Homer de novo Motif Results (homer_peaks/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
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More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 3565
Total background sequences = 37091
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 G A C T T A G C A G T C C G T A G A C T A G C T A T G C G A T C C G T A G A C T G A C T A T G C 1e-569-1.312e+038.50%0.05%49.3bp (71.6bp)TEAD1(TEAD)/HepG2-TEAD1-ChIP-Seq(Encode)/Homer(0.698)
More Information | Similar Motifs Found
motif file (matrix)
2 A C T G C G T A A C G T C T A G T C G A A C G T A C G T A T G C G A T C C G T A A G C T A C G T 1e-146-3.372e+022.52%0.02%55.0bp (15.2bp)DUX4/MA0468.1/Jaspar(0.733)
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motif file (matrix)
3 C T G A G T C A C G T A A C G T C G A T A T G C A G C T G A C T 1e-145-3.351e+0218.76%6.11%54.2bp (71.6bp)TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer(0.843)
More Information | Similar Motifs Found
motif file (matrix)
4 C T G A A C G T A G T C C G T A C G T A A G T C G A T C G T A C T A C G C G T A A C T G C G A T 1e-94-2.184e+021.18%0.00%57.1bp (0.0bp)PH0016.1_Cux1_1/Jaspar(0.566)
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motif file (matrix)
5 A C G T C T A G A C G T C T A G C A G T C A T G C A T G C A G T T C A G A C G T T C A G C A G T 1e-80-1.845e+023.93%0.45%54.5bp (136.7bp)KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer(0.596)
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motif file (matrix)
6 T A G C A G T C T C G A C G A T A G C T T G A C C T A G C G T A A C G T C T A G C G T A A C G T 1e-78-1.796e+021.29%0.01%48.9bp (0.0bp)ZNF410/MA0752.1/Jaspar(0.617)
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motif file (matrix)
7 C G A T G A C T G A T C A T G C A T C G A C G T C G A T G A T C C T A G T C G A 1e-61-1.426e+021.01%0.01%59.9bp (52.4bp)MF0001.1_ETS_class/Jaspar(0.735)
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motif file (matrix)
8 A G T C A T G C A C G T C T G A T G C A A G T C A G T C A G T C A G C T C G T A G T C A A G T C 1e-57-1.328e+020.95%0.01%51.2bp (47.0bp)CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer(0.587)
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motif file (matrix)
9 C T G A A T C G T G A C G A T C G A C T G T C A T C G A T C A G A T C G A T G C 1e-50-1.161e+0213.01%6.14%52.6bp (62.7bp)AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer(0.934)
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motif file (matrix)
10 T G C A A G T C C T G A G A T C G T A C G A C T T G C A A G C T G T C A A G T C 1e-44-1.036e+027.43%2.76%58.0bp (100.7bp)PB0198.1_Zfp128_2/Jaspar(0.627)
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motif file (matrix)
11 A G T C A C T G T C G A C A T G G A C T T G A C T A C G T G C A 1e-39-9.089e+013.37%0.75%60.2bp (70.6bp)PB0203.1_Zfp691_2/Jaspar(0.653)
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motif file (matrix)
12 C T A G A T G C G A T C G T A C G T A C T C A G A G T C G T A C G A T C G A C T 1e-39-9.026e+015.33%1.74%54.3bp (55.8bp)Sp2(Zf)/HEK293-Sp2.eGFP-ChIP-Seq(Encode)/Homer(0.918)
More Information | Similar Motifs Found
motif file (matrix)
13 A G T C A G T C C G T A C T A G A C G T C T G A A C G T A C T G C T G A C G T A A C G T A C G T 1e-25-5.876e+010.53%0.01%55.7bp (32.8bp)PB0171.1_Sox18_2/Jaspar(0.600)
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motif file (matrix)
14 A T G C A C T G A C G T G A C T T C A G C T A G G T C A C G T A G C T A G A T C 1e-23-5.480e+010.50%0.01%53.6bp (25.5bp)PB0160.1_Rfxdc2_2/Jaspar(0.643)
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motif file (matrix)
15 A G C T C T G A A G C T C G T A A G T C C T G A A G T C C T G A 1e-16-3.856e+013.79%1.67%55.1bp (106.4bp)Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer(0.750)
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motif file (matrix)
16 A C G T G T C A C G A T C G T A A C G T A C T G A G T C A C T G 1e-16-3.811e+011.26%0.26%56.3bp (65.8bp)PB0163.1_Six6_2/Jaspar(0.704)
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motif file (matrix)
17 T A G C A C G T C T G A A C G T T C A G G T A C A C G T T C G A 1e-15-3.528e+0135.81%29.55%54.9bp (69.3bp)GATA1/MA0035.4/Jaspar(0.647)
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motif file (matrix)
18 G A C T C G T A A G C T C G A T C G A T C A G T C T G A A C G T C T A G C A G T G T C A A G T C 1e-12-2.979e+010.22%0.00%54.1bp (31.9bp)PB0015.1_Foxa2_1/Jaspar(0.652)
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motif file (matrix)
19 * A C T G A C G T C G T A A G T C A C G T A C G T A C G T A C T G C G T A A C G T 1e-6-1.586e+010.22%0.02%57.3bp (46.7bp)TCF7/MA0769.2/Jaspar(0.803)
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motif file (matrix)
20 * A G T C A G T C A G T C A G T C A G T C A G T C A G T C A G T C A G T C A G T C A G T C A G T C 1e-2-5.511e+000.22%0.07%55.1bp (62.6bp)PB0097.1_Zfp281_1/Jaspar(0.916)
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motif file (matrix)
21 * T A G C A G C T A T G C A C G T A T G C A C G T T G A C A C G T T A G C G A C T T A G C A C G T 1e0-1.569e+000.45%0.36%46.3bp (66.4bp)PRDM1/MA0508.3/Jaspar(0.646)
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motif file (matrix)