Homer de novo Motif Results (wt_vs_input_motif/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
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More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 688
Total background sequences = 47000
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 C G T A C G T A A C T G A C T G A C G T A T C G A T C G C G T A C G T A C T G A G T A C A C G T 1e-20-4.646e+011.46%0.01%62.9bp (41.5bp)Tbx6(T-box)/ESC-Tbx6-ChIP-Seq(GSE93524)/Homer(0.698)
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motif file (matrix)
2 A G T C C G T A C G A T A C G T A C G T A C G T A C G T A G T C C G T A G T A C A C T G A C G T 1e-19-4.445e+011.16%0.00%52.2bp (0.0bp)PB0192.1_Tcfap2e_2/Jaspar(0.643)
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motif file (matrix)
3 A C G T A C G T A G C T A G T C A C G T A G T C A C T G G T A C A G T C C G T A A C G T C G T A 1e-18-4.359e+011.46%0.01%54.9bp (63.1bp)E2F8/MA0865.1/Jaspar(0.735)
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motif file (matrix)
4 G T C A A G T C C G A T A C T G C G A T C G T A A C T G C T A G C G T A T A G C T C G A A C G T 1e-17-4.137e+011.46%0.01%54.6bp (83.7bp)PB0181.1_Spdef_2/Jaspar(0.655)
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motif file (matrix)
5 C A T G A C G T C G T A A C T G G C T A G T C A C G T A C A G T C A T G C G A T G T A C G A T C 1e-16-3.891e+011.16%0.01%50.4bp (22.6bp)PB0137.1_Irf3_2/Jaspar(0.626)
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motif file (matrix)
6 A C T G A C G T A C T G A C G T C G T A A G C T A C G T A C G T A G T C A C G T A G T C C G T A 1e-15-3.568e+011.16%0.01%45.3bp (17.9bp)Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer(0.636)
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motif file (matrix)
7 A C G T A C G T A G C T A C G T A G T C G T A C C T A G A C G T A C T G C G T A A C G T A C G T 1e-14-3.451e+011.46%0.02%52.7bp (56.2bp)Gfi1/MA0038.1/Jaspar(0.687)
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motif file (matrix)
8 A C G T A G T C A C T G A C G T A G T C C G T A C G T A A C T G A C G T A C T G A C T G C G T A 1e-14-3.339e+011.16%0.01%58.0bp (50.9bp)NKX2-3/MA0672.1/Jaspar(0.743)
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motif file (matrix)
9 * A C T G C G T A C G T A C G T A C G T A A C G T A C G T A C G T C G T A A C T G 1e-10-2.333e+011.31%0.05%53.1bp (50.1bp)NFAT5/MA0606.1/Jaspar(0.607)
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motif file (matrix)
10 * A T G C A C T G G T A C T C G A A G T C C A G T C G T A G T A C 1e-7-1.698e+016.11%2.36%54.9bp (57.1bp)PB0091.1_Zbtb3_1/Jaspar(0.625)
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motif file (matrix)
11 * C T A G C T A G C T G A C T G A A T C G T C G A C A T G A T C G G A T C C G T A A T C G C G T A 1e-6-1.428e+014.22%1.46%54.9bp (73.0bp)SPIC/MA0687.1/Jaspar(0.608)
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motif file (matrix)
12 * C G A T C A T G C A T G G C A T C G A T T C A G C G T A C G A T C A G T T A C G 1e-5-1.224e+0116.01%10.45%51.8bp (56.0bp)Dux/MA0611.1/Jaspar(0.813)
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motif file (matrix)
13 * T A C G A C T G A T C G C A T G C T A G A T C G A C T G C A T G 1e-5-1.158e+015.24%2.34%55.9bp (53.1bp)ZNF740/MA0753.1/Jaspar(0.866)
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motif file (matrix)
14 * A C G T A C G T G C A T G T A C A G T C A C G T C G A T A C G T A G T C A G T C 1e-4-1.109e+013.06%1.03%50.2bp (68.4bp)PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer(0.752)
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motif file (matrix)
15 * A C T G A G T C C T A G A G T C C T G A A T G C C T A G A G T C 1e-4-1.069e+014.22%1.77%53.7bp (62.9bp)NRF1/MA0506.1/Jaspar(0.801)
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motif file (matrix)
16 * C A G T C T A G C A T G A T G C G A C T C T G A G C T A A G T C A C G T G T C A 1e-4-1.059e+013.64%1.41%61.9bp (56.3bp)HMBOX1/MA0895.1/Jaspar(0.697)
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motif file (matrix)
17 * C G T A A G T C C T G A G T A C A G T C C G T A A G T C C G T A 1e-4-9.467e+005.53%2.80%53.8bp (65.9bp)RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer(0.824)
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motif file (matrix)
18 * C G T A A C T G A C T G A C T G A C T G A G T C A C G T A C T G A G T C A C G T A G T C A C G T 1e-3-9.151e+000.29%0.00%55.2bp (0.0bp)PB0110.1_Bcl6b_2/Jaspar(0.601)
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motif file (matrix)
19 * A C G T A G T C A G T C C G T A A G T C A C G T A G T C A G T C G T C A A G C T A G C T A G T C 1e-3-8.435e+000.73%0.08%54.6bp (49.1bp)TEAD1(TEAD)/HepG2-TEAD1-ChIP-Seq(Encode)/Homer(0.657)
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motif file (matrix)
20 * A C T G G T C A A T G C C G T A A C G T A C G T C G T A A T G C 1e-3-8.345e+008.73%5.42%56.8bp (57.4bp)BARX1/MA0875.1/Jaspar(0.791)
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motif file (matrix)
21 * C T G A A T G C A C G T T G C A T C G A C T A G C T G A C G T A G T C A A T C G 1e-3-8.185e+009.17%5.80%56.2bp (68.0bp)SOX10/MA0442.2/Jaspar(0.615)
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motif file (matrix)
22 * C G T A A G T C A G T C A G T C C G T A A C T G A G T C C G T A A G T C A G T C A C G T A C T G 1e-3-7.774e+000.29%0.00%52.5bp (49.6bp)TCF3/MA0522.2/Jaspar(0.724)
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motif file (matrix)
23 * C G A T A C T G A C G T T G A C C G A T G T C A A T C G G C T A A C T G C A G T 1e-3-7.618e+000.87%0.14%34.6bp (58.8bp)Smad4/MA1153.1/Jaspar(0.782)
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motif file (matrix)
24 * A G C T C G A T A G C T A C G T A C T G A G T C A C T G C G A T 1e-2-6.890e+001.60%0.51%57.2bp (50.4bp)Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer(0.740)
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motif file (matrix)
25 * A C G T A C G T G T C A A T G C C G T A A C T G C G T A A G T C A C T G A C G T 1e-2-6.762e+000.87%0.17%53.2bp (55.1bp)ZBTB18/MA0698.1/Jaspar(0.704)
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motif file (matrix)
26 * A C T G C G T A A T G C C G T A A T C G C G T A T A G C C G T A A T G C C G T A A T G C C G T A 1e-2-6.332e+003.49%1.79%56.1bp (82.7bp)SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar(0.629)
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motif file (matrix)
27 * A G C T A G T C A G C T A G C T A G T C A C G T G A T C A C G T T G A C C G A T 1e-2-5.751e+0012.37%9.18%60.7bp (86.8bp)Gata1/MA0035.3/Jaspar(0.738)
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motif file (matrix)
28 * A G T C A C G T A C T G A T G C A G T C A C G T A G T C A C G T A G T C A C G T A C T G A G T C 1e-2-5.192e+000.44%0.05%50.4bp (93.6bp)ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer(0.708)
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motif file (matrix)
29 * A C T G A G T C A C G T G T A C T A G C A C G T C G T A A C T G A G T C A C G T 1e-2-4.865e+000.73%0.18%34.5bp (61.1bp)POL010.1_DCE_S_III/Jaspar(0.599)
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motif file (matrix)
30 * C G T A A G T C A C G T C G T A A G T C A G T C A C G T A G T C C G T A A C G T C G T A A C G T 1e-1-4.231e+000.15%0.00%50.0bp (0.0bp)ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer(0.658)
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motif file (matrix)
31 * A C G T A C T G A C G T A C G T A C T G A C G T A G T C A G T C C G T A A C G T A C T G A C G T 1e-1-3.545e+000.15%0.01%41.2bp (30.3bp)PH0085.1_Irx4/Jaspar(0.638)
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motif file (matrix)
32 * A G T C G C A T A G T C A G T C C A G T A G T C T A G C A C G T 1e-1-3.487e+004.08%2.78%59.3bp (77.0bp)ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer(0.637)
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motif file (matrix)