Homer de novo Motif Results (VEP_hfd_open_motif/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
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More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 758
Total background sequences = 48531
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 T A G C T G C A A T C G A C T G T G C A G C T A C T A G G A C T 1e-65-1.509e+0247.10%19.41%50.2bp (61.9bp)ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer(0.965)
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motif file (matrix)
2 A G C T C T A G G T A C A G T C T G C A A G T C A G T C G A C T T G C A T A C G G A C T A C T G 1e-57-1.322e+0210.16%0.79%44.0bp (58.1bp)CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer(0.876)
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motif file (matrix)
3 A G C T A C T G C G T A T A G C A C G T G T A C C T G A A G C T 1e-23-5.419e+0111.74%3.32%48.1bp (59.4bp)FOS::JUND/MA1141.1/Jaspar(0.967)
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motif file (matrix)
4 G T A C T A G C C G T A A T C G G T A C C T G A A C T G C T G A C A T G A C T G 1e-19-4.519e+019.76%2.76%44.8bp (58.0bp)BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer(0.746)
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motif file (matrix)
5 T A G C A C G T C T G A A G T C A C G T A C T G A G C T A G T C G T A C C G T A C T A G A C T G 1e-15-3.635e+011.85%0.06%40.9bp (67.6bp)ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer(0.671)
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motif file (matrix)
6 * C A T G G A C T A G T C G C T A T G A C T C G A C T G A T A C G A C T G T A C G T C G A C G T A 1e-11-2.708e+013.96%0.79%57.6bp (56.7bp)EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer(0.679)
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motif file (matrix)
7 * A C T G A G T C A G T C C G T A A C T G C A G T A C T G A G C T C G A T A C G T A G T C A G T C 1e-11-2.673e+011.19%0.03%57.7bp (63.1bp)PB0195.1_Zbtb3_2/Jaspar(0.654)
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motif file (matrix)
8 * C G T A A C G T C G T A A C G T A G T C A G T C A C G T A C G T A C T G C G T A T G A C C G A T 1e-11-2.647e+010.92%0.01%46.6bp (43.1bp)SD0003.1_at_AC_acceptor/Jaspar(0.828)
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motif file (matrix)
9 * G C T A A T C G T G C A A T C G G A T C A G C T A G T C G A C T T G A C C G A T C T A G C A T G 1e-11-2.617e+015.94%1.76%61.6bp (59.1bp)ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer(0.701)
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motif file (matrix)
10 * A G C T T A C G C A G T A G T C A T G C C T A G A G T C G T C A A C T G C T G A 1e-11-2.549e+018.44%3.24%54.1bp (61.4bp)HINFP/MA0131.2/Jaspar(0.653)
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motif file (matrix)
11 * A T C G C A G T A G C T A C T G A T C G T A G C T G C A A T C G 1e-11-2.538e+0121.11%12.36%52.5bp (61.2bp)NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer(0.830)
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motif file (matrix)
12 * A T G C C A T G A G C T A G C T A C T G A C G T G C A T A G T C A C G T A T C G 1e-10-2.437e+012.77%0.42%49.8bp (60.1bp)Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer(0.736)
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motif file (matrix)
13 * C A G T A C T G G T C A A T G C T C G A C T G A A G T C C G T A C G T A T C A G 1e-10-2.369e+014.75%1.28%49.3bp (61.6bp)PB0120.1_Foxj1_2/Jaspar(0.737)
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motif file (matrix)
14 * C G T A C G T A A G T C A G T C G T C A C G T A A C T G T G C A A T G C G T C A A T C G C G T A 1e-10-2.349e+011.32%0.06%54.7bp (58.4bp)PB0060.1_Smad3_1/Jaspar(0.625)
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motif file (matrix)
15 * C G T A A C T G G T A C C G T A A C T G A G T C A C G T C T G A A C G T A C G T C G A T A G T C 1e-10-2.322e+010.92%0.02%50.2bp (69.1bp)Ascl2/MA0816.1/Jaspar(0.694)
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motif file (matrix)
16 * A C G T A C G T G T C A C G T A A C G T A G T C A C G T G T C A C G T A A C T G C G T A C G T A 1e-9-2.216e+010.66%0.01%45.0bp (19.3bp)STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer(0.664)
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motif file (matrix)
17 * A C G T A C G T C G T A A C G T A C T G A C G T C G T A C G T A A C G T A G T C 1e-8-1.984e+010.53%0.00%47.0bp (35.2bp)NFIL3/MA0025.1/Jaspar(0.869)
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motif file (matrix)
18 * T A C G T C A G T A G C A G T C G C T A A C T G C A T G A T G C A T G C T G C A 1e-8-1.976e+015.94%2.16%56.4bp (60.0bp)ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer(0.732)
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motif file (matrix)
19 * G C T A A C T G G C A T T G A C A G T C C G T A G T A C C G T A 1e-7-1.801e+0119.66%12.49%55.0bp (59.3bp)Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer(0.833)
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motif file (matrix)
20 * G T A C A G C T C G T A C T G A G T C A C G T A C T G A A C G T C G T A C A T G 1e-7-1.762e+012.37%0.45%49.4bp (61.2bp)MEF2A/MA0052.3/Jaspar(0.950)
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motif file (matrix)
21 * A G T C A G T C G T C A A C T G A G T C A C T G C G T A A C T G A C T G A G T C G T C A C G T A 1e-7-1.761e+010.66%0.01%52.1bp (43.5bp)ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer(0.645)
More Information | Similar Motifs Found
motif file (matrix)
22 * C G A T A T G C T G C A A T G C T C A G T A G C T G C A C A T G G A T C G C A T 1e-7-1.744e+013.17%0.80%51.7bp (59.2bp)NHLH1/MA0048.2/Jaspar(0.681)
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motif file (matrix)
23 * A G T C A C T G C T G A A T G C C A T G C T G A A C G T A C G T 1e-7-1.662e+011.85%0.28%41.9bp (60.2bp)PB0179.1_Sp100_2/Jaspar(0.632)
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motif file (matrix)
24 * G T C A A T C G A G C T C G T A A T C G A T C G A C G T A C T G C T A G C G A T 1e-6-1.430e+012.51%0.63%48.2bp (57.3bp)MAX::MYC/MA0059.1/Jaspar(0.723)
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motif file (matrix)
25 * C G T A C G T A A C T G C G T A A G T C C G T A A T C G A G T C A C T G A C T G 1e-6-1.426e+010.92%0.06%69.8bp (65.3bp)YY1(Zf)/Promoter/Homer(0.656)
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motif file (matrix)
26 * A C T G A G T C A G T C A G T C A G T C C G T A A C T G A G T C A G T C C G T A A G T C C T A G 1e-4-1.016e+010.40%0.01%33.8bp (35.8bp)Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer(0.683)
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motif file (matrix)
27 * A G T C G T C A A C T G A G T C A C G T C G T A G T A C A G T C A G T C A G T C 1e-2-5.607e+0011.61%8.69%58.3bp (60.0bp)Myod1/MA0499.1/Jaspar(0.647)
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motif file (matrix)