Homer de novo Motif Results (T2V_up_motif/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 11096
Total background sequences = 38050
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 C A G T T C G A G A C T C A T G G C T A A T G C C G A T G T A C C T G A A G C T 1e-2514-5.790e+0344.72%7.36%51.6bp (68.8bp)BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer(0.994)
More Information | Similar Motifs Found
motif file (matrix)
2 C A G T A C T G C T A G C T G A C G T A G C T A C T G A G C A T G A C T G A C T 1e-463-1.068e+0332.74%15.17%53.9bp (64.2bp)NFATC1/MA0624.1/Jaspar(0.948)
More Information | Similar Motifs Found
motif file (matrix)
3 T G A C G C A T A T C G G C A T A C T G A C T G A G C T G C A T C G A T C A T G 1e-347-7.997e+0226.05%12.12%52.8bp (65.9bp)RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer(0.971)
More Information | Similar Motifs Found
motif file (matrix)
4 G A C T A C T G C G T A A T G C T A C G C G A T T G A C C G T A A G C T A G T C 1e-290-6.690e+0214.53%5.24%53.5bp (66.3bp)Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer(0.934)
More Information | Similar Motifs Found
motif file (matrix)
5 A T G C A G T C G T C A T C A G G T C A G T A C C T G A A C T G 1e-243-5.600e+0222.21%11.11%54.3bp (65.6bp)Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer(0.945)
More Information | Similar Motifs Found
motif file (matrix)
6 T C A G C T A G C G T A T G C A G T C A A G C T C T G A C G A T A C G T C G A T 1e-111-2.560e+0217.36%10.32%55.3bp (62.9bp)Arid5a/MA0602.1/Jaspar(0.740)
More Information | Similar Motifs Found
motif file (matrix)
7 T A C G T A G C T G A C C G T A T C A G T A G C A C G T A C T G A G C T C A G T 1e-110-2.547e+0213.75%7.55%54.9bp (65.4bp)Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer(0.977)
More Information | Similar Motifs Found
motif file (matrix)
8 C A T G T G A C A T G C T G C A C T G A T C A G G A T C A G T C 1e-73-1.699e+0237.88%29.78%56.1bp (64.2bp)NFIC/MA0161.2/Jaspar(0.823)
More Information | Similar Motifs Found
motif file (matrix)
9 T C A G T A G C C G A T A T C G C G A T T A C G G A C T T G C A C T G A G C T A G A T C T G C A 1e-66-1.542e+024.23%1.70%53.7bp (65.5bp)Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer(0.900)
More Information | Similar Motifs Found
motif file (matrix)
10 A C T G A G T C A G C T C T G A A T C G A G C T T C G A C T A G A G T C G A C T 1e-59-1.380e+0210.22%6.15%57.2bp (65.5bp)PB0155.1_Osr2_2/Jaspar(0.622)
More Information | Similar Motifs Found
motif file (matrix)
11 C G A T C A T G A G T C G A T C G T C A C T G A C T A G C T G A T G C A T G C A C T G A T G C A 1e-51-1.195e+023.49%1.45%54.8bp (63.9bp)NFIC/MA0161.2/Jaspar(0.794)
More Information | Similar Motifs Found
motif file (matrix)
12 A C T G A G C T A C G T C G T A A C G T C G A T A G C T A G C T 1e-46-1.069e+025.74%3.10%55.7bp (59.9bp)Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer(0.809)
More Information | Similar Motifs Found
motif file (matrix)
13 T A C G T C G A C A G T A T C G G T C A T G A C A C G T T C G A A C T G A C G T A T G C G T C A 1e-31-7.195e+010.96%0.24%47.5bp (68.0bp)MAFG::NFE2L1/MA0089.1/Jaspar(0.702)
More Information | Similar Motifs Found
motif file (matrix)
14 C G T A T A C G A G T C G C A T T C G A T G C A T A G C G T A C G T A C G T C A A G C T C G T A 1e-25-5.886e+010.16%0.00%51.7bp (43.6bp)CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer(0.622)
More Information | Similar Motifs Found
motif file (matrix)
15 A C G T A C T G C G T A A C T G A G T C C G T A C G T A A C G T C G T A A G T C 1e-13-3.190e+010.22%0.03%39.3bp (33.4bp)CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer(0.677)
More Information | Similar Motifs Found
motif file (matrix)
16 * G T A C C T G A T C A G C G T A A G T C G C A T T G A C G C T A G T C A G C T A G T A C G A T C 1e-11-2.699e+010.11%0.01%55.2bp (5.4bp)Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer(0.688)
More Information | Similar Motifs Found
motif file (matrix)
17 * A G T C A G T C A C G T A G T C C G T A A C G T C G T A A C G T A C T G A G T C 1e-4-1.071e+010.08%0.01%54.5bp (25.9bp)Bhlha15/MA0607.1/Jaspar(0.689)
More Information | Similar Motifs Found
motif file (matrix)