Homer de novo Motif Results (pgn_vs_input_motif/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 803
Total background sequences = 47000
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 C T G A T A C G T G A C C G A T T C A G T G C A G T A C A C G T C T A G T G C A C G T A G T C A 1e-19-4.502e+0118.68%8.40%44.8bp (58.7bp)Ddit3::Cebpa/MA0019.1/Jaspar(0.634)
More Information | Similar Motifs Found
motif file (matrix)
2 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T 1e-16-3.689e+0114.94%6.60%85.0bp (64.0bp)PB0182.1_Srf_2/Jaspar(0.837)
More Information | Similar Motifs Found
motif file (matrix)
3 T G C A T G A C G T C A G T C A G T C A C G A T G A C T C T G A C A T G A G T C 1e-14-3.417e+0120.67%11.00%56.6bp (62.8bp)PH0107.1_Msx2/Jaspar(0.789)
More Information | Similar Motifs Found
motif file (matrix)
4 A T C G C G T A C T G A G C A T C T A G A T C G C G T A C T G A G C A T T A C G A T C G C G T A 1e-13-3.216e+011.00%0.01%54.7bp (63.0bp)TEAD1(TEAD)/HepG2-TEAD1-ChIP-Seq(Encode)/Homer(0.703)
More Information | Similar Motifs Found
motif file (matrix)
5 A C G T A C G T A G C T A T C G C T A G A C T G A C G T C G T A A T G C A C G T A C G T A C G T 1e-13-3.103e+010.75%0.00%58.6bp (0.0bp)PH0117.1_Nkx3-1/Jaspar(0.719)
More Information | Similar Motifs Found
motif file (matrix)
6 C T A G C T A G T G A C C G T A A T C G C T A G C T G A T C A G C T G A C G T A 1e-12-2.846e+0118.80%10.32%41.2bp (55.9bp)SPIB/MA0081.1/Jaspar(0.686)
More Information | Similar Motifs Found
motif file (matrix)
7 * C G T A G T A C A C G T A T G C A T G C A C T G A C T G A G C T A C G T A C T G C G T A A C G T 1e-11-2.688e+010.75%0.01%63.3bp (29.7bp)PH0016.1_Cux1_1/Jaspar(0.590)
More Information | Similar Motifs Found
motif file (matrix)
8 * A T G C C G A T C G T A A T G C A G C T C G T A C G T A G T C A 1e-11-2.659e+0117.19%9.34%65.6bp (61.8bp)PB0154.1_Osr1_2/Jaspar(0.699)
More Information | Similar Motifs Found
motif file (matrix)
9 * T A C G A T G C A T G C C G A T A T G C G A T C A G T C C T A G C T G A C T A G C A G T G C A T 1e-10-2.476e+0120.55%12.22%36.7bp (57.3bp)GLIS3(Zf)/Thyroid-Glis3.GFP-ChIP-Seq(GSE103297)/Homer(0.682)
More Information | Similar Motifs Found
motif file (matrix)
10 * A G C T A C T G A C G T A C T G A C G T A C T G A C G T A C T G A C G T A C T G A C G T A C T G 1e-9-2.106e+016.35%2.39%76.8bp (90.0bp)PB0130.1_Gm397_2/Jaspar(0.716)
More Information | Similar Motifs Found
motif file (matrix)
11 * A T C G C G A T C G T A C G A T C T G A G A C T C T G A G C T A A G C T C G T A A G C T C T G A 1e-8-1.869e+011.25%0.09%54.9bp (63.5bp)PB0187.1_Tcf7_2/Jaspar(0.629)
More Information | Similar Motifs Found
motif file (matrix)
12 * G A T C C G T A A T G C G C A T A C T G A G T C G T C A C T G A G T A C G T A C G C A T A T G C 1e-8-1.846e+0135.37%26.31%56.5bp (61.8bp)PB0091.1_Zbtb3_1/Jaspar(0.688)
More Information | Similar Motifs Found
motif file (matrix)
13 * T C G A T A C G A C G T T G A C T C G A G A T C A C G T C T A G 1e-6-1.513e+0126.65%19.32%42.6bp (61.3bp)PB0195.1_Zbtb3_2/Jaspar(0.689)
More Information | Similar Motifs Found
motif file (matrix)
14 * T A G C G C A T T A C G A T G C G C T A T A C G A G C T A T G C 1e-6-1.490e+0140.10%31.72%56.1bp (63.0bp)PB0091.1_Zbtb3_1/Jaspar(0.785)
More Information | Similar Motifs Found
motif file (matrix)
15 * T C G A C T A G T C G A A C T G T C G A A C T G T C G A A C T G T C G A C T A G T C G A C T A G 1e-6-1.477e+012.37%0.58%52.3bp (62.6bp)PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer(0.621)
More Information | Similar Motifs Found
motif file (matrix)
16 * G A T C G C T A C G A T A T G C A C T G C G T A A C T G C G T A G T A C T G C A C G T A A G C T 1e-5-1.279e+010.75%0.05%55.1bp (56.4bp)Smad4/MA1153.1/Jaspar(0.705)
More Information | Similar Motifs Found
motif file (matrix)
17 * T A G C G A T C C G T A A G C T A G T C C T G A G T A C G T A C T G C A A G T C 1e-5-1.277e+0113.82%8.89%55.2bp (64.1bp)SREBF2/MA0596.1/Jaspar(0.642)
More Information | Similar Motifs Found
motif file (matrix)
18 * C T A G C T A G C T A G C T A G A C T G A C T G A C T G A C T G C T A G C T A G C T A G C T A G 1e-4-9.793e+000.62%0.05%58.2bp (44.2bp)PB0097.1_Zfp281_1/Jaspar(0.913)
More Information | Similar Motifs Found
motif file (matrix)
19 * A G T C C G T A A C T G C G T A A C T G A C G T A G T C A C G T 1e-3-9.024e+004.98%2.62%70.6bp (63.3bp)PB0203.1_Zfp691_2/Jaspar(0.646)
More Information | Similar Motifs Found
motif file (matrix)
20 * A C G T A G T C C G T A C G T A A C G T A C G T A C T G C G T A G A C T C G T A A C G T A C T G 1e-3-8.844e+000.25%0.00%53.0bp (0.0bp)PB0066.1_Sox17_1/Jaspar(0.705)
More Information | Similar Motifs Found
motif file (matrix)
21 * C T G A C T A G C T A G C T A G C G T A C T A G T A C G T C G A C T G A C T A G C T A G T G C A 1e-3-7.908e+001.00%0.21%59.4bp (48.2bp)EWSR1-FLI1/MA0149.1/Jaspar(0.756)
More Information | Similar Motifs Found
motif file (matrix)
22 * A G C T A G T C C T G A G C A T A T G C C G T A A C G T G T A C 1e-3-7.788e+004.61%2.51%53.3bp (63.5bp)PH0017.1_Cux1_2/Jaspar(0.702)
More Information | Similar Motifs Found
motif file (matrix)
23 * C G A T A C T G C T G A C G T A A G C T A C T G G T C A A T C G A C T G A C T G 1e-3-7.775e+001.25%0.33%58.5bp (58.8bp)GCM2/MA0767.1/Jaspar(0.685)
More Information | Similar Motifs Found
motif file (matrix)
24 * A G T C A G T C C T G A C G T A C G T A A C T G A C G T C G T A A C G T A C T G 1e-3-7.750e+000.50%0.04%62.4bp (56.4bp)PB0176.1_Sox5_2/Jaspar(0.602)
More Information | Similar Motifs Found
motif file (matrix)
25 * C G T A A G T C C G T A A G T C C G T A A C G T C G T A A C G T A T C G A C T G 1e-3-7.460e+001.12%0.28%53.2bp (72.7bp)Twist2/MA0633.1/Jaspar(0.863)
More Information | Similar Motifs Found
motif file (matrix)
26 * C G A T C T A G A G T C A G T C A G T C C T G A C T A G A G T C A C T G C G T A C T A G C G A T 1e-3-6.950e+000.37%0.03%53.1bp (64.8bp)ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer(0.738)
More Information | Similar Motifs Found
motif file (matrix)
27 * A T C G A C G T A T C G C G A T T A C G C A G T C A T G T C A G C G A T A C T G C G A T C T A G 1e-2-6.786e+003.99%2.19%56.2bp (87.0bp)MGA/MA0801.1/Jaspar(0.610)
More Information | Similar Motifs Found
motif file (matrix)
28 * A C G T A G T C C G T A A G T C C G T A A G T C A C G T A C T G C G T A A C T G C T A G A C T G 1e-1-4.078e+000.12%0.00%52.2bp (0.0bp)MGA/MA0801.1/Jaspar(0.595)
More Information | Similar Motifs Found
motif file (matrix)
29 * A G T C A C G T A C T G C G A T A G T C A C T G T C A G A C G T 1e-1-3.221e+003.24%2.23%59.9bp (59.3bp)POL009.1_DCE_S_II/Jaspar(0.722)
More Information | Similar Motifs Found
motif file (matrix)