Homer de novo Motif Results (test2//)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
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More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 64563
Total background sequences = 270416
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G T A 1e-7273-1.675e+0458.12%20.53%166.8bp (233.5bp)FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer(0.977)
More Information | Similar Motifs Found
motif file (matrix)
2 A G T C C G A T A T C G G A C T C A G T A C G T A C G T A G T C G A T C G T A C C G T A A T C G 1e-5933-1.366e+0462.21%27.08%190.4bp (243.2bp)ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer(0.712)
More Information | Similar Motifs Found
motif file (matrix)
3 T A G C T A G C C G T A A C T G A T C G G T A C C G T A A T C G 1e-5188-1.195e+0453.53%21.83%189.6bp (244.5bp)HIC1(Zf)/Treg-ZBTB29-ChIP-Seq(GSE99889)/Homer(0.749)
More Information | Similar Motifs Found
motif file (matrix)
4 C G T A C A T G T C A G T A G C G C T A T A G C G C T A T A G C C G A T A T C G G A C T C A T G 1e-4754-1.095e+0468.58%36.50%186.3bp (240.0bp)AZF1(C2H2)/colamp-AZF1-DAP-Seq(GSE60143)/Homer(0.646)
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motif file (matrix)
5 C G T A C T A G T C A G T G C A T G C A C G T A A C T G T A C G C G T A C T A G 1e-4607-1.061e+0469.06%37.48%203.2bp (272.1bp)PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer(0.661)
More Information | Similar Motifs Found
motif file (matrix)
6 T A C G C T G A T A C G C T G A T A C G C T G A T A C G C T G A T A C G C T G A T C A G T C G A 1e-4237-9.758e+0361.04%31.04%192.5bp (292.8bp)SeqBias: GA-repeat(0.896)
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motif file (matrix)
7 T A C G C G T A C T A G T A C G C G T A C T A G A C T G C T A G C T G A C T G A T C G A C T G A 1e-3748-8.630e+0368.92%40.40%196.0bp (294.2bp)PF10_0068(RRM)/Plasmodium_falciparum-RNCMPT00199-PBM/HughesRNA(0.749)
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motif file (matrix)
8 G A T C G A T C G C A T C A T G C T A G T G C A T G C A G T C A 1e-3702-8.525e+0375.05%47.11%189.7bp (235.1bp)NFATC2/MA0152.1/Jaspar(0.788)
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motif file (matrix)
9 T G A C C G T A T A C G T G A C C G T A A T C G T A G C G C T A C T A G T A C G 1e-3278-7.549e+0349.46%24.18%191.0bp (237.9bp)SeqBias: GCW-triplet(0.798)
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motif file (matrix)
10 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T 1e-2998-6.904e+0317.35%3.42%195.9bp (242.0bp)SeqBias: polyA-repeat(0.827)
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motif file (matrix)
11 C G T A A G T C C G T A G C A T C G A T C G T A C G A T A T C G A C G T G C A T G A T C G A C T 1e-2939-6.768e+0335.65%14.55%164.8bp (239.1bp)PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer(0.899)
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motif file (matrix)
12 C G A T C T A G C T A G T C A G T A G C C G T A T G C A C G T A C A G T C T A G 1e-2909-6.699e+0362.61%37.46%189.2bp (245.6bp)MXI1/MA1108.2/Jaspar(0.734)
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motif file (matrix)
13 G T A C G C T A T A G C G T C A T G A C G T C A T A G C G T A C C G A T A C T G 1e-2669-6.148e+0354.73%31.05%190.7bp (240.2bp)Ptf1a(var.3)/MA1620.1/Jaspar(0.745)
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motif file (matrix)
14 G A T C C G A T A C T G C A T G A T C G C G A T A T C G G T A C G T A C C G T A 1e-2624-6.044e+0349.83%26.88%189.5bp (241.6bp)ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer(0.690)
More Information | Similar Motifs Found
motif file (matrix)
15 T C A G A C G T A C T G T C G A A T G C G C T A A T C G C G T A 1e-1945-4.479e+0360.95%40.33%193.1bp (249.4bp)FOSL1::JUND/MA1142.1/Jaspar(0.835)
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motif file (matrix)
16 G C T A C T G A C T A G A C T G T G C A C T G A T A G C C G A T 1e-1907-4.392e+0366.80%46.46%191.2bp (247.2bp)RBM5(Znf)/Homo_sapiens-RNCMPT00055-PBM/HughesRNA(0.825)
More Information | Similar Motifs Found
motif file (matrix)
17 A G T C G C A T A T C G C G T A T A C G A T G C G A C T A T C G 1e-1808-4.165e+0323.12%9.20%203.8bp (247.0bp)PL0013.1_hlh-2::hlh-15/Jaspar(0.696)
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motif file (matrix)
18 C G A T A C T G A G C T G C T A G T A C C G T A C G A T C A G T 1e-1658-3.819e+0350.85%32.21%190.7bp (239.9bp)SPL9(SBP)/colamp-SPL9-DAP-Seq(GSE60143)/Homer(0.765)
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motif file (matrix)
19 G T A C G C A T A G C T A C G T A C G T C G A T C G T A C G T A C G T A C T G A 1e-1137-2.620e+0314.55%5.59%206.3bp (229.7bp)Unknown6/Drosophila-Promoters/Homer(0.891)
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motif file (matrix)
20 A G T C A G T C G T C A A C T G A T G C A G T C A G T C A G T C 1e-1121-2.583e+0317.88%7.86%194.8bp (264.5bp)KLF15/MA1513.1/Jaspar(0.857)
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motif file (matrix)
21 A C T G A C G T A C T G A G T C C G T A C T A G A C G T A C T G A C T G A G T C 1e-717-1.652e+032.36%0.14%230.1bp (218.9bp)PB0091.1_Zbtb3_1/Jaspar(0.830)
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motif file (matrix)
22 T G C A A G C T A G C T A G T C C G T A A G C T A G C T A G T C G T C A A G C T A G C T G A T C 1e-636-1.464e+037.69%2.78%196.8bp (238.2bp)ZNF24/MA1124.1/Jaspar(0.934)
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motif file (matrix)
23 A G T C G A T C C G A T C G A T A C T G T C A G C T G A A C T G 1e-628-1.447e+0315.84%8.44%195.9bp (237.1bp)Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer(0.687)
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motif file (matrix)
24 A C T G A C T G A G T C A G T C A C G T A G T C A G T C A G T C C G T A C G T A 1e-442-1.020e+031.26%0.04%230.1bp (250.8bp)HNRNPH2(RRM)/Homo_sapiens-RNCMPT00160-PBM/HughesRNA(0.714)
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motif file (matrix)
25 C G T A A C G T A C G T C G T A A G T C C G T A A C T G A C T G 1e-369-8.511e+024.16%1.42%219.4bp (232.3bp)MATALPHA2/MA0328.2/Jaspar(0.804)
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motif file (matrix)
26 T C A G A C G T C T G A A C T G C G T A C T A G C G T A G A C T C T A G C T A G C T A G C T A G 1e-232-5.345e+020.84%0.07%241.3bp (264.9bp)Unknown2/Drosophila-Promoters/Homer(0.687)
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motif file (matrix)
27 A G T C C G T A C T A G A G T C C G T A C G T A C G T A A C G T C G T A A C G T A C G T C T A G 1e-148-3.420e+020.58%0.06%156.1bp (150.4bp)Arid5a/MA0602.1/Jaspar(0.721)
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motif file (matrix)
28 A C G T C G T A A C G T C G T A A C G T C G T A A C G T C G T A A C G T C G T A A C G T C G T A 1e-99-2.293e+020.32%0.02%236.7bp (144.7bp)SeqBias: TA-repeat(0.908)
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motif file (matrix)
29 C T G A C A G T G C A T A T G C T A G C C T G A A G C T A C G T A G T C C T A G T C G A A C G T 1e-82-1.901e+020.42%0.06%291.8bp (177.2bp)MOD(RRM)/Drosophila_melanogaster-RNCMPT00140-PBM/HughesRNA(0.732)
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motif file (matrix)
30 T A C G A T C G T A C G T A C G A T C G T A C G T A C G A T C G T A C G T A C G A T C G A T C G 1e-62-1.448e+022.67%1.64%171.3bp (235.0bp)SeqBias: CG bias(0.812)
More Information | Similar Motifs Found
motif file (matrix)