| Rank | Motif | P-value | log P-pvalue | % of Targets | % of Background | STD(Bg STD) | Best Match/Details | Motif File |
| 1 | 1e-125 | -2.884e+02 | 8.03% | 0.60% | 47.4bp (59.8bp) | BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer(0.903) More Information | Similar Motifs Found | motif file (matrix) | |
| 2 | 1e-71 | -1.646e+02 | 23.17% | 9.71% | 51.4bp (61.8bp) | RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer(0.927) More Information | Similar Motifs Found | motif file (matrix) | |
| 3 | 1e-62 | -1.434e+02 | 29.57% | 15.08% | 51.2bp (68.2bp) | Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer(0.970) More Information | Similar Motifs Found | motif file (matrix) | |
| 4 | 1e-36 | -8.438e+01 | 33.12% | 21.07% | 56.1bp (62.5bp) | TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer(0.953) More Information | Similar Motifs Found | motif file (matrix) | |
| 5 | 1e-26 | -6.050e+01 | 29.42% | 19.59% | 54.8bp (66.5bp) | NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer(0.958) More Information | Similar Motifs Found | motif file (matrix) | |
| 6 | 1e-25 | -5.966e+01 | 8.70% | 3.60% | 51.8bp (62.7bp) | PH0022.1_Dlx3/Jaspar(0.864) More Information | Similar Motifs Found | motif file (matrix) | |
| 7 | 1e-20 | -4.817e+01 | 9.13% | 4.30% | 50.5bp (61.4bp) | AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer(0.967) More Information | Similar Motifs Found | motif file (matrix) | |
| 8 | 1e-17 | -4.090e+01 | 11.20% | 6.12% | 60.1bp (60.2bp) | JUN/MA0488.1/Jaspar(0.894) More Information | Similar Motifs Found | motif file (matrix) | |
| 9 | 1e-16 | -3.776e+01 | 3.41% | 1.05% | 54.1bp (63.6bp) | EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer(0.863) More Information | Similar Motifs Found | motif file (matrix) | |
| 10 | 1e-16 | -3.689e+01 | 2.93% | 0.82% | 54.9bp (63.3bp) | NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer(0.789) More Information | Similar Motifs Found | motif file (matrix) | |
| 11 | 1e-15 | -3.660e+01 | 32.50% | 24.50% | 57.0bp (66.3bp) | POL010.1_DCE_S_III/Jaspar(0.716) More Information | Similar Motifs Found | motif file (matrix) | |
| 12 | 1e-15 | -3.534e+01 | 30.29% | 22.63% | 55.9bp (62.6bp) | MF0010.1_Homeobox_class/Jaspar(0.707) More Information | Similar Motifs Found | motif file (matrix) | |
| 13 | 1e-14 | -3.337e+01 | 27.55% | 20.38% | 55.4bp (63.4bp) | NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer(0.874) More Information | Similar Motifs Found | motif file (matrix) | |
| 14 | 1e-13 | -3.192e+01 | 1.44% | 0.24% | 45.0bp (55.8bp) | ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer(0.888) More Information | Similar Motifs Found | motif file (matrix) | |
| 15 | 1e-13 | -3.037e+01 | 0.34% | 0.00% | 34.1bp (41.3bp) | PB0154.1_Osr1_2/Jaspar(0.579) More Information | Similar Motifs Found | motif file (matrix) | |
| 16 | 1e-12 | -2.819e+01 | 1.59% | 0.33% | 57.1bp (60.1bp) | RELA/MA0107.1/Jaspar(0.613) More Information | Similar Motifs Found | motif file (matrix) | |
| 17 * | 1e-11 | -2.757e+01 | 1.30% | 0.23% | 56.6bp (66.1bp) | Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer(0.609) More Information | Similar Motifs Found | motif file (matrix) | |
| 18 * | 1e-11 | -2.582e+01 | 6.35% | 3.34% | 52.6bp (60.8bp) | ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer(0.616) More Information | Similar Motifs Found | motif file (matrix) | |
| 19 * | 1e-10 | -2.453e+01 | 4.76% | 2.28% | 56.0bp (64.6bp) | Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer(0.823) More Information | Similar Motifs Found | motif file (matrix) | |
| 20 * | 1e-10 | -2.308e+01 | 1.39% | 0.32% | 39.4bp (62.6bp) | PB0054.1_Rfx3_1/Jaspar(0.640) More Information | Similar Motifs Found | motif file (matrix) | |
| 21 * | 1e-8 | -1.912e+01 | 1.35% | 0.36% | 49.7bp (64.2bp) | RUNX2/MA0511.2/Jaspar(0.660) More Information | Similar Motifs Found | motif file (matrix) | |
| 22 * | 1e-8 | -1.866e+01 | 2.02% | 0.73% | 52.9bp (63.8bp) | Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer(0.734) More Information | Similar Motifs Found | motif file (matrix) | |
| 23 * | 1e-8 | -1.855e+01 | 6.20% | 3.65% | 57.8bp (64.1bp) | PITX3/MA0714.1/Jaspar(0.704) More Information | Similar Motifs Found | motif file (matrix) | |
| 24 * | 1e-7 | -1.735e+01 | 1.83% | 0.65% | 53.7bp (60.6bp) | Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer(0.871) More Information | Similar Motifs Found | motif file (matrix) | |
| 25 * | 1e-5 | -1.293e+01 | 0.19% | 0.01% | 67.0bp (0.0bp) | Mafb/MA0117.2/Jaspar(0.690) More Information | Similar Motifs Found | motif file (matrix) | |
| 26 * | 1e-4 | -1.117e+01 | 0.14% | 0.00% | 43.3bp (15.2bp) | EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer(0.706) More Information | Similar Motifs Found | motif file (matrix) | |
| 27 * | 1e-4 | -9.215e+00 | 0.24% | 0.02% | 57.7bp (84.7bp) | INSM1/MA0155.1/Jaspar(0.656) More Information | Similar Motifs Found | motif file (matrix) | |
| 28 * | 1e-3 | -7.035e+00 | 6.01% | 4.50% | 54.6bp (57.6bp) | ZNF740/MA0753.1/Jaspar(0.856) More Information | Similar Motifs Found | motif file (matrix) | |
| 29 * | 1e-2 | -5.593e+00 | 0.10% | 0.01% | 19.5bp (45.1bp) | Sp1(Zf)/Promoter/Homer(0.661) More Information | Similar Motifs Found | motif file (matrix) |