Homer de novo Motif Results (moffitt_R9bMS_motif/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
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More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 533
Total background sequences = 35500
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 C G A T A G T C T A G C C T G A A C G T C A G T T A G C T A G C C T G A A C G T C G A T A G T C 1e-191-4.420e+0218.20%0.08%56.6bp (116.2bp)TEAD3(TEA)/HepG2-TEAD3-ChIP-Seq(Encode)/Homer(0.658)
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motif file (matrix)
2 A G T C A G T C T C G A C G A T A G C T A G T C A C T G C G T A A C G T A C T G C G T A A G C T 1e-121-2.796e+0210.88%0.04%54.7bp (0.0bp)MAFG::NFE2L1/MA0089.1/Jaspar(0.645)
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motif file (matrix)
3 C T A G C G T A A C G T C A T G G T C A A G C T G A C T T A G C A G T C G T C A 1e-73-1.684e+0211.82%0.34%49.8bp (81.6bp)PH0037.1_Hdx/Jaspar(0.728)
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motif file (matrix)
4 C G T A A C G T A T G C C G T A G C T A A G T C A G T C T G A C A C T G C G T A C A T G A C G T 1e-58-1.343e+023.94%0.00%59.3bp (0.0bp)PH0016.1_Cux1_1/Jaspar(0.588)
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motif file (matrix)
5 A T G C A C T G A C G T A C G T A T C G A C T G C G T A C G T A C T G A A T G C A C T G A C T G 1e-58-1.343e+023.94%0.00%52.2bp (0.0bp)CENPB/MA0637.1/Jaspar(0.667)
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motif file (matrix)
6 C G T A C G T A A C T G G T A C C G T A A G C T A C G T A T G C A C G T A T G C C G T A A C T G 1e-55-1.270e+023.75%0.01%61.4bp (35.3bp)PB0138.1_Irf4_2/Jaspar(0.667)
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motif file (matrix)
7 A G T C C G T A C G T A A T G C A C G T A G T C T G C A A G T C C G T A A C T G C G T A A C T G 1e-54-1.266e+025.07%0.02%51.9bp (25.4bp)Gfi1/MA0038.1/Jaspar(0.588)
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motif file (matrix)
8 G T A C A C G T C T A G A G T C C G T A C T G A A C T G A C G T C T A G A T C G C G T A A G C T 1e-48-1.121e+024.32%0.02%40.4bp (47.1bp)PH0114.1_Nkx2-5/Jaspar(0.688)
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motif file (matrix)
9 G T C A C G T A A G T C A C G T C G A T T A G C A C G T A G C T A C G T A C T G A C G T A C T G 1e-43-9.964e+014.88%0.04%63.6bp (66.1bp)PB0166.1_Sox12_2/Jaspar(0.727)
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motif file (matrix)
10 A G T C C G T A A C T G A C G T A C G T G A C T A C G T C T A G C T G A C G T A C G T A G T A C 1e-40-9.264e+014.88%0.06%48.4bp (45.6bp)CHR(?)/Hela-CellCycle-Expression/Homer(0.741)
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motif file (matrix)
11 C T A G C G T A A T C G A G C T A C G T A C T G T G C A C T G A G A T C T A G C 1e-35-8.198e+016.00%0.20%59.4bp (61.7bp)VDR/MA0693.2/Jaspar(0.685)
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motif file (matrix)
12 A G T C A C G T G A C T A C G T A C G T T A C G C G T A C G A T C G T A A C T G C G T A A T C G 1e-29-6.731e+013.56%0.05%40.7bp (49.6bp)PBX1/MA0070.1/Jaspar(0.652)
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motif file (matrix)
13 A T G C A C G T A G T C C G T A A C T G C G T A C G T A C G T A A G T C A C G T 1e-28-6.533e+014.32%0.11%66.8bp (43.5bp)PH0068.1_Hoxc13/Jaspar(0.626)
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motif file (matrix)
14 A C T G A C T G A G T C A G T C A C G T A C G T A G T C A C T G A C G T A C G T 1e-27-6.400e+012.06%0.00%54.5bp (0.0bp)Sox2/MA0143.3/Jaspar(0.671)
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motif file (matrix)
15 A G T C A G T C A G T C A G T C C G A T C T A G A G C T C T G A C T A G A C T G A G T C C G T A 1e-24-5.737e+011.88%0.00%49.7bp (32.1bp)TFAP2B(var.3)/MA0813.1/Jaspar(0.676)
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motif file (matrix)
16 G T A C C G T A A C T G A C G T A C T G A G T C C G T A A C T G C G T A A T C G C G T A A C G T 1e-24-5.737e+011.88%0.00%54.5bp (0.0bp)Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer(0.667)
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motif file (matrix)
17 A G T C A G T C A G C T C T G A A C T G C G T A A T G C C G T A C G T A C T A G C G T A A C T G 1e-24-5.737e+011.88%0.00%49.6bp (20.7bp)Smad4/MA1153.1/Jaspar(0.684)
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motif file (matrix)
18 A G T C A C T G G T A C A G C T A C G T A C G T A T C G G T C A C T A G A C T G A G T C A G T C 1e-24-5.694e+012.81%0.03%54.2bp (53.6bp)Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer(0.644)
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motif file (matrix)
19 A C T G C G T A C G T A C G T A A G T C G T C A A G T C A G C T A G T C A C G T 1e-23-5.479e+013.75%0.11%46.8bp (69.0bp)Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer(0.644)
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motif file (matrix)
20 A C G T G T C A A C T G A C T G A C G T C T G A A G T C C T G A A C T G A C G T C T G A A C G T 1e-23-5.413e+012.25%0.01%48.9bp (25.3bp)AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer(0.605)
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motif file (matrix)
21 C T G A A C G T C G T A A C T G C G T A A C T G A G T C C T G A A C T G A C G T 1e-21-4.993e+013.00%0.06%39.4bp (80.5bp)ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer(0.669)
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motif file (matrix)
22 C G T A A C G T A G T C C G T A G A T C A G T C A G C T T C G A A C T G C A T G A C G T A C T G 1e-19-4.461e+011.69%0.01%51.1bp (34.4bp)T/MA0009.2/Jaspar(0.648)
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motif file (matrix)
23 C T A G A C G T C G T A T A G C A C G T A C G T A C G T A C T G C G T A A C G T C G T A A C G T 1e-19-4.440e+011.50%0.00%53.6bp (32.3bp)PB0084.1_Tcf7l2_1/Jaspar(0.733)
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motif file (matrix)
24 A C G T C G T A A C T G T C G A A G T C C G T A A C T G C G T A 1e-14-3.231e+017.13%1.52%60.3bp (62.5bp)Smad4/MA1153.1/Jaspar(0.663)
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motif file (matrix)
25 A T C G C G T A A T G C A G T C T G C A A C T G A G C T A C G T 1e-13-3.068e+015.63%0.98%44.5bp (71.5bp)GRHL2/MA1105.1/Jaspar(0.729)
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motif file (matrix)
26 A C T G C G A T A C T G C G T A A G T C C T G A A C G T C G T A A C G T A G T C 1e-13-3.047e+011.88%0.04%55.3bp (36.8bp)PB0126.1_Gata5_2/Jaspar(0.668)
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motif file (matrix)
27 * C G T A A G T C A C T G A C T G C G T A C G T A A G T C A C T G 1e-10-2.364e+011.13%0.01%58.5bp (21.5bp)Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer(0.664)
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motif file (matrix)
28 * A C G T C G T A A C G T C G T A A C G T A G C T A C G T A G T C A C G T A G T C C G T A G T C A 1e-5-1.235e+010.75%0.02%53.1bp (25.9bp)CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer(0.612)
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motif file (matrix)
29 * C G A T C G A T C G A T C G T A G C A T C G A T G C A T G C T A G C A T G C A T C G A T C G T A 1e-4-9.818e+005.07%2.16%50.9bp (90.5bp)FOXC2/MA0846.1/Jaspar(0.752)
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motif file (matrix)