Homer de novo Motif Results (moffitt_Untrt_motif/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
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More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 727
Total background sequences = 56000
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 A T C G C G T A C G A T A C G T A T G C T A C G C G T A C G A T A C G T A T G C T A C G C G T A 1e-213-4.920e+0210.59%0.01%56.4bp (51.0bp)Duxbl(Homeobox)/NIH3T3-Duxbl.HA-ChIP-Seq(GSE119782)/Homer(0.600)
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motif file (matrix)
2 G A T C A G T C G T C A A G C T A G C T G T A C A C T G C G T A A G C T A C T G 1e-106-2.450e+027.84%0.04%55.3bp (60.7bp)PB0040.1_Lef1_1/Jaspar(0.585)
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motif file (matrix)
3 C T A G C T G A A G C T C A T G G T C A A C G T G A C T T A G C A G T C C G T A 1e-61-1.410e+0210.18%0.65%58.7bp (73.1bp)PH0037.1_Hdx/Jaspar(0.723)
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motif file (matrix)
4 A C T G C G T A C G T A A C T G G T A C C G T A A C G T A G C T A G T C A C G T A T G C C T G A 1e-61-1.405e+024.54%0.03%51.0bp (36.9bp)POL008.1_DCE_S_I/Jaspar(0.629)
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motif file (matrix)
5 A C G T A C T G C G A T A C T G C G T A A C G T A C T G A C G T A C T G G A C T C T A G A G T C 1e-59-1.376e+024.68%0.04%49.1bp (61.1bp)PB0208.1_Zscan4_2/Jaspar(0.690)
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motif file (matrix)
6 G T C A A G T C C T G A A T C G C G T A A C T G A C G T A C G T A C T G C G T A C G T A G T A C 1e-53-1.223e+024.68%0.05%55.7bp (63.3bp)VDR/MA0693.2/Jaspar(0.568)
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motif file (matrix)
7 A C T G A C T G C G T A C G T A C G T A A C G T C G T A A C G T A G T C A C G T A C G T A G T C 1e-50-1.174e+023.99%0.03%48.1bp (85.5bp)ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer(0.685)
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motif file (matrix)
8 C G T A C G T A A G T C A C T G A C T G C T A G G T C A A C G T 1e-49-1.134e+026.46%0.24%59.6bp (73.8bp)SPDEF/MA0686.1/Jaspar(0.685)
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motif file (matrix)
9 A C G T A G T C A G T C A G T C A C G T A C G T A G T C A T G C G T C A A G C T A C G T A G T C 1e-47-1.097e+0215.13%2.66%57.2bp (77.4bp)ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer(0.661)
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motif file (matrix)
10 A C G T A G T C A C G T A C T G T G A C C G T A C T G A T A C G A C G T A C T G A C T G C G T A 1e-47-1.091e+023.99%0.04%59.6bp (69.0bp)NKX2-3/MA0672.1/Jaspar(0.659)
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motif file (matrix)
11 A C G T C G T A C G T A G T C A G T C A C G T A A G T C A G C T C G T A A T C G C G T A A G T C 1e-46-1.073e+023.58%0.03%53.1bp (42.4bp)Smad4/MA1153.1/Jaspar(0.673)
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motif file (matrix)
12 A C G T A G T C A C T G A C G T C G A T A C T G A C T G C G T A C G T A C T G A A G T C A C T G 1e-41-9.565e+012.20%0.00%62.0bp (4.0bp)CENPB/MA0637.1/Jaspar(0.642)
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motif file (matrix)
13 G T A C A C T G A G T C A C G T A C G T A C G T A C T G C T G A A C T G C T A G A G T C A G T C 1e-41-9.565e+012.20%0.00%42.9bp (2.3bp)Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer(0.627)
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motif file (matrix)
14 A G T C C T G A A C T G A G C T C G T A A C G T C G T A A C G T C G T A C G T A A C G T C G T A 1e-26-6.039e+011.65%0.01%56.2bp (21.9bp)PB0187.1_Tcf7_2/Jaspar(0.671)
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motif file (matrix)
15 A C T G A G C T C G T A A G T C A C G T A C G T A C G T A C T G C T G A A C G T C T G A C G A T 1e-24-5.554e+011.65%0.01%57.4bp (54.3bp)PB0084.1_Tcf7l2_1/Jaspar(0.737)
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motif file (matrix)
16 A C T G C G T A A C T G A T C G A G T C A G T C A C G T A C G T A G T C A C T G 1e-21-4.932e+011.24%0.00%59.1bp (0.0bp)ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer(0.742)
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motif file (matrix)
17 A C T G G T C A A C T G A G T C T C G A A C T G C G A T A C G T 1e-17-3.981e+014.95%0.77%59.0bp (67.3bp)BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer(0.734)
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motif file (matrix)
18 A C T G A T G C A G T C A C G T C T G A A C G T A C T G C T A G A C G T A C T G 1e-16-3.849e+011.93%0.06%48.6bp (38.2bp)BHLHE22/MA0818.1/Jaspar(0.676)
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motif file (matrix)
19 A C G T A G T C C G A T T G C A A C G T A C T G A G T C A C T G G C T A G A C T 1e-13-3.208e+010.96%0.01%59.4bp (41.6bp)PB0145.1_Mafb_2/Jaspar(0.559)
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motif file (matrix)
20 C G T A C G T A A G T C G T C A A G T C A C G T A G T C A C G T 1e-13-3.171e+014.54%0.84%59.2bp (60.1bp)Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer(0.682)
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motif file (matrix)
21 * C A G T C G T A T G A C A C G T A T C G A C G T T G C A A G T C C T G A A C T G 1e-11-2.690e+011.65%0.08%54.0bp (53.4bp)PB0051.1_Osr2_1/Jaspar(0.662)
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motif file (matrix)
22 * C G A T C G T A C G A T C G T A C G A T C G T A C G A T C G T A C G A T C G T A C G A T C G T A 1e-9-2.250e+015.50%1.69%54.0bp (61.2bp)PB0198.1_Zfp128_2/Jaspar(0.817)
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motif file (matrix)
23 * A C G T A G T C A C G T A T G C C T G A A C T G C G T A C G T A 1e-8-1.904e+014.40%1.31%58.4bp (71.6bp)STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer(0.853)
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motif file (matrix)
24 * C T A G C T A G C T A G C T A G C T A G C T A G C T A G C T A G C T A G C T A G C T A G C T A G 1e-1-4.059e+000.14%0.00%52.2bp (4.6bp)PB0097.1_Zfp281_1/Jaspar(0.912)
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motif file (matrix)