Homer de novo Motif Results (T2B_down_motif4/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 5581
Total background sequences = 43826
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 G C A T C G T A C T G A A C G T C A G T C T G A A G C T G T C A 1e-329-7.583e+0234.01%13.53%166.5bp (150.4bp)Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer(0.930)
More Information | Similar Motifs Found
motif file (matrix)
2 T C G A C A G T A C T G G T C A A T G C A G C T G T A C C G T A 1e-196-4.524e+0224.43%10.37%179.9bp (147.9bp)AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer(0.976)
More Information | Similar Motifs Found
motif file (matrix)
3 A C G T A C G T C A T G A G T C C G T A A C G T G T A C C G T A 1e-89-2.067e+0211.92%5.04%182.2bp (142.2bp)Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer(0.969)
More Information | Similar Motifs Found
motif file (matrix)
4 G A C T G C A T C A T G T A C G T G A C G C T A T C G A T C A G 1e-87-2.007e+0240.93%28.51%188.8bp (151.7bp)NFI-halfsite(CTF)/LNCaP-NFI-ChIP-Seq(Unpublished)/Homer(0.933)
More Information | Similar Motifs Found
motif file (matrix)
5 A T G C G C A T A C T G A C T G G T A C C T A G A T G C A G T C 1e-64-1.480e+0221.95%13.58%215.5bp (149.4bp)PB0113.1_E2F3_2/Jaspar(0.792)
More Information | Similar Motifs Found
motif file (matrix)
6 A C G T T A C G C G T A T C G A G C T A A T C G T A C G A T G C 1e-46-1.062e+0220.65%13.64%183.4bp (144.9bp)PB0170.1_Sox17_2/Jaspar(0.759)
More Information | Similar Motifs Found
motif file (matrix)
7 C G A T C T G A C T G A A G T C A T G C C T G A A G T C C G T A 1e-40-9.255e+0111.76%6.82%209.2bp (144.3bp)RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer(0.947)
More Information | Similar Motifs Found
motif file (matrix)
8 A T G C G T C A A T G C G C A T T C A G A G C T A C T G G A C T 1e-36-8.378e+0143.21%34.99%204.3bp (150.3bp)AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer(0.691)
More Information | Similar Motifs Found
motif file (matrix)
9 C G T A A C T G A C T G A C T G A G C T A C T G A C G T A C T G 1e-36-8.359e+0112.22%7.40%204.3bp (142.8bp)EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer(0.922)
More Information | Similar Motifs Found
motif file (matrix)
10 A C T G C G T A A C G T A C G T G A C T C G T A A C G T C T A G 1e-32-7.442e+0112.83%8.13%197.3bp (142.4bp)MA0594.1_Hoxa9/Jaspar(0.902)
More Information | Similar Motifs Found
motif file (matrix)
11 C A T G A T C G A T G C G A T C G A C T A T C G A C G T A C G T 1e-29-6.714e+0133.08%26.26%197.0bp (149.8bp)MA0146.2_Zfx/Jaspar(0.739)
More Information | Similar Motifs Found
motif file (matrix)
12 A G T C A G T C A C G T A C G T A C T G A C G T C T G A G C T A 1e-22-5.262e+0137.08%30.83%198.6bp (145.0bp)MA0442.1_SOX10/Jaspar(0.865)
More Information | Similar Motifs Found
motif file (matrix)