Homer de novo Motif Results (moffitt_SBHA_motif/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
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More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 501
Total background sequences = 44091
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 G T C A A G C T T A G C C T A G T C G A G T C A A G C T T A C G A T C G T G C A 1e-110-2.542e+028.18%0.01%57.5bp (9.6bp)TEAD3(TEA)/HepG2-TEAD3-ChIP-Seq(Encode)/Homer(0.617)
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motif file (matrix)
2 A G T C C A T G A G T C C G A T A C G T A C G T A T C G C T G A A C T G A C T G A G T C A G T C 1e-31-7.190e+012.59%0.01%41.0bp (31.0bp)Zac1(Zf)/Neuro2A-Plagl1-ChIP-Seq(GSE75942)/Homer(0.648)
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motif file (matrix)
3 G C T A A G T C C T G A A C T G C G T A A C T G A G C T A C G T C A T G C G T A C G T A A G T C 1e-30-6.976e+013.99%0.05%50.6bp (53.7bp)VDR/MA0693.2/Jaspar(0.591)
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motif file (matrix)
4 T C A G T C G A C T G A G C T A C A T G C T A G C T G A C G T A C T G A C A T G C T A G T C G A 1e-29-6.754e+0117.56%4.15%52.7bp (95.8bp)T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer(0.724)
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motif file (matrix)
5 G C T A C G T A A G C T A T G C C G T A A G C T A G T C G T C A A G C T G T A C T G C A T G C A 1e-29-6.742e+0110.38%1.30%58.4bp (76.3bp)PH0017.1_Cux1_2/Jaspar(0.733)
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motif file (matrix)
6 C T A G G A C T T G C A T G A C C T G A A T C G A G C T C T G A C G A T C T G A A G C T C G T A 1e-28-6.553e+012.40%0.01%50.6bp (19.4bp)POL012.1_TATA-Box/Jaspar(0.598)
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motif file (matrix)
7 A G T C C G T A A C G T A C G T A G T C A C G T A G T C C G T A A C T G C G T A C G T A C G T A 1e-24-5.736e+012.79%0.02%67.7bp (110.8bp)STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer(0.793)
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motif file (matrix)
8 C T G A A C G T A T G C A C G T C T A G A T G C C G T A C G T A A C T G A C G T A C T G C T A G 1e-23-5.382e+012.99%0.04%37.3bp (73.2bp)NKX2-3/MA0672.1/Jaspar(0.671)
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motif file (matrix)
9 G T C A C G T A C G T A A T G C A G C T C G T A A T C G C G T A T A G C C T G A C T A G C G T A 1e-21-4.960e+013.59%0.10%65.8bp (67.2bp)Smad4/MA1153.1/Jaspar(0.638)
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motif file (matrix)
10 A G T C A C G T A C G T A C G T A C T G C G T A A C G T C G T A A C G T A C G T A C G T A C G T 1e-21-4.919e+012.20%0.01%56.1bp (46.2bp)Tcf7/MA0769.1/Jaspar(0.832)
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motif file (matrix)
11 A C T G C G T A A C G T A G T C C G T A A T C G A C G T A C T G A T G C G T C A C T G A C G T A 1e-20-4.647e+011.60%0.00%46.5bp (34.0bp)Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer(0.660)
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motif file (matrix)
12 A C G T A C T G A C T G C G T A A C T G A G T C A C T G A G T C C G A T A C G T 1e-17-4.094e+011.60%0.01%46.4bp (36.5bp)POL013.1_MED-1/Jaspar(0.645)
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motif file (matrix)
13 A C T G A C G T A C G T C T G A A G T C C G T A A C G T A T G C C G T A A G T C A G T C A C G T 1e-17-3.990e+011.40%0.00%64.2bp (0.0bp)Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer(0.717)
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motif file (matrix)
14 G A T C A G T C A G T C A G T C C G A T A C T G G A C T C T G A A C T G A C T G A G T C C G T A 1e-15-3.506e+011.40%0.01%48.9bp (23.8bp)TFAP2B(var.3)/MA0813.1/Jaspar(0.687)
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motif file (matrix)
15 A G C T G A T C A C G T A C G T A G C T G T A C A G C T A G C T A C G T G T A C G C A T A G C T 1e-14-3.431e+016.59%1.12%49.2bp (107.3bp)IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer(0.606)
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motif file (matrix)
16 C G T A T C A G C G T A C T A G G T A C G T C A A C T G C G A T A C G T G A C T 1e-14-3.414e+017.39%1.44%60.2bp (70.8bp)BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer(0.694)
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motif file (matrix)
17 G T A C C G T A C G T A G T A C A T G C A T C G A C T G C G T A 1e-14-3.395e+013.59%0.25%53.4bp (74.7bp)ETV2/MA0762.1/Jaspar(0.743)
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motif file (matrix)
18 A C T G C G T A C G T A C G T A A G T C C G T A A G T C A G C T A T G C A G C T 1e-14-3.241e+013.79%0.32%50.3bp (68.3bp)Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer(0.649)
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motif file (matrix)
19 * A C T G A C G T C G T A A G T C A C G T A G C T A C G T A C T G 1e-9-2.160e+014.39%0.82%54.2bp (65.7bp)PB0152.1_Nkx3-1_2/Jaspar(0.774)
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motif file (matrix)
20 * C G T A G A C T T G C A G C T A C G T A G C T A C G A T C G T A G A C T C T G A G A C T C T G A 1e-7-1.744e+015.59%1.62%55.9bp (56.0bp)PB0080.1_Tbp_1/Jaspar(0.689)
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motif file (matrix)
21 * C G T A A G T C C T A G A C T G G T C A G T C A A C T G A T G C 1e-5-1.322e+013.59%0.93%62.5bp (63.0bp)PB0050.1_Osr1_1/Jaspar(0.755)
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motif file (matrix)
22 * C T A G C T A G C T A G C T A G A C T G A C T G A C T G A C T G C T A G C T A G C T A G C T A G 1e-4-9.653e+005.59%2.45%50.8bp (73.0bp)PB0097.1_Zfp281_1/Jaspar(0.915)
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motif file (matrix)