Homer de novo Motif Results (MC_con_open_motif/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
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More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 1780
Total background sequences = 47586
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 C A T G T G C A A G C T A C G T C A G T C A G T A C T G G T A C C G T A C G T A A G C T G T C A 1e-85-1.959e+0223.37%8.12%49.9bp (61.2bp)CEBPA/MA0102.3/Jaspar(0.890)
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motif file (matrix)
2 C T A G G A T C A G T C G T C A A G T C A T G C G C A T C T G A A T C G C G A T A C T G C T A G 1e-56-1.296e+024.16%0.30%47.8bp (60.9bp)CTCF/MA0139.1/Jaspar(0.912)
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motif file (matrix)
3 C G T A C G T A T C A G T C G A A C T G A C T G T G C A C G T A T A C G A G C T C A T G T C G A 1e-51-1.190e+0211.18%3.14%50.2bp (56.7bp)PB0058.1_Sfpi1_1/Jaspar(0.956)
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motif file (matrix)
4 T C G A A C G T A C T G C G T A A T C G A C G T A G T C C G T A A C G T A G T C T C G A C T G A 1e-32-7.418e+018.48%2.75%50.7bp (60.1bp)Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer(0.981)
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motif file (matrix)
5 A G C T G A C T A C T G A T C G A T G C G C T A T G A C T C A G 1e-28-6.491e+0123.20%13.45%54.9bp (62.2bp)NFIX/MA0671.1/Jaspar(0.936)
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motif file (matrix)
6 G A C T C T A G G A C T T A C G T C A G G A C T G A C T G C A T 1e-27-6.412e+0112.13%5.33%50.0bp (59.2bp)RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer(0.960)
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motif file (matrix)
7 C T A G A T C G T A G C G T A C T G C A T A G C C G A T C A T G T A C G A T G C G A T C G C T A 1e-20-4.820e+0110.56%4.97%56.2bp (61.6bp)Bcl11a(Zf)/HSPC-BCL11A-ChIP-Seq(GSE104676)/Homer(0.725)
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motif file (matrix)
8 C A T G A C T G T A G C G C A T A C G T T A G C G T A C G A C T A C T G A T G C T G A C G T C A 1e-19-4.447e+017.42%3.04%50.8bp (60.8bp)Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer(0.792)
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motif file (matrix)
9 T C G A C T A G A G C T A G T C G C T A A G C T G T C A C G A T C G A T G C A T 1e-16-3.764e+015.45%2.07%59.7bp (58.0bp)NEUROG2/MA0669.1/Jaspar(0.627)
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motif file (matrix)
10 C G A T C A G T A T G C A C G T C G T A A C G T A G C T A C G T A C G T C G A T C T G A G C T A 1e-15-3.578e+010.79%0.03%41.4bp (38.4bp)MEF2C/MA0497.1/Jaspar(0.862)
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motif file (matrix)
11 C T A G T C A G T C G A G T C A G A C T A C G T A C G T G A T C G T A C G T A C 1e-14-3.302e+0110.79%5.96%54.9bp (61.1bp)NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer(0.894)
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motif file (matrix)
12 G C T A A T C G A G T C A T G C C T G A T C A G G T A C A C G T T A C G T A C G 1e-13-3.136e+0111.52%6.63%54.7bp (62.9bp)Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer(0.781)
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motif file (matrix)
13 C A T G G T A C A T G C G T A C A G C T G C A T A C G T A C T G A G T C G A C T 1e-13-3.085e+012.70%0.73%54.9bp (62.7bp)Sox2/MA0143.3/Jaspar(0.722)
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motif file (matrix)
14 T G A C G T A C G C T A T A C G G T C A C G A T A T C G A G C T A G C T G A C T A G T C G A T C 1e-12-2.965e+019.38%5.13%55.0bp (60.2bp)ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer(0.843)
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motif file (matrix)
15 * C G T A C T G A C T A G A G T C G T A C T C G A T G A C T G A C A T C G C T G A 1e-11-2.658e+016.35%3.11%57.7bp (60.8bp)RUNX1/MA0002.2/Jaspar(0.650)
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motif file (matrix)
16 * G T A C T G C A G C T A T A G C A G T C T A G C T G A C T A C G C G A T A G C T 1e-10-2.483e+016.57%3.36%59.5bp (60.0bp)GRHL2/MA1105.1/Jaspar(0.634)
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motif file (matrix)
17 * T G C A A C T G G T A C T A G C C G A T A C T G C G A T T C A G T G C A C T A G 1e-10-2.479e+015.51%2.62%56.6bp (64.9bp)MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer(0.658)
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motif file (matrix)
18 * G T C A A T G C C A T G A C G T A G T C C G T A G T C A G T C A C T G A A G T C A G T C A C G T 1e-9-2.277e+010.45%0.01%43.6bp (33.9bp)MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar(0.689)
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motif file (matrix)
19 * C T G A C T A G A T G C T A G C A C T G C G T A T C G A G C T A 1e-9-2.265e+0118.20%12.91%56.3bp (63.2bp)IRF4/MA1419.1/Jaspar(0.649)
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motif file (matrix)
20 * C T A G G A T C G C T A G C A T A C G T A C G T G T C A G A T C T A C G G T A C 1e-9-2.190e+013.88%1.66%58.1bp (62.3bp)Barhl1/MA0877.1/Jaspar(0.658)
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motif file (matrix)
21 * A C T G A C G T A G C T C A T G A G T C A G T C C G T A A G C T C T A G C T A G A G T C C T G A 1e-9-2.116e+011.01%0.15%53.9bp (54.0bp)X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer(0.901)
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motif file (matrix)
22 * A G C T G A C T T G A C A G T C T C A G G A T C C A G T A C G T C A G T G C A T 1e-8-1.935e+011.18%0.24%45.2bp (62.9bp)SPI1/MA0080.4/Jaspar(0.730)
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motif file (matrix)
23 * C G T A A C T G C G T A A C T G G T A C A T G C A C T G A G T C A T G C A G T C 1e-8-1.846e+011.85%0.57%52.6bp (57.6bp)Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer(0.581)
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motif file (matrix)
24 * C G T A A C G T C G T A A C T G A G T C A G T C A G T C A G T C C A T G A G T C A G T C A G T C 1e-6-1.582e+010.28%0.01%54.1bp (17.0bp)KLF5/MA0599.1/Jaspar(0.811)
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motif file (matrix)
25 * C T A G A T G C C G T A A C T G A T C G A T G C C T A G A C T G C G T A A C G T A C T G C G T A 1e-5-1.247e+010.84%0.20%55.6bp (55.4bp)PB0124.1_Gabpa_2/Jaspar(0.655)
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motif file (matrix)
26 * C G T A C G T A A C G T C G T A C G T A C G T A A C T G A G T C A G T C A C T G 1e-5-1.202e+010.22%0.01%59.6bp (52.2bp)HOXA13/MA0650.1/Jaspar(0.672)
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motif file (matrix)
27 * A C G T A G T C A C T G A G T C A C G T C G T A A G T C A C T G A C T G C G T A A G T C A G T C 1e-3-8.439e+000.17%0.01%57.2bp (43.7bp)HINFP(Zf)/K562-HINFP.eGFP-ChIP-Seq(Encode)/Homer(0.603)
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motif file (matrix)
28 * C T A G C T G A C T G A T C G A C T G A C G T A C G T A C G T A G C T A C G T A 1e-3-7.061e+004.55%3.15%55.4bp (69.8bp)ZNF384/MA1125.1/Jaspar(0.869)
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motif file (matrix)
29 * C G A T A G T C G T A C A C T G A G T C A G T C A G T C C G T A A G T C G T A C A C T G A G T C 1e-3-6.962e+000.17%0.01%25.0bp (56.8bp)Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer(0.749)
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motif file (matrix)
30 * A C G T A C T G A C G T C G T A A C G T A C T G C G T A A C T G A C G T A C T G A C G T C T A G 1e-2-5.309e+000.17%0.02%47.3bp (53.0bp)PB0170.1_Sox17_2/Jaspar(0.713)
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motif file (matrix)