Homer de novo Motif Results (eb4_vs_eb1_motif/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
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More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 112
Total background sequences = 42000
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 C G T A A G T C A C G T A C T G A C G T C G T A A C T G A C T G C G T A A G T C T A G C A C G T 1e-16-3.897e+015.36%0.01%60.9bp (53.2bp)PH0065.1_Hoxc10/Jaspar(0.634)
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motif file (matrix)
2 A C G T A C G T A G C T A G T C A C G T A G T C A C T G A G T C A G T C C G T A A C G T C G T A 1e-16-3.867e+016.25%0.01%48.0bp (58.7bp)E2F8/MA0865.1/Jaspar(0.730)
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motif file (matrix)
3 A C G T A C G T A C G T A C G T A G T C G T A C C T A G A C G T A C T G C G T A A C G T A C G T 1e-16-3.759e+016.25%0.02%47.3bp (55.9bp)Gfi1/MA0038.1/Jaspar(0.689)
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motif file (matrix)
4 A C G T A G T C C G T A C T G A A C T G A C G T C T A G A C T G C G T A A C G T A C T G A G C T 1e-15-3.654e+015.36%0.01%69.7bp (64.1bp)PH0171.1_Nkx2-1/Jaspar(0.659)
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motif file (matrix)
5 A G T C C G T A C G A T C G T A A C T G G T C A C G T A G T C A A C G T A T G C A C G T A G T C 1e-15-3.520e+019.82%0.19%47.7bp (61.0bp)PB0139.1_Irf5_2/Jaspar(0.602)
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motif file (matrix)
6 C G T A C T A G A C G T A C T G A C G T A C T G A G C T C G A T C G A T A C G T A C G T A G T C 1e-15-3.508e+019.82%0.19%52.9bp (53.9bp)KLF4/MA0039.3/Jaspar(0.624)
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motif file (matrix)
7 A C T G C G T A A C G T A C G T A C G T A C G T A G T C C G T A A C T G A G C T A C G T A C G T 1e-14-3.239e+015.36%0.01%66.0bp (58.6bp)ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer(0.763)
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motif file (matrix)
8 A G T C C G T A A C G T A C G T A C G T A C G T A C G T A G T C C G T A G T A C A C T G A C G T 1e-13-3.146e+015.36%0.01%62.9bp (75.3bp)PB0192.1_Tcfap2e_2/Jaspar(0.651)
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motif file (matrix)
9 * A C T G C G T A C G T A C G T A C G T A C G T A A C T G A C T G A C G T A C T G A C T G C G T A 1e-11-2.718e+014.46%0.01%53.1bp (64.1bp)PB0137.1_Irf3_2/Jaspar(0.663)
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motif file (matrix)
10 * A C G T T A G C C T G A G C A T T A C G A G C T C G A T T A G C A C G T C A T G A T G C A C G T 1e-11-2.635e+019.82%0.44%52.5bp (61.2bp)PB0141.1_Isgf3g_2/Jaspar(0.639)
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motif file (matrix)
11 * A C G T A C T G G T C A C T A G A C G T A T C G C G T A A C G T A C G T A C G T A G C T G T C A 1e-10-2.464e+016.25%0.10%58.6bp (56.4bp)BATF::JUN/MA0462.1/Jaspar(0.795)
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motif file (matrix)
12 * C G T A C G T A C T A G A C T G C T G A C G T A A G T C A G C T G C A T G T A C 1e-10-2.376e+0110.71%0.73%42.6bp (60.1bp)ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer(0.652)
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motif file (matrix)
13 * A G T C A C G T C T G A A G T C A T C G A G T C C G T A C T G A A C T G A G T C 1e-10-2.373e+014.46%0.02%26.7bp (42.3bp)NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer(0.675)
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motif file (matrix)
14 * G A T C C G T A C A T G G T A C A G C T A T G C A G C T T A C G C T A G A T C G G T A C G T A C 1e-9-2.297e+0112.50%1.20%57.0bp (62.9bp)MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer(0.661)
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motif file (matrix)
15 * C G T A A C T G C G T A A T C G A G C T A C G T A C T G A C T G A C T G C G T A 1e-9-2.132e+018.93%0.53%43.3bp (57.4bp)RBPJ/MA1116.1/Jaspar(0.646)
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motif file (matrix)
16 * C G T A A C T G A G T C A C G T A G T C A G T C C G T A C G T A A C T G C G A T C G T A C G T A 1e-9-2.108e+013.57%0.01%55.2bp (34.2bp)POL013.1_MED-1/Jaspar(0.597)
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motif file (matrix)
17 * A C T G C G T A C G T A A G T C A C G T A G T C A C G T C G T A A C T G C G T A C G T A A C T G 1e-8-2.003e+012.68%0.00%60.4bp (0.0bp)ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer(0.628)
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motif file (matrix)
18 * C G A T C G A T A C T G C G T A A T C G A G T C A G C T A G C T A C G T C G T A 1e-7-1.787e+0111.61%1.51%59.3bp (58.4bp)PB0049.1_Nr2f2_1/Jaspar(0.797)
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motif file (matrix)
19 * A C G T A G T C A G C T C G A T C T A G A G T C G C A T T A C G A G T C G T C A 1e-7-1.667e+0112.50%1.99%65.3bp (62.0bp)Zfp57(Zf)/H1-ZFP57.HA-ChIP-Seq(GSE115387)/Homer(0.664)
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motif file (matrix)
20 * C G T A C G A T A G T C G T A C C G T A A C G T C A G T A G T C A G T C A C G T 1e-6-1.589e+0110.71%1.48%51.6bp (71.6bp)TEAD1/MA0090.2/Jaspar(0.674)
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motif file (matrix)
21 * G C A T A C T G C A T G A C T G C G T A A C T G A C T G A T G C 1e-6-1.538e+0124.11%8.07%50.8bp (60.5bp)GLIS3(Zf)/Thyroid-Glis3.GFP-ChIP-Seq(GSE103297)/Homer(0.779)
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motif file (matrix)
22 * A C T G A G T C A C G T A C G T A C G T C G T A C G T A A G T C A C G T C G T A 1e-5-1.313e+012.68%0.02%33.1bp (56.5bp)HMBOX1/MA0895.1/Jaspar(0.756)
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motif file (matrix)
23 * C T G A T C G A C G T A G A T C C G T A A C T G G T C A A G T C C G T A A T C G 1e-5-1.311e+0110.71%1.93%58.8bp (69.6bp)Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer(0.741)
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motif file (matrix)
24 * A C T G A C G T A G T C A G T C A C G T A C T G A C T G A G T C A C G T A G T C C G A T A C T G 1e-4-1.093e+012.68%0.04%6.9bp (60.0bp)ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer(0.581)
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motif file (matrix)
25 * C G T A A C G T C G T A C A T G C G T A C G A T C G T A A T C G C G T A C A G T 1e-4-1.082e+018.93%1.67%24.5bp (83.1bp)PBX1/MA0070.1/Jaspar(0.713)
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motif file (matrix)
26 * A G T C A G T C A C G T C G A T C G T A C T A G C T A G A C G T 1e-4-1.047e+0125.00%11.10%55.6bp (60.8bp)PB0048.1_Nkx3-1_1/Jaspar(0.626)
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motif file (matrix)
27 * A G T C A C G T C G T A A G T C A C G T C G T A A G T C A C G T A G C T A T C G 1e-3-8.558e+007.14%1.40%65.5bp (61.7bp)ZKSCAN1(Zf)/HepG2-ZKSCAN1-ChIP-Seq(Encode)/Homer(0.651)
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motif file (matrix)
28 * A T C G A C T G A C T G A C T G A T C G C G T A A C G T A C T G 1e-1-4.126e+007.14%2.89%53.1bp (63.1bp)MZF1/MA0056.1/Jaspar(0.783)
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motif file (matrix)