.62%4.15%56.5bp (65.7bp)ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer(0.638)
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motif file (matrix)
24 * C G T A A G T C A C G T A C G T G T C A A T G C A G T C C G T A A T G C G T C A 1e-7-1.777e+012.63%0.61%60.0bp (58.1bp)RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer(0.760)
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motif file (matrix)
25 * A C G T A C T G A C G T A G C T A C T G A C T G A G T C C G T A 1e-7-1.630e+014.43%1.63%52.4bp (62.9bp)NFIA/MA0670.1/Jaspar(0.876)
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motif file (matrix)
26 * G C T A T C G A C G A T T C A G C G T A A G T C C G T A A T C G A G C T G T A C 1e-6-1.546e+013.11%0.94%50.3bp (64.4bp)MEIS1/MA0498.2/Jaspar(0.759)
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motif file (matrix)
27 * T C G A T C G A A C T G A C T G G A T C T A C G A T C G T A C G C T A G G A T C T G C A C T G A 1e-4-1.137e+010.60%0.03%53.5bp (46.8bp)Sp1(Zf)/Promoter/Homer(0.796)
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motif file (matrix)
28 * A C G T A G T C A C G T C G T A A C T G A C T G A G T C A C T G A C T G A C G T 1e-3-8.788e+000.24%0.00%50.4bp (31.6bp)SMAD3/MA0795.1/Jaspar(0.630)
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motif file (matrix)