Homer de novo Motif Results (LnCaP_res_vs_sen_motif/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
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More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 61
Total background sequences = 33750
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 A G T C A T C G C T G A C A T G C G A T G T A C A G T C C G T A A C G T A C G T A G T C A T C G 1e-118-2.721e+0249.18%0.00%53.0bp (0.0bp)PB0170.1_Sox17_2/Jaspar(0.523)
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motif file (matrix)
2 A G T C C G T A A C G T A G C T A G T C A C T G C G T A A G C T A C T G C G T A 1e-84-1.944e+0239.34%0.01%51.6bp (11.0bp)PB0006.1_Bcl6b_1/Jaspar(0.630)
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motif file (matrix)
3 C G A T A C T G C G T A A G C T A C T G C G T A A C G T G A C T G T A C A G T C C T G A A C G T 1e-51-1.179e+0242.62%0.24%55.5bp (100.3bp)JUN/MA0488.1/Jaspar(0.656)
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motif file (matrix)
4 A C G T A C G T A G T C A G T C A C T G A G C T C G A T A G T C A C T G C G T A 1e-24-5.675e+0122.95%0.20%33.9bp (45.4bp)SPIB/MA0081.1/Jaspar(0.776)
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motif file (matrix)
5 C G T A A G T C C T G A A C T G C G T A C T A G A G C T A C G T A C T G C G T A C G T A A G T C 1e-17-4.033e+0113.11%0.04%67.2bp (94.8bp)VDR/MA0693.2/Jaspar(0.598)
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motif file (matrix)
6 C G T A A C G T T A C G A C G T A G T C G T A C C G T A A G T C A C G T A C G T A T C G A T G C 1e-15-3.499e+0111.48%0.04%50.4bp (73.2bp)ZNF354C/MA0130.1/Jaspar(0.668)
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motif file (matrix)
7 A G T C A C G T A C G T A G T C T A G C A G C T G T C A A C G T G T C A C G T A C G T A C G T A 1e-14-3.350e+0116.39%0.29%51.1bp (87.3bp)Hoxd13(Homeobox)/ChickenMSG-Hoxd13.Flag-ChIP-Seq(GSE86088)/Homer(0.670)
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motif file (matrix)
8 C G T A A C T G A G C T C G T A C G T A A C G T A G T C C G A T A G T C C G T A A C T G C G T A 1e-13-3.078e+019.84%0.03%65.0bp (29.6bp)PB0138.1_Irf4_2/Jaspar(0.638)
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motif file (matrix)
9 C G T A C G T A A G T C A C G T G A C T G T A C A C G T A G C T A C G T A C T G A C G T A C T G 1e-12-2.877e+019.84%0.05%56.7bp (60.4bp)PB0166.1_Sox12_2/Jaspar(0.720)
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motif file (matrix)
10 A G T C A C T G A G T C A C G T A C G T A C G T A C T G C G T A A C T G A C T G 1e-12-2.845e+016.56%0.00%33.4bp (33.4bp)Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer(0.704)
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motif file (matrix)
11 A C G T A C G T A G C T A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C G T 1e-12-2.845e+016.56%0.00%64.9bp (20.3bp)Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer(0.719)
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motif file (matrix)
12 A G T C A G T C C G T A A C G T A C G T A C G T A G T C C G T A C G T A A C G T A C G T A C G T 1e-12-2.845e+016.56%0.00%40.3bp (11.4bp)PH0114.1_Nkx2-5/Jaspar(0.692)
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motif file (matrix)
13 * A T C G C G T A A C G T C G T A A C T G C G T A A C T G A G T C C G T A A C T G 1e-11-2.694e+019.84%0.06%18.8bp (45.0bp)ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer(0.706)
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motif file (matrix)
14 * A C G T A C G T C A G T A C T G A C G T C T G A A C T G C G T A C G T A A C G T A G T C A C G T 1e-11-2.607e+019.84%0.07%52.4bp (46.2bp)TEAD4/MA0809.1/Jaspar(0.589)
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motif file (matrix)
15 * A T C G A C G T C G T A A T C G A C G T C G T A C G T A C G T A A C T G A T C G 1e-8-1.929e+018.20%0.10%30.7bp (55.4bp)CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer(0.658)
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motif file (matrix)
16 * A C T G A C G T A G T C A G T C C T G A A C G T A C T G A C T G C G T A A C G T 1e-7-1.763e+016.56%0.05%37.2bp (64.1bp)ZNF354C/MA0130.1/Jaspar(0.612)
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motif file (matrix)
17 * A C T G T G A C T A G C A C T G A G T C A G T C A C G T C G T A 1e-7-1.728e+0113.11%0.79%33.3bp (88.5bp)PB0112.1_E2F2_2/Jaspar(0.659)
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motif file (matrix)
18 * A C T G A C G T A C T G C G T A A C G T A T C G C G A T A C G T C G A T A C T G 1e-7-1.623e+019.84%0.35%64.2bp (78.5bp)PH0134.1_Pbx1/Jaspar(0.698)
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motif file (matrix)
19 * A G T C A C G T C G T A A C G T A C T G A G T C A C T G C G T A 1e-6-1.594e+016.56%0.07%26.8bp (127.1bp)POU3F4/MA0789.1/Jaspar(0.675)
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motif file (matrix)
20 * A T C G G A C T A T G C A C G T A T C G G A C T A T G C A C G T A T C G A G C T A T G C A G C T 1e-6-1.590e+014.92%0.02%26.1bp (31.8bp)PB0166.1_Sox12_2/Jaspar(0.612)
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motif file (matrix)
21 * A C T G C G T A C G T A C G T A A G T C C G T A A G T C A C G T A G T C A C G T 1e-6-1.563e+018.20%0.20%15.6bp (110.5bp)Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer(0.630)
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motif file (matrix)
22 * C G T A G T C A A C G T C G T A A C G T A G T C A C G T A C G T 1e-5-1.181e+0116.39%2.81%59.2bp (92.8bp)SD0003.1_at_AC_acceptor/Jaspar(0.716)
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motif file (matrix)
23 * A C G T A C G T A C T G A C T G C G T A C G T A C G T A A G T C 1e-4-1.040e+0111.48%1.46%56.1bp (91.5bp)NFATC1/MA0624.1/Jaspar(0.771)
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motif file (matrix)
24 * A C G T A G T C A G T C C G T A A G T C A C G T A G T C A G T C C G T A A G T C A C G T A G T C 1e-2-6.293e+001.64%0.00%4.1bp (15.1bp)Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer(0.681)
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motif file (matrix)