Homer de novo Motif Results (T2B_up_motif/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
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More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 6630
Total background sequences = 42543
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 C T A G T C G A G C A T C A T G G C T A T A C G C G A T G T A C C T G A A G T C 1e-650-1.497e+0330.62%7.68%53.6bp (65.8bp)Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer(0.990)
More Information | Similar Motifs Found
motif file (matrix)
2 C G A T A C T G C T A G T C G A C G T A G C T A C T G A G C A T G A C T G A C T 1e-318-7.336e+0241.95%21.11%54.7bp (63.8bp)NFATC1/MA0624.1/Jaspar(0.940)
More Information | Similar Motifs Found
motif file (matrix)
3 T G C A T G A C G C A T C T G A T C G A T A G C T A G C C G T A T A G C G C T A 1e-315-7.265e+0236.03%16.64%54.0bp (64.9bp)RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer(0.924)
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motif file (matrix)
4 T G C A A C G T C A T G C G T A T A G C T C A G C G A T G T A C C G T A A G C T G A T C A G C T 1e-178-4.107e+0210.38%2.87%53.1bp (63.1bp)Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer(0.932)
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motif file (matrix)
5 T C A G T G A C A G T C C G T A A C T G G T A C A C G T A C T G A C T G A T G C C G A T C G T A 1e-161-3.728e+0223.42%11.52%54.7bp (65.1bp)Twist2(bHLH)/Myoblast-Twist2.Ty1-ChIP-Seq(GSE127998)/Homer(0.985)
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motif file (matrix)
6 C G T A A C T G A G T C G A T C T C G A T G C A T C G A C A T G 1e-152-3.503e+0245.75%30.34%55.7bp (65.2bp)NFIX/MA0671.1/Jaspar(0.916)
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motif file (matrix)
7 A C G T C T G A T G A C G C A T C A T G C A G T A G T C C G A T T C A G T A C G 1e-126-2.906e+0238.42%25.06%56.0bp (65.7bp)Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer(0.957)
More Information | Similar Motifs Found
motif file (matrix)
8 C G A T C T G A A C G T C A G T C G A T C G A T G A C T T G A C T A G C G C T A 1e-110-2.545e+0227.35%16.41%55.0bp (65.7bp)FOXD2/MA0847.1/Jaspar(0.862)
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motif file (matrix)
9 A C T G A C G T A C G T C G T A A C G T A C T G G T C A A G T C 1e-33-7.649e+018.37%4.86%56.4bp (60.7bp)PB0120.1_Foxj1_2/Jaspar(0.784)
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motif file (matrix)
10 * C G T A A G T C A C G T A G T C A C G T C G T A A C G T A G T C A G T C C G T A 1e-8-1.910e+010.17%0.02%48.3bp (29.7bp)DMRT3/MA0610.1/Jaspar(0.589)
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motif file (matrix)
11 * A G T C C G T A A C G T A C G T A C T G A G T C C G A T A G C T A C G T T A C G A G T C C G A T 1e-7-1.649e+010.68%0.27%60.5bp (57.0bp)Pou5f1::Sox2/MA0142.1/Jaspar(0.606)
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motif file (matrix)
12 * A G T C C G T A A G T C A G T C C G T A A C T G A C T G C G T A A C G T A C T G C T G A A C G T 1e-2-5.520e+000.05%0.01%37.5bp (71.1bp)SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer(0.677)
More Information | Similar Motifs Found
motif file (matrix)