Homer de novo Motif Results (4a_Meth_k3/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
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More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 3399
Total background sequences = 46278
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 A T G C G A T C G C T A A G C T A G C T T C A G G C A T A G C T G A T C C A T G 1e-437-1.008e+0370.02%32.43%230.1bp (222.0bp)Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer(0.967)
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motif file (matrix)
2 T G C A T G C A C G T A C A T G C T A G T A C G T G A C C G A T C A T G A G C T A C G T G C A T 1e-50-1.155e+0228.10%17.67%263.2bp (220.1bp)ZNF341/MA1655.1/Jaspar(0.680)
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motif file (matrix)
3 T A G C G T C A T G C A C G A T A C T G G A T C G C A T A T C G A T G C G C T A A G C T G A C T 1e-49-1.139e+0223.27%13.77%255.4bp (225.7bp)Zfp57(Zf)/H1-ZFP57.HA-ChIP-Seq(GSE115387)/Homer(0.626)
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motif file (matrix)
4 G C A T A T C G T G C A T A G C G C A T C T A G C A T G A G T C T C G A A G T C C G A T A T C G 1e-46-1.066e+0216.48%8.75%235.5bp (222.8bp)Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer(0.711)
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motif file (matrix)
5 A G T C C A T G T A C G T A C G T A G C C G T A C A T G G T A C G C A T T C A G 1e-45-1.045e+0239.04%27.74%268.8bp (227.6bp)BHLHE22(var.2)/MA1635.1/Jaspar(0.974)
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motif file (matrix)
6 T G A C G T C A A C G T G T C A T G C A G T A C C G T A T A G C C G T A T C A G C G T A C T A G 1e-41-9.587e+0136.95%26.30%264.0bp (220.1bp)PB0121.1_Foxj3_2/Jaspar(0.656)
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motif file (matrix)
7 A C T G A T G C A G T C C G T A G C A T A C G T A T G C C G T A 1e-41-9.492e+0142.54%31.48%264.2bp (220.7bp)PB0178.1_Sox8_2/Jaspar(0.740)
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motif file (matrix)
8 T A C G G C T A C T G A C A G T C T A G C A T G C T G A T A G C G T C A T G C A A C G T G C A T 1e-40-9.308e+0112.30%6.09%280.1bp (221.3bp)NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer(0.637)
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motif file (matrix)
9 C G T A T A G C C T G A G T C A C G T A T A C G T C G A A T G C A C G T A C T G 1e-38-8.793e+0151.60%40.54%270.7bp (224.4bp)Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer(0.647)
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motif file (matrix)
10 A G T C G T C A A G C T A C G T A T C G A G C T C A G T T G A C C A G T A T G C C G A T A T C G 1e-36-8.410e+0123.89%15.50%273.4bp (223.0bp)Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer(0.665)
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motif file (matrix)
11 C G A T A C T G C G T A A G C T T C A G A C G T T G A C C G T A A G C T G A C T 1e-33-7.682e+0118.30%11.22%228.6bp (220.0bp)CREB5(bZIP)/LNCaP-CREB5.V5-ChIP-Seq(GSE137775)/Homer(0.957)
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motif file (matrix)
12 A C G T T C G A A C G T A G C T T C A G C A G T C A G T A G T C C G A T A T C G 1e-26-6.006e+0114.71%9.04%262.5bp (220.9bp)PB0122.1_Foxk1_2/Jaspar(0.620)
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motif file (matrix)
13 G T A C T G C A C G A T A C G T T C A G A C G T A G C T A T G C G T A C A G T C 1e-25-5.892e+015.68%2.42%252.6bp (213.8bp)RBPJ/MA1116.1/Jaspar(0.681)
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motif file (matrix)
14 T A C G A T G C C G T A A G C T C A G T G T A C G C A T A T G C C G A T C T A G 1e-21-4.919e+019.06%5.07%275.5bp (223.1bp)PRDM1/MA0508.3/Jaspar(0.715)
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motif file (matrix)
15 G C A T T A C G C G T A C T G A A C G T A T C G C G T A G A T C C G A T A G T C 1e-21-4.856e+0116.50%11.05%277.1bp (222.4bp)JUN(var.2)/MA0489.1/Jaspar(0.746)
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motif file (matrix)
16 G C A T C T A G G A C T G A C T A G C T T G C A G T A C C G T A G T A C G C T A C T A G C G T A 1e-21-4.840e+014.80%2.07%293.4bp (215.0bp)Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer(0.843)
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motif file (matrix)
17 T G C A C G T A G A C T C T G A C T G A T A C G T G A C A G C T 1e-19-4.402e+0117.92%12.50%259.6bp (220.8bp)NR1H4/MA1110.1/Jaspar(0.674)
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motif file (matrix)
18 C T G A A T G C C G T A A T C G A C G T A C T G A G C T C A G T A C T G C G T A 1e-18-4.324e+0138.51%31.25%275.6bp (222.7bp)Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer(0.729)
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motif file (matrix)
19 A T G C C G A T G T A C G C A T A C T G T A G C A G T C G T C A G A C T A T C G 1e-15-3.493e+0112.62%8.54%287.3bp (224.5bp)NFIC/MA0161.2/Jaspar(0.693)
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motif file (matrix)
20 * A G T C T G A C A T C G A C G T A C G T G T C A C A G T C G A T 1e-10-2.341e+0110.00%7.02%269.0bp (214.5bp)OVOL1/MA1544.1/Jaspar(0.795)
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motif file (matrix)
21 * A C T G A C T G T G C A T C A G A T C G A C T G A C T G A T C G 1e-7-1.656e+0118.51%15.16%266.2bp (207.8bp)MAZ/MA1522.1/Jaspar(0.916)
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motif file (matrix)
22 * C G T A A C T G C G T A A C G T A C T G A C T G A C T G A G T C 1e-6-1.477e+014.18%2.69%250.2bp (221.7bp)NEUROG2(var.2)/MA1642.1/Jaspar(0.767)
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motif file (matrix)
23 * A G T C A G T C A G T C A G T C A G T C A G T C C G T A C G T A A C T G A G T C A G T C C T G A 1e-3-8.089e+000.18%0.03%129.7bp (214.3bp)PB0100.1_Zfp740_1/Jaspar(0.735)
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motif file (matrix)
24 * C G T A G T C A A G T C C G T A A C T G A G T C C G T A A C T G A G T C C G T A A C T G A G T C 1e-3-7.630e+001.38%0.82%249.8bp (259.9bp)PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer(0.713)
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motif file (matrix)
25 * C G T A A C T G A G T C A C G T A C G T A C T G A C G T A C T G A C G T A C G T C G T A A C T G 1e-2-5.965e+000.06%0.00%203.9bp (233.7bp)OSR2/MA1646.1/Jaspar(0.648)
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motif file (matrix)
26 * A C G T C G T A A C G T C G T A A G T C A G T C C G T A A G T C C G T A A C T G A C T G A C G T 1e-2-5.965e+000.06%0.00%182.0bp (98.7bp)RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer(0.708)
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motif file (matrix)
27 * A C T G A C T G A C T G A C T G A G T C A C T G A C T G C G T A A C T G A G T C C G T A A C T G 1e-2-5.255e+009.50%8.26%279.9bp (214.3bp)Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer(0.817)
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motif file (matrix)