Homer de novo Motif Results (N2_con_open_motif/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
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More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 986
Total background sequences = 48219
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 C A T G A G T C A G T C G T A C A G C T A G T C A C G T C T G A T C A G C G A T A C T G A C T G 1e-20-4.664e+013.96%0.55%49.1bp (58.4bp)CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer(0.899)
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motif file (matrix)
2 A C T G A C T G C T G A C G T A C G A T A C T G A G C T C A G T A G T C G A C T 1e-18-4.181e+016.90%1.92%60.9bp (63.1bp)TEAD3/MA0808.1/Jaspar(0.822)
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motif file (matrix)
3 T G A C A T C G C T G A A C T G A T G C G T A C T C G A C T G A 1e-16-3.879e+0122.41%12.62%57.1bp (62.9bp)NFIX/MA0671.1/Jaspar(0.812)
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motif file (matrix)
4 A G T C C G T A A C T G A G T C C G A T A C T G G A T C A G C T A C G T A T C G T A G C G C T A 1e-14-3.322e+0111.05%4.86%57.6bp (62.4bp)Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer(0.922)
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motif file (matrix)
5 T C A G T G C A C G T A C T A G C T A G C T G A C G T A A C G T C A G T A G C T A T G C G A C T 1e-12-2.905e+013.25%0.64%53.4bp (64.5bp)ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer(0.758)
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motif file (matrix)
6 * A G T C C G A T A C T G C T A G C T A G G T A C G A C T C T G A C G T A C A G T A C G T A C G T 1e-11-2.709e+012.13%0.28%53.9bp (64.9bp)ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer(0.683)
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motif file (matrix)
7 * A G C T A C T G C T G A A G C T A C T G G A C T G T C A G T C A A C G T A C T G 1e-11-2.638e+011.83%0.20%48.8bp (57.2bp)Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer(0.845)
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motif file (matrix)
8 * G A C T G T A C C T A G A C G T C T A G C G T A A T G C A C G T A G T C G T C A 1e-11-2.555e+011.83%0.21%54.0bp (63.0bp)AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer(0.823)
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motif file (matrix)
9 * A G C T G T A C A C G T A G T C A C G T A C T G A C T G C G T A C G A T A C T G A G T C C G T A 1e-10-2.525e+010.81%0.02%37.3bp (26.8bp)PB0077.1_Spdef_1/Jaspar(0.626)
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motif file (matrix)
10 * G T A C G A T C A T C G T C A G C T G A C T G A C T A G C A G T T C G A A G T C 1e-10-2.488e+0117.44%10.41%55.2bp (59.8bp)GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer(0.867)
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motif file (matrix)
11 * G A T C A G T C G T C A A C T G G T C A A G C T T A C G A C G T C A G T G C T A A G C T G T A C 1e-10-2.485e+012.23%0.35%49.4bp (52.9bp)ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer(0.884)
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motif file (matrix)
12 * T G C A C G T A T A C G G T A C A G C T A C G T A G C T A T G C G A T C G T C A T A G C C G A T 1e-10-2.467e+012.84%0.59%55.0bp (62.9bp)NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer(0.694)
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motif file (matrix)
13 * C G T A A C T G A T G C A C G T A C G T C G T A C G T A G T A C A C G T A C G T G T C A C G A T 1e-10-2.426e+010.51%0.00%33.5bp (0.0bp)PH0167.1_Tcf1/Jaspar(0.670)
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motif file (matrix)
14 * G T A C C G A T A C T G T G A C G A C T C G A T A C T G T G C A C T G A C T G A 1e-10-2.343e+019.13%4.34%52.2bp (63.3bp)STAT3/MA0144.2/Jaspar(0.687)
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motif file (matrix)
15 * A T G C C G A T A C T G A T G C G T A C T G C A C T G A A T C G G C T A C T A G T A C G G T A C 1e-9-2.256e+0112.17%6.62%51.7bp (61.7bp)AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer(0.722)
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motif file (matrix)
16 * A T G C A C T G T G A C A G T C G C A T C G T A T G C A G A C T 1e-9-2.097e+014.06%1.31%58.2bp (57.3bp)BARX1/MA0875.1/Jaspar(0.674)
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motif file (matrix)
17 * C T G A C A T G A C G T A G T C C G T A G T C A C T A G A C T G T A C G T C G A 1e-8-2.066e+014.97%1.85%56.8bp (59.8bp)Pax2/MA0067.1/Jaspar(0.686)
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motif file (matrix)
18 * A G T C A G T C C G T A A G T C A T C G G T C A G T A C A C T G A G C T A C T G C T G A T C G A 1e-8-2.035e+010.81%0.03%60.4bp (48.8bp)ZNF354C/MA0130.1/Jaspar(0.620)
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motif file (matrix)
19 * A C G T G A T C G T C A G T A C G A T C A G T C G C T A A T C G T G A C G T A C 1e-8-2.016e+014.97%1.87%59.4bp (59.6bp)PB0167.1_Sox13_2/Jaspar(0.624)
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motif file (matrix)
20 * G A C T C G T A A C T G A C T G G A T C A C G T A C T G A G T C A T G C C T A G 1e-8-1.921e+012.13%0.43%50.2bp (64.8bp)Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer(0.646)
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motif file (matrix)
21 * A C G T A C T G A G T C A G T C C T G A C G T A G T C A G T C A 1e-8-1.850e+017.20%3.44%56.8bp (63.3bp)NFIA/MA0670.1/Jaspar(0.858)
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motif file (matrix)
22 * G T C A C T G A G C T A T G A C C T G A A G C T G C T A G A C T A C G T A G C T 1e-6-1.603e+0121.81%15.50%58.6bp (65.5bp)BHLHE23/MA0817.1/Jaspar(0.722)
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motif file (matrix)
23 * A C T G C G T A C G T A C G T A C G T A A G T C A C G T A C T G C G T A C G T A C G T A C G T A 1e-6-1.600e+010.41%0.00%63.8bp (30.2bp)IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer(0.711)
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motif file (matrix)
24 * A C T G A C T G A T C G A C G T A T C G A C G T A T C G A C G T 1e-6-1.472e+0114.50%9.54%56.9bp (49.8bp)KLF4/MA0039.3/Jaspar(0.850)
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motif file (matrix)
25 * C T G A G T A C A G C T A G T C A C G T A G T C G C A T G T A C G C A T A T G C 1e-6-1.425e+016.19%3.13%54.2bp (59.8bp)PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer(0.721)
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motif file (matrix)
26 * C G T A T A G C G A T C T A C G A T G C A C G T T A G C T C A G A T G C C A G T 1e-5-1.348e+014.97%2.35%54.2bp (62.1bp)PB0076.1_Sp4_1/Jaspar(0.601)
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motif file (matrix)
27 * A G T C G A T C T G C A C A G T C A T G C T A G G A T C C T A G G T C A A T G C 1e-5-1.303e+016.39%3.40%58.2bp (58.1bp)Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer(0.842)
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motif file (matrix)
28 * T C A G A T G C A C G T C G A T C T A G T G A C A C T G G C A T 1e-5-1.198e+013.25%1.33%56.0bp (62.1bp)GMEB2/MA0862.1/Jaspar(0.707)
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motif file (matrix)
29 * C A T G C A T G T G C A T G C A G C T A T C G A T G C A G T C A G C T A G C T A T G C A C G T A 1e-4-1.105e+017.91%4.80%61.4bp (80.4bp)PB0182.1_Srf_2/Jaspar(0.844)
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motif file (matrix)
30 * A C G T A C T G C G T A A C T G C G T A C T A G C G T A A C G T A C G T A C G T A C G T A G T C 1e-4-1.081e+010.71%0.08%47.8bp (62.4bp)Gfi1/MA0038.1/Jaspar(0.710)
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motif file (matrix)
31 * A G T C T A G C C A G T A G T C A G T C G A T C C T G A A G T C A T G C G T A C G C T A T C A G 1e-4-1.047e+016.09%3.47%49.7bp (59.2bp)WT1(Zf)/Kidney-WT1-ChIP-Seq(GSE90016)/Homer(0.786)
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motif file (matrix)
32 * A C G T A C T G A G T C C T G A A C G T A C T G G T A C A C T G A C G T A C T G A G T C A T G C 1e-3-8.900e+000.61%0.08%44.7bp (65.9bp)PB0130.1_Gm397_2/Jaspar(0.655)
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motif file (matrix)
33 * A G T C C A G T A T G C T C A G A T G C A G C T A T G C A G T C T A C G T A C G C G T A A G T C 1e-2-5.378e+004.16%2.68%45.7bp (61.8bp)HINFP(Zf)/K562-HINFP.eGFP-ChIP-Seq(Encode)/Homer(0.625)
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motif file (matrix)