Homer de novo Motif Results (eb3_vs_eb1_motif/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
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More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 28
Total background sequences = 40375
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 T C G A C G T A G T C A A G C T C T A G A G C T A T G C G T A C G T C A G A T C A C G T A C T G 1e-14-3.275e+0114.29%0.00%28.2bp (0.0bp)PB0134.1_Hnf4a_2/Jaspar(0.738)
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motif file (matrix)
2 A C G T A C G T A G C T A G T C A C G T A G T C A C T G A G T C A G T C C G T A A C G T C G T A 1e-13-3.212e+0117.86%0.02%60.4bp (82.1bp)E2F8/MA0865.1/Jaspar(0.720)
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motif file (matrix)
3 A C G T A C G T A C G T A C G T A G T C G T A C C T A G A C G T A C T G C G T A A C G T A C G T 1e-13-3.145e+0117.86%0.02%61.8bp (83.7bp)NFAT5/MA0606.1/Jaspar(0.679)
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motif file (matrix)
4 G T A C C G T A A C G T A C G T A C G T A C G T A G C T A G T C C G T A G T A C A T C G A C G T 1e-12-2.903e+0117.86%0.03%54.6bp (97.0bp)NFAT5/MA0606.1/Jaspar(0.737)
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motif file (matrix)
5 * A C T G A C G T A G C T A G T C A G C T C G T A G T A C C G T A A C T G A C G T A C T G A C G T 1e-10-2.486e+0117.86%0.07%66.4bp (88.1bp)Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer(0.618)
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motif file (matrix)
6 * A C T G A C G T A G T C C G T A C G T A A C T G A C T G A C T G A C G T C G T A A C G T C T G A 1e-10-2.316e+0114.29%0.03%28.1bp (55.5bp)RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer(0.685)
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motif file (matrix)
7 * A G C T A C G T A G T C G T A C C G T A T A C G A C T G A C G T A G T C A G T C A C G T C G T A 1e-9-2.166e+0114.29%0.04%39.0bp (62.3bp)Esrra/MA0592.2/Jaspar(0.691)
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motif file (matrix)
8 * A C G T A C G T A G T C C G A T A G T C C T G A A C G T A C G T A G C T A C G T 1e-8-1.991e+0117.86%0.19%46.1bp (84.6bp)PB0139.1_Irf5_2/Jaspar(0.655)
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motif file (matrix)
9 * G C A T T C A G C G T A G A C T G C A T C A G T G C A T G A T C G C T A A T C G 1e-7-1.811e+0114.29%0.09%67.8bp (71.2bp)PBX2/MA1113.1/Jaspar(0.690)
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motif file (matrix)
10 * A C T G A T C G A C G T C T A G C T G A A T G C C G T A C A T G A C G T A G T C A C G T A T G C 1e-6-1.478e+0121.43%1.04%45.7bp (68.8bp)SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar(0.654)
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motif file (matrix)
11 * C G A T C T A G G A T C C G T A A G T C C G T A A T C G A G C T A C G T G T A C 1e-5-1.375e+0125.00%2.01%58.2bp (72.0bp)PB0104.1_Zscan4_1/Jaspar(0.640)
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motif file (matrix)
12 * A C G T C G T A A C G T A G T C A C T G C G T A A C G T C G T A A C G T C G T A 1e-5-1.279e+0110.71%0.10%57.2bp (52.4bp)PB0198.1_Zfp128_2/Jaspar(0.728)
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motif file (matrix)
13 * C G T A A C G T C G T A A T C G C T G A A G C T C G T A A T C G C T G A A G C T 1e-3-9.157e+0014.29%0.88%28.3bp (84.7bp)MEF2D/MA0773.1/Jaspar(0.664)
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motif file (matrix)
14 * G T A C A C G T A G C T A G T C A G T C C G A T A T G C C A G T A C G T A T G C 1e-2-6.833e+0021.43%4.32%28.3bp (112.3bp)Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer(0.821)
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motif file (matrix)