Homer de novo Motif Results (atac_ko_open_motif/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
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More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 716
Total background sequences = 49857
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 A G T C T G C A A G C T A G T C G A C T A T C G C G T A C G A T A C G T A C T G A C T G G A C T 1e-106-2.449e+026.01%0.01%49.1bp (13.6bp)NFYA/MA0060.3/Jaspar(0.836)
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motif file (matrix)
2 A G T C A G T C C G T A T A C G G A T C C G T A A C T G C T A G A C T G A C T G A T C G G T A C 1e-96-2.217e+0215.50%0.91%41.5bp (60.3bp)BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer(0.928)
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motif file (matrix)
3 A G T C C T G A A C G T A C G T C G T A C G T A A G T C C G T A A C G T C T G A A G T C A G T C 1e-96-2.212e+025.87%0.01%48.5bp (0.0bp)Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer(0.718)
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motif file (matrix)
4 C T A G C G T A C T A G A G T C A G T C A C G T G T A C C G T A A G C T A C G T C G T A A C G T 1e-69-1.602e+024.47%0.01%58.7bp (46.4bp)PH0152.1_Pou6f1_2/Jaspar(0.807)
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motif file (matrix)
5 A G T C G C A T A G T C C G T A A G T C C G T A A C T G C G T A C G T A A G T C A G T C A C G T 1e-62-1.442e+025.17%0.04%46.1bp (52.3bp)PB0050.1_Osr1_1/Jaspar(0.546)
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motif file (matrix)
6 C G T A C T G A C T A G A G T C A G T C G T C A A G T C C T A G A G T C A G T C 1e-52-1.199e+0221.23%4.90%51.6bp (55.9bp)KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer(0.797)
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motif file (matrix)
7 A C T G A C T G A C G T A C G T C G T A A C G T C T G A A G T C A C G T A G T C 1e-49-1.139e+024.19%0.04%59.5bp (63.4bp)PB0174.1_Sox30_2/Jaspar(0.595)
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motif file (matrix)
8 T A C G A C G T C G T A A G T C T A G C C G A T A G T C T C G A T A G C G T C A 1e-48-1.123e+025.45%0.13%52.0bp (60.9bp)GLI2/MA0734.1/Jaspar(0.547)
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motif file (matrix)
9 C T G A C G T A C G T A C G T A C G T A C T G A A G T C A C G T A G C T A C G T G T C A A G T C 1e-40-9.374e+012.37%0.00%63.5bp (33.3bp)PB0141.1_Isgf3g_2/Jaspar(0.621)
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motif file (matrix)
10 A C T G C G T A A G T C C G T A A G T C A C G T A T C G A G T C A G T C A G C T A C T G A C T G 1e-35-8.160e+013.35%0.05%58.6bp (69.2bp)ELF4/MA0641.1/Jaspar(0.601)
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motif file (matrix)
11 A G T C C G T A A G T C C G T A A C G T A C G T A C T G A C T G A C G T A C G T A C T G A C G T 1e-30-7.077e+011.68%0.00%71.3bp (8.2bp)NFY(CCAAT)/Promoter/Homer(0.650)
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motif file (matrix)
12 C T A G G T C A C G A T A G T C A G C T T C A G C T A G A G C T C T A G G T A C 1e-29-6.872e+016.42%0.64%49.2bp (58.3bp)ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer(0.604)
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motif file (matrix)
13 T C A G A G C T A T G C A C G T A G T C C G T A A G T C C G T A 1e-28-6.552e+016.84%0.81%54.6bp (63.4bp)MGA/MA0801.1/Jaspar(0.684)
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motif file (matrix)
14 A C G T C G T A A C T G A C T G A G T C A G T C A C G T C G T A A C T G A C T G C G T A A C T G 1e-28-6.525e+012.23%0.02%66.4bp (47.0bp)ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer(0.763)
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motif file (matrix)
15 A C G T A C G T A C G T A G C T C G A T T A C G A G T C T A C G C G T A C G T A 1e-26-6.119e+013.21%0.10%63.4bp (56.5bp)HOXD12/MA0873.1/Jaspar(0.705)
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motif file (matrix)
16 A T G C G T C A A G C T A C T G C G T A T A G C C G A T A G T C C T G A A C T G A G T C G T C A 1e-25-5.850e+013.21%0.11%51.4bp (49.7bp)Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer(0.946)
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motif file (matrix)
17 C G T A A C G T A C T G A G T C C T G A A T G C A C G T C G T A 1e-19-4.398e+015.03%0.68%64.1bp (64.2bp)Ddit3::Cebpa/MA0019.1/Jaspar(0.702)
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motif file (matrix)
18 A G T C C G T A A C G T A C T G A C G T A C G T A G T C A G T C 1e-18-4.243e+014.75%0.63%54.7bp (58.9bp)AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer(0.721)
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motif file (matrix)
19 C A T G T C A G A G T C C T A G A C G T A C T G C T A G A G C T 1e-16-3.835e+0114.66%5.92%55.5bp (59.2bp)POL006.1_BREu/Jaspar(0.792)
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motif file (matrix)
20 C G T A C G T A A C T G C G T A A G T C C T G A A C T G A G T C A C G T C G T A 1e-12-2.806e+013.07%0.41%54.4bp (64.5bp)PH0169.1_Tgif1/Jaspar(0.693)
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motif file (matrix)
21 * C G A T G C T A C G T A C T G A C G T A C G T A C G T A C G T A G T C A C G T A C G T A G C A T 1e-10-2.519e+017.82%2.79%49.9bp (53.1bp)ZNF384/MA1125.1/Jaspar(0.841)
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motif file (matrix)
22 * C G T A A G T C A C G T C T A G A C T G A C T G C G T A A G T C A G T C A C G T A G T C C G T A 1e-8-2.046e+010.70%0.01%58.0bp (18.1bp)PB0004.1_Atf1_1/Jaspar(0.588)
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motif file (matrix)
23 * C G T A A C T G C G T A A T C G A C T G A G T C A C T G C G A T 1e-8-2.009e+012.79%0.51%64.1bp (67.4bp)PB0180.1_Sp4_2/Jaspar(0.701)
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motif file (matrix)
24 * A G T C C G T A C T A G A G C T A C T G A C G T C T G A A G T C 1e-8-1.976e+013.21%0.69%42.7bp (70.8bp)SOX13/MA1120.1/Jaspar(0.675)
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motif file (matrix)
25 * G A C T T G C A A G T C C G A T T A G C A G T C A G C T T G A C A G T C A G C T A T G C G A T C 1e-8-1.909e+014.89%1.55%52.4bp (61.9bp)ZNF263/MA0528.1/Jaspar(0.705)
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motif file (matrix)
26 * C G T A A G T C A G T C C G T A A G T C C T G A A C G T A C T G 1e-8-1.895e+0110.34%5.01%51.5bp (61.4bp)MF0007.1_bHLH(zip)_class/Jaspar(0.909)
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motif file (matrix)
27 * A G C T G T C A A T G C A G C T A G T C A G T C G T C A T C G A A G T C C G T A 1e-4-1.131e+011.40%0.24%47.1bp (60.5bp)WT1(Zf)/Kidney-WT1-ChIP-Seq(GSE90016)/Homer(0.655)
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motif file (matrix)
28 * C G A T A C T G A C G T A G T C A C G T A G T C A G T C C T A G A G T C A G T C A G T C C G T A 1e-4-9.971e+000.56%0.03%55.2bp (66.3bp)Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer(0.727)
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motif file (matrix)
29 * C G T A A C T G C G T A A C T G C G T A A G T C C G T A C G T A C T A G A C G T A C G T C G T A 1e-3-9.151e+000.28%0.00%53.1bp (0.0bp)Mecom/MA0029.1/Jaspar(0.670)
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motif file (matrix)
30 * A C T G A G T C A G T C A G T C A C G T A G T C A G T C G T A C A G T C A C G T A C G T A C G T 1e-3-6.973e+000.28%0.01%49.9bp (23.7bp)PB0110.1_Bcl6b_2/Jaspar(0.673)
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motif file (matrix)
31 * A C G T A C G T C G T A A C T G A C T G T A C G A C G T A C G T C G T A A C T G 1e-1-4.415e+000.42%0.07%49.8bp (71.7bp)CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer(0.665)
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motif file (matrix)