Homer de novo Motif Results (test6//)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
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More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 22476
Total background sequences = 26816
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 T C A G G A C T T C G A T G C A C G T A A G T C G C T A G C A T 1e-986-2.271e+0332.74%14.80%54.6bp (65.3bp)FOXI1/MA0042.2/Jaspar(0.949)
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motif file (matrix)
2 G C T A A G T C G C T A A C T G G C A T T G C A G C A T A T C G A C G T C G A T G T A C G A C T 1e-567-1.307e+0319.68%8.69%52.8bp (65.6bp)PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer(0.912)
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motif file (matrix)
3 A C G T A C G T A C G T G A C T T C G A A G C T C A G T C T A G A C T G T G C A C G T A A G T C 1e-244-5.639e+021.59%0.14%43.3bp (66.4bp)HOXB13/MA0901.2/Jaspar(0.844)
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motif file (matrix)
4 A G T C C G A T T A C G T A G C A T G C C G T A T C A G G T A C 1e-132-3.048e+0226.64%19.86%57.1bp (62.9bp)NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer(0.924)
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motif file (matrix)
5 A T G C G A T C G C A T G A C T G T A C G A T C G C A T C A T G C G A T C A T G C A G T C G A T 1e-125-2.888e+020.36%0.01%37.5bp (30.2bp)Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer(0.670)
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motif file (matrix)
6 A T C G C G T A C T G A G A C T C T A G T A C G C G T A C T G A G C A T A T C G A T C G C G T A 1e-111-2.559e+020.42%0.01%57.4bp (39.1bp)TEAD1(TEAD)/HepG2-TEAD1-ChIP-Seq(Encode)/Homer(0.699)
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motif file (matrix)
7 A C G T A C T G C G A T A G C T C T A G C G T A G A C T G C A T C G A T A C G T C T G A C T A G 1e-109-2.523e+020.42%0.01%41.3bp (46.2bp)NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer(0.683)
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motif file (matrix)
8 C A G T C G A T A G C T C G T A A C G T C G T A A C T G A G T C A G T C A C G T C T G A A C T G 1e-103-2.392e+021.25%0.24%49.4bp (72.6bp)CDX2/MA0465.2/Jaspar(0.655)
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motif file (matrix)
9 T A C G A G T C G T C A T G A C C G T A C A T G C T A G T A C G G T A C T G A C 1e-102-2.371e+0233.55%27.01%55.4bp (63.2bp)POL009.1_DCE_S_II/Jaspar(0.708)
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motif file (matrix)
10 A G T C C T G A A C G T G C T A A G T C T A C G C T A G A C T G 1e-84-1.935e+0216.90%12.42%56.4bp (62.9bp)TCF21(var.2)/MA1568.1/Jaspar(0.720)
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motif file (matrix)
11 A T C G C G T A A C T G A G C T A C G T T A C G C T G A C T A G A C G T T C G A T A C G G A C T 1e-83-1.923e+020.31%0.01%44.1bp (7.9bp)NKX2-2/MA1645.1/Jaspar(0.652)
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motif file (matrix)
12 A G T C A G C T A G T C C G A T C G A T A C G T A C T G A G T C C G T A A C T G A C G T C G A T 1e-76-1.752e+020.32%0.01%33.7bp (32.2bp)Tcf7(HMG)/GM12878-TCF7-ChIP-Seq(Encode)/Homer(0.630)
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motif file (matrix)
13 C G A T C G T A C T G A A C T G C G T A A C T G A C T G C G T A C G T A A C T G T C A G A G T C 1e-74-1.708e+020.34%0.02%33.3bp (39.4bp)IKZF1/MA1508.1/Jaspar(0.718)
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motif file (matrix)
14 T C A G T G A C A C G T A C G T G T A C A C G T G T A C A G C T C G T A A T C G C A G T C G A T 1e-72-1.680e+020.51%0.05%44.8bp (71.9bp)OSR2/MA1646.1/Jaspar(0.614)
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motif file (matrix)
15 C T G A A C G T G T A C C G A T C T A G A C G T A G C T A C G T A G T C A G T C A G C T A T G C 1e-72-1.666e+020.28%0.01%28.4bp (58.7bp)ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer(0.800)
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motif file (matrix)
16 A C T G G C T A A C G T G A T C G T C A A C T G C G A T A C T G T A G C C G T A A C T G C G T A 1e-67-1.551e+020.70%0.12%59.5bp (68.7bp)ZNF317/MA1593.1/Jaspar(0.620)
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motif file (matrix)
17 A G C T T G A C G A T C G A C T A T G C G C A T A C T G T A G C G T A C G A C T G C A T C G T A 1e-63-1.451e+020.25%0.01%53.1bp (31.9bp)ELF3/MA0640.2/Jaspar(0.654)
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motif file (matrix)
18 A G T C C G T A C G T A A C T G A G T C C G T A A C G T A C G T C G T A A C T G 1e-51-1.176e+020.21%0.01%70.8bp (24.4bp)Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer(0.702)
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motif file (matrix)
19 A C T G A T G C A T G C G A C T T C G A A T G C G T C A T C G A 1e-49-1.139e+025.00%3.13%51.6bp (65.1bp)Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer(0.668)
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motif file (matrix)
20 C G T A G T A C A C T G A C G T A C G T C T A G A G T C C A G T G T A C A T C G 1e-48-1.108e+020.25%0.02%52.4bp (77.0bp)RFX7/MA1554.1/Jaspar(0.658)
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motif file (matrix)
21 T C G A A T C G A G C T C A G T A G T C A G T C A C G T A C G T 1e-48-1.108e+0210.70%7.93%53.9bp (60.5bp)ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer(0.824)
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motif file (matrix)
22 C G T A A G T C A C G T A C T G C G T A A C G T A G T C C G T A A G T C A G T C 1e-32-7.571e+010.16%0.01%57.2bp (32.5bp)PH0016.1_Cux1_1/Jaspar(0.680)
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motif file (matrix)
23 A C T G C G T A A C G T A G T C A C G T C G T A C G T A C G T A 1e-24-5.567e+011.05%0.50%47.6bp (53.6bp)PB0194.1_Zbtb12_2/Jaspar(0.651)
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motif file (matrix)
24 A C G T A G T C A G T C A C G T A C G T A T G C C T A G A C T G 1e-23-5.434e+012.00%1.20%56.4bp (60.9bp)POL008.1_DCE_S_I/Jaspar(0.673)
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motif file (matrix)
25 C G T A A C G T A G T C A G C T A C T G A C T G A G T C A T G C 1e-22-5.247e+012.08%1.27%65.9bp (60.0bp)PB0193.1_Tcfe2a_2/Jaspar(0.746)
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motif file (matrix)
26 A G T C C G T A A C G T A C T G A G T C C G T A A G T C C G T A A G T C A C T G A G T C A C T G 1e-22-5.110e+010.21%0.04%51.5bp (76.6bp)PB0044.1_Mtf1_1/Jaspar(0.691)
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motif file (matrix)
27 A C T G A C G T A C T G A C G T A C T G A G C T A C T G A C T G A C G T A C T G G A C T A C T G 1e-19-4.509e+010.52%0.20%53.3bp (82.3bp)RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer(0.678)
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motif file (matrix)
28 A C T G A C T G A G T C A C G T A C G T A C T G A T C G A G T C A C G T A C T G A C T G A G T C 1e-14-3.353e+016.86%5.62%55.3bp (60.3bp)Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer(0.729)
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motif file (matrix)
29 A C T G A T C G T A G C A C T G A T C G A T G C A C T G A T G C A T G C A T C G 1e-14-3.348e+010.19%0.04%43.2bp (32.5bp)Sp1(Zf)/Promoter/Homer(0.684)
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motif file (matrix)
30 A G T C A C T G A G T C C T A G A G T C T C A G A G T C T C G A A G T C C T G A 1e-13-3.098e+010.77%0.41%53.2bp (71.7bp)TCFL5/MA0632.2/Jaspar(0.802)
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motif file (matrix)
31 * A T G C G A T C A G T C A T G C T A G C A T G C T A G C A G T C T A C G T G A C 1e-9-2.175e+011.21%0.82%52.2bp (46.4bp)Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer(0.849)
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motif file (matrix)