| Rank | Motif | P-value | log P-pvalue | % of Targets | % of Background | STD(Bg STD) | Best Match/Details | Motif File |
| 1 | 1e-50 | -1.173e+02 | 41.94% | 0.00% | 58.1bp (14.1bp) | ZNF410/MA0752.1/Jaspar(0.577) More Information | Similar Motifs Found | motif file (matrix) | |
| 2 | 1e-44 | -1.030e+02 | 41.94% | 0.01% | 44.8bp (16.4bp) | DUX4/MA0468.1/Jaspar(0.694) More Information | Similar Motifs Found | motif file (matrix) | |
| 3 | 1e-16 | -3.697e+01 | 16.13% | 0.01% | 61.3bp (7.3bp) | Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer(0.645) More Information | Similar Motifs Found | motif file (matrix) | |
| 4 | 1e-14 | -3.351e+01 | 16.13% | 0.01% | 57.4bp (19.9bp) | VDR/MA0693.2/Jaspar(0.611) More Information | Similar Motifs Found | motif file (matrix) | |
| 5 | 1e-14 | -3.323e+01 | 19.35% | 0.04% | 57.5bp (87.9bp) | STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer(0.695) More Information | Similar Motifs Found | motif file (matrix) | |
| 6 | 1e-13 | -3.163e+01 | 12.90% | 0.00% | 75.2bp (18.6bp) | STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer(0.667) More Information | Similar Motifs Found | motif file (matrix) | |
| 7 * | 1e-11 | -2.658e+01 | 16.13% | 0.05% | 42.2bp (49.1bp) | DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer(0.583) More Information | Similar Motifs Found | motif file (matrix) | |
| 8 * | 1e-9 | -2.229e+01 | 29.03% | 1.34% | 42.7bp (84.5bp) | POL008.1_DCE_S_I/Jaspar(0.669) More Information | Similar Motifs Found | motif file (matrix) | |
| 9 * | 1e-9 | -2.111e+01 | 32.26% | 2.17% | 43.9bp (94.2bp) | PH0114.1_Nkx2-5/Jaspar(0.700) More Information | Similar Motifs Found | motif file (matrix) | |
| 10 * | 1e-9 | -2.106e+01 | 22.58% | 0.61% | 39.9bp (87.8bp) | POL012.1_TATA-Box/Jaspar(0.644) More Information | Similar Motifs Found | motif file (matrix) | |
| 11 * | 1e-8 | -2.025e+01 | 19.35% | 0.37% | 35.2bp (89.7bp) | CHR(?)/Hela-CellCycle-Expression/Homer(0.636) More Information | Similar Motifs Found | motif file (matrix) | |
| 12 * | 1e-7 | -1.839e+01 | 22.58% | 0.90% | 55.8bp (81.2bp) | PH0134.1_Pbx1/Jaspar(0.649) More Information | Similar Motifs Found | motif file (matrix) | |
| 13 * | 1e-7 | -1.771e+01 | 9.68% | 0.02% | 36.3bp (101.7bp) | RORB/MA1150.1/Jaspar(0.669) More Information | Similar Motifs Found | motif file (matrix) | |
| 14 * | 1e-7 | -1.678e+01 | 16.13% | 0.32% | 74.8bp (92.4bp) | Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer(0.718) More Information | Similar Motifs Found | motif file (matrix) | |
| 15 * | 1e-6 | -1.485e+01 | 6.45% | 0.00% | 50.0bp (24.5bp) | SOX8/MA0868.1/Jaspar(0.581) More Information | Similar Motifs Found | motif file (matrix) | |
| 16 * | 1e-5 | -1.265e+01 | 6.45% | 0.01% | 59.8bp (48.7bp) | Tcf7/MA0769.1/Jaspar(0.811) More Information | Similar Motifs Found | motif file (matrix) | |
| 17 * | 1e-5 | -1.240e+01 | 19.35% | 1.40% | 52.6bp (77.5bp) | NEUROG2/MA0669.1/Jaspar(0.566) More Information | Similar Motifs Found | motif file (matrix) | |
| 18 * | 1e-3 | -7.062e+00 | 3.23% | 0.00% | 0.0bp (0.0bp) | ESR2/MA0258.2/Jaspar(0.610) More Information | Similar Motifs Found | motif file (matrix) | |
| 19 * | 1e-3 | -7.062e+00 | 3.23% | 0.00% | 0.0bp (0.0bp) | Smad4/MA1153.1/Jaspar(0.684) More Information | Similar Motifs Found | motif file (matrix) | |
| 20 * | 1e-3 | -7.062e+00 | 3.23% | 0.00% | 0.0bp (12.3bp) | SA0002.1_at_AC_acceptor/Jaspar(0.602) More Information | Similar Motifs Found | motif file (matrix) | |
| 21 * | 1e-2 | -6.661e+00 | 6.45% | 0.17% | 50.3bp (78.5bp) | NFIL3/MA0025.1/Jaspar(0.705) More Information | Similar Motifs Found | motif file (matrix) | |
| 22 * | 1e-1 | -4.502e+00 | 3.23% | 0.04% | 58.3bp (46.9bp) | PB0097.1_Zfp281_1/Jaspar(0.912) More Information | Similar Motifs Found | motif file (matrix) |