Homer de novo Motif Results (LnCaP_Shp2i_vs_CTL_motif/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
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More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 31
Total background sequences = 28000
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 A G T C A G T C C G T A A C G T G A C T G A T C T A C G C G T A A C G T A C T G C G T A A C G T 1e-50-1.173e+0241.94%0.00%58.1bp (14.1bp)ZNF410/MA0752.1/Jaspar(0.577)
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motif file (matrix)
2 A C G T A C T G C G T A G A C T A C G T A T G C G A T C C G T A C G A T A C G T A T G C C T A G 1e-44-1.030e+0241.94%0.01%44.8bp (16.4bp)DUX4/MA0468.1/Jaspar(0.694)
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motif file (matrix)
3 A C T G C T A G G T A C A G T C A C G T A T G C C G T A C G T A C T G A A C T G G T A C A C T G 1e-16-3.697e+0116.13%0.01%61.3bp (7.3bp)Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer(0.645)
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motif file (matrix)
4 C G A T A C T G A G C T C T A G A C G T A C G T A G T C C G T A C G T A A G T C A C G T A G T C 1e-14-3.351e+0116.13%0.01%57.4bp (19.9bp)VDR/MA0693.2/Jaspar(0.611)
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motif file (matrix)
5 A C G T A T G C A C G T A T G C C G T A A C T G C T G A C G T A C G T A A G T C A C G T A G C T 1e-14-3.323e+0119.35%0.04%57.5bp (87.9bp)STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer(0.695)
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motif file (matrix)
6 A C G T A C G T A T C G A C G T A C G T A C G T A C T G A C T G C G T A C G T A C G T A A G T C 1e-13-3.163e+0112.90%0.00%75.2bp (18.6bp)STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer(0.667)
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motif file (matrix)
7 * A C T G C G T A C G T A C G T A A G T C C G T A A T G C A C G T A G T C A C G T A C G T A C G T 1e-11-2.658e+0116.13%0.05%42.2bp (49.1bp)DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer(0.583)
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motif file (matrix)
8 * C G A T C G T A G C A T C G T A A G T C A C T G C G T A C G T A C T A G C G T A 1e-9-2.229e+0129.03%1.34%42.7bp (84.5bp)POL008.1_DCE_S_I/Jaspar(0.669)
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motif file (matrix)
9 * G C A T A C T G A T G C C G T A C G T A C T A G C G A T A C T G A C T G C G T A 1e-9-2.111e+0132.26%2.17%43.9bp (94.2bp)PH0114.1_Nkx2-5/Jaspar(0.700)
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motif file (matrix)
10 * A C G T A G T C G T C A A G C T C G T A A C G T C G T A C T A G C G T A C G T A C G T A G T C A 1e-9-2.106e+0122.58%0.61%39.9bp (87.8bp)POL012.1_TATA-Box/Jaspar(0.644)
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motif file (matrix)
11 * A C G T A C G T A T G C C G T A C G T A C G T A A C T G T C G A A C T G A G T C C G T A A C T G 1e-8-2.025e+0119.35%0.37%35.2bp (89.7bp)CHR(?)/Hela-CellCycle-Expression/Homer(0.636)
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motif file (matrix)
12 * A C T G A C G T A C T G C G T A A C G T A T C G C G T A A C T G A C G T A C T G 1e-7-1.839e+0122.58%0.90%55.8bp (81.2bp)PH0134.1_Pbx1/Jaspar(0.649)
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motif file (matrix)
13 * C G T A A C T G C G T A A G T C A G T C A C G T A G T C A G C T A C G T A C G T A C T G C G T A 1e-7-1.771e+019.68%0.02%36.3bp (101.7bp)RORB/MA1150.1/Jaspar(0.669)
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motif file (matrix)
14 * A G T C A C T G A C G T A C G T A C T G A C T G C G T A C G T A 1e-7-1.678e+0116.13%0.32%74.8bp (92.4bp)Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer(0.718)
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motif file (matrix)
15 * A G C T C G T A A G C T C G T A A T G C A G C T A C T G A C G T C G T A A G T C C G T A A C G T 1e-6-1.485e+016.45%0.00%50.0bp (24.5bp)SOX8/MA0868.1/Jaspar(0.581)
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motif file (matrix)
16 * C G T A A G T C A C G T A C G T A C G T A C T G C G T A A C G T C G T A A C G T A C G T A C G T 1e-5-1.265e+016.45%0.01%59.8bp (48.7bp)Tcf7/MA0769.1/Jaspar(0.811)
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motif file (matrix)
17 * A G T C A G T C G T A C C G T A C G T A C T G A T C A G G A C T G T C A A C G T C T A G A G C T 1e-5-1.240e+0119.35%1.40%52.6bp (77.5bp)NEUROG2/MA0669.1/Jaspar(0.566)
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motif file (matrix)
18 * A T C G C G A T A G T C C G T A G T A C G T C A C G T A G T A C T C A G A T G C A G T C A G T C 1e-3-7.062e+003.23%0.00%0.0bp (0.0bp)ESR2/MA0258.2/Jaspar(0.610)
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motif file (matrix)
19 * A G T C A G C T C G T A A C T G C G T A G T A C C G T A C G T A A C T G C G T A A C T G A C G T 1e-3-7.062e+003.23%0.00%0.0bp (0.0bp)Smad4/MA1153.1/Jaspar(0.684)
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motif file (matrix)
20 * A G T C A G T C A C G T A C T G A C G T C G T A C T A G A C T G A G T C C G T A A C T G C G T A 1e-3-7.062e+003.23%0.00%0.0bp (12.3bp)SA0002.1_at_AC_acceptor/Jaspar(0.602)
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motif file (matrix)
21 * A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C G T C G T A A G T C 1e-2-6.661e+006.45%0.17%50.3bp (78.5bp)NFIL3/MA0025.1/Jaspar(0.705)
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motif file (matrix)
22 * A C T G A C T G A C T G A C T G A C T G A C T G A C T G A C T G A C T G A C T G A C T G A C T G 1e-1-4.502e+003.23%0.04%58.3bp (46.9bp)PB0097.1_Zfp281_1/Jaspar(0.912)
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motif file (matrix)