Homer de novo Motif Results (motif/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 72132
Total background sequences = 71643
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 T C G A A C G T C A T G C G T A T A G C C G A T G T A C T C G A A C G T G T A C 1e-3627-8.353e+0317.03%4.31%53.2bp (59.8bp)BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer(0.997)
More Information | Similar Motifs Found		motif file (matrix)
2 C T A G G T A C G A T C G T C A A G C T A T G C G A C T C T G A T A C G G C A T C T A G C A T G 1e-1650-3.800e+034.12%0.48%49.7bp (58.4bp)CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer(0.920)
More Information | Similar Motifs Found		motif file (matrix)
3 C A G T G A C T C G A T C A T G A T G C A G T C C G T A C T A G 1e-939-2.164e+0347.39%35.46%55.5bp (61.4bp)NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer(0.905)
More Information | Similar Motifs Found		motif file (matrix)
4 T C A G A G C T C A G T C A G T C A G T A G C T A G C T A G C T A C G T A C T G A T C G G T A C 1e-545-1.255e+038.31%4.12%54.1bp (59.0bp)NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer(0.891)
More Information | Similar Motifs Found		motif file (matrix)
5 C T A G T C G A C G A T C T A G C G A T A G C T A G C T G A T C G T A C G T A C 1e-443-1.021e+0316.99%11.33%56.3bp (60.5bp)FOXP3/MA0850.1/Jaspar(0.789)
More Information | Similar Motifs Found		motif file (matrix)
6 G A T C A C T G A C T G G C T A G C T A T G C A A G C T C T A G 1e-398-9.183e+0228.61%21.81%56.1bp (60.8bp)Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer(0.840)
More Information | Similar Motifs Found		motif file (matrix)
7 G C A T A C T G C T G A A G T C T C A G G A C T G T A C C G T A A G C T G A C T 1e-374-8.613e+027.85%4.36%54.8bp (58.0bp)Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer(0.938)
More Information | Similar Motifs Found		motif file (matrix)
8 A G T C G C A T A T C G G A C T A C T G C A T G A G C T A G C T C G A T T C G A 1e-342-7.895e+0211.08%7.01%55.4bp (59.3bp)RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer(0.981)
More Information | Similar Motifs Found		motif file (matrix)
9 T C G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G G A C T A G C T 1e-265-6.115e+0210.04%6.59%55.7bp (61.5bp)Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer(0.943)
More Information | Similar Motifs Found		motif file (matrix)
10 G T C A T C A G T A C G C T A G T G A C G C A T A T C G A G C T 1e-235-5.429e+0238.22%32.42%56.5bp (60.9bp)POL009.1_DCE_S_II/Jaspar(0.690)
More Information | Similar Motifs Found		motif file (matrix)
11 C G T A A C G T A C G T A G T C A G T C C G T A A C G T A C G T A G T C A T G C C G T A A C G T 1e-229-5.278e+020.37%0.02%56.6bp (75.3bp)PB0098.1_Zfp410_1/Jaspar(0.673)
More Information | Similar Motifs Found		motif file (matrix)
12 C T G A C T A G A C T G A C T G G A T C A C T G A C T G C T G A T C A G G A T C 1e-227-5.242e+0219.99%15.49%55.2bp (55.2bp)KLF5/MA0599.1/Jaspar(0.927)
More Information | Similar Motifs Found		motif file (matrix)
13 C A T G T A C G A G C T A C G T C T G A A C G T C T A G G T C A T G C A G C T A 1e-217-5.017e+0213.21%9.58%56.2bp (59.0bp)HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer(0.821)
More Information | Similar Motifs Found		motif file (matrix)
14 C A T G T A C G T A G C G C T A A C T G T A C G T G A C C G T A A T C G A T G C G T A C G C T A 1e-196-4.519e+0226.98%22.24%54.5bp (60.7bp)Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer(0.887)
More Information | Similar Motifs Found		motif file (matrix)
15 G A T C G C A T C A T G T A G C A G T C A T G C T C G A T A C G G C T A T C A G 1e-193-4.450e+0217.32%13.41%55.5bp (61.1bp)ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer(0.778)
More Information | Similar Motifs Found		motif file (matrix)
16 C T G A T A C G T A G C G T A C C G T A A T C G C G T A A C T G A G T C A G T C G T C A C T G A 1e-145-3.345e+029.73%7.14%54.7bp (59.5bp)NFIX/MA0671.1/Jaspar(0.709)
More Information | Similar Motifs Found		motif file (matrix)
17 A G T C A C G T G T C A C G A T A C T G C G T A A C T G A T C G 1e-138-3.179e+0215.98%12.76%56.9bp (60.4bp)PH0068.1_Hoxc13/Jaspar(0.642)
More Information | Similar Motifs Found		motif file (matrix)
18 C G T A A C T G A C T G A C G T A C T G A C T G A G T C A C T G A G T C A G C T 1e-98-2.279e+020.47%0.11%53.2bp (52.0bp)PB0117.1_Eomes_2/Jaspar(0.796)
More Information | Similar Motifs Found		motif file (matrix)
19 A C G T A G T C G T A C C G T A G T A C A C G T A G T C G T A C C G T A G T A C A C G T G A T C 1e-82-1.889e+020.15%0.01%59.3bp (41.2bp)Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer(0.685)
More Information | Similar Motifs Found		motif file (matrix)
20 A T G C G A C T C G T A G C A T C G A T G C A T G C T A G A C T C T G A C T A G T G A C G A T C 1e-79-1.841e+021.14%0.54%55.9bp (57.9bp)MEF2B/MA0660.1/Jaspar(0.934)
More Information | Similar Motifs Found		motif file (matrix)
21 A G T C A G C T A T G C A G T C A G T C A G C T A T G C A G T C A T G C A G C T A T G C A G C T 1e-72-1.678e+0222.75%20.01%55.0bp (55.4bp)PB0097.1_Zfp281_1/Jaspar(0.627)
More Information | Similar Motifs Found		motif file (matrix)
22 G T C A A G T C G T A C T A C G A G T C A C G T C G T A A C T G C T G A A G T C A G T C G T C A 1e-63-1.456e+020.10%0.01%49.5bp (40.0bp)Smad4/MA1153.1/Jaspar(0.635)
More Information | Similar Motifs Found		motif file (matrix)
23 A C T G C G T A A C G T A C G T A C G T C G T A A G C T A C T G 1e-52-1.216e+021.77%1.12%55.7bp (59.3bp)Hoxc9/MA0485.1/Jaspar(0.904)
More Information | Similar Motifs Found		motif file (matrix)
24 * C G T A A G T C A G T C C G T A A G T C A G T C C G T A A G T C A G T C C G T A A G T C A G T C 1e-1-3.720e+000.10%0.08%55.0bp (47.1bp)ZBTB7C/MA0695.1/Jaspar(0.666)
More Information | Similar Motifs Found		motif file (matrix)