Homer de novo Motif Results (atac_wt_open_motif/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
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More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 6581
Total background sequences = 43035
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 G C T A A C T G G C T A A C G T C G T A C T G A T A C G T C G A 1e-521-1.200e+0325.95%6.66%50.8bp (61.6bp)GATA3/MA0037.3/Jaspar(0.988)
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motif file (matrix)
2 T C A G G T A C A G T C G T C A G A T C C G T A G A T C T A G C G A T C G C T A 1e-185-4.282e+0218.14%7.23%50.4bp (57.3bp)Klf1/MA0493.1/Jaspar(0.916)
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motif file (matrix)
3 A G C T A C G T C T A G T A C G C G T A C T A G C G A T C G T A C A T G C T A G A G C T A T C G 1e-58-1.352e+021.66%0.21%47.3bp (54.6bp)Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer(0.620)
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motif file (matrix)
4 C A T G C A G T A C T G C T G A A C G T A C T G C T A G A G C T A G C T A C G T A C T G A C G T 1e-58-1.347e+021.11%0.07%61.7bp (59.5bp)Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer(0.654)
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motif file (matrix)
5 G C A T T C A G G T A C G A C T C A T G C G T A A T C G A C G T G T A C C G T A 1e-40-9.362e+014.57%1.91%51.6bp (58.6bp)Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer(0.963)
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motif file (matrix)
6 C A T G A G T C A G T C C G A T C T A G A C T G C T G A C G T A A C T G A G C T T G A C C G T A 1e-40-9.310e+011.09%0.13%53.1bp (52.2bp)Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer(0.649)
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motif file (matrix)
7 G A C T A G T C A C G T A C G T G T A C A G T C C G T A A T G C A G C T C G T A A C T G A G T C 1e-37-8.687e+010.70%0.04%58.0bp (48.9bp)NFATC2/MA0152.1/Jaspar(0.634)
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motif file (matrix)
8 A G T C A C G T A G T C T C G A A G T C A G T C A G T C A C G T C G T A A T C G A C G T A C G T 1e-36-8.299e+010.52%0.02%49.5bp (32.2bp)SREBF1/MA0595.1/Jaspar(0.633)
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motif file (matrix)
9 T A C G C T G A C T A G A G T C A G T C C G T A C T G A A C G T T G A C C G T A A C T G T G C A 1e-33-7.828e+015.35%2.61%53.9bp (58.0bp)NFYA/MA0060.3/Jaspar(0.958)
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motif file (matrix)
10 A C G T C G T A A C G T A G T C A G T C A C G T A C G T C T A G A C T G T C G A A G T C A G T C 1e-30-6.980e+010.52%0.03%49.5bp (49.5bp)SD0003.1_at_AC_acceptor/Jaspar(0.681)
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motif file (matrix)
11 T C A G A G T C C T G A C T G A C T A G C G T A A C G T A C T G A C T G G T A C T A C G A T C G 1e-29-6.871e+013.16%1.28%51.7bp (55.4bp)YY1/MA0095.2/Jaspar(0.925)
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motif file (matrix)
12 A C T G T A C G T A G C A G C T C T A G C G A T A C T G T C A G A G C T T G A C C T G A T C A G 1e-27-6.372e+0147.87%41.16%54.4bp (57.9bp)RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer(0.679)
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motif file (matrix)
13 T A G C A T G C A C T G C T A G G T C A C G T A C T A G G A C T T C A G T C A G 1e-27-6.232e+014.71%2.39%52.2bp (52.4bp)Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer(0.963)
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motif file (matrix)
14 C G T A A C G T C G T A G T C A A C T G C G T A A C G T A G T C A T G C A C G T 1e-26-6.203e+010.55%0.04%47.6bp (80.3bp)PB0181.1_Spdef_2/Jaspar(0.688)
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motif file (matrix)
15 G A C T G A T C G C T A A G T C A G T C G T A C C T G A T C G A C G T A C A T G A C T G A T G C 1e-24-5.536e+010.49%0.04%65.2bp (56.4bp)RARA(var.2)/MA0730.1/Jaspar(0.596)
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motif file (matrix)
16 A G T C A C G T A C G T A C T G A C G T A C G T A T C G A C T G C G T A C T G A 1e-23-5.454e+011.29%0.34%39.1bp (56.0bp)STAT3/MA0144.2/Jaspar(0.692)
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motif file (matrix)
17 A C T G C G T A C T A G C G T A A G T C C G T A A C G T A C T G A G T C C G T A C T G A C G T A 1e-22-5.088e+010.27%0.01%49.6bp (22.0bp)POU5F1/MA1115.1/Jaspar(0.766)
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motif file (matrix)
18 G C A T T G A C C T A G T A G C A T C G G C T A T C A G C G T A A G C T C G A T 1e-19-4.430e+010.79%0.16%51.9bp (51.6bp)GFX(?)/Promoter/Homer(0.839)
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motif file (matrix)
19 A C G T A C G T A C T G A C G T C G T A A C G T C G T A A C G T 1e-17-4.129e+011.34%0.45%58.3bp (70.4bp)Foxq1/MA0040.1/Jaspar(0.741)
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motif file (matrix)
20 A C T G A C G T A C G T G T C A G A T C A C G T T A C G C G T A A T C G C T G A C T A G C T G A 1e-16-3.831e+010.17%0.00%50.0bp (0.0bp)PB0140.1_Irf6_2/Jaspar(0.643)
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motif file (matrix)
21 G C A T C T A G T G A C C T A G T G A C G T C A C A G T C A T G G A T C C A T G 1e-13-3.065e+011.85%0.87%54.6bp (53.5bp)NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer(0.892)
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motif file (matrix)
22 A C G T A C T G C G T A A T C G A C T G A C G T C G T A A G T C A C G T A C T G 1e-12-2.864e+010.27%0.03%55.1bp (66.3bp)PB0051.1_Osr2_1/Jaspar(0.632)
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motif file (matrix)
23 A C T G A G C T A C G T A C T G A G T C A G T C C A G T A C T G 1e-12-2.829e+017.19%5.13%56.0bp (59.2bp)SD0002.1_at_AC_acceptor/Jaspar(0.694)
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motif file (matrix)
24 * G A C T A T G C G C T A A C G T C G T A G T A C A T C G T G C A T G A C A C G T 1e-9-2.276e+014.73%3.25%57.8bp (60.9bp)PB0136.1_IRC900814_2/Jaspar(0.652)
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motif file (matrix)
25 * A C T G G T A C A G T C A G T C A C G T A T C G A G T C A G T C A T C G A C G T 1e-9-2.108e+011.20%0.56%53.0bp (56.6bp)Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer(0.612)
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motif file (matrix)
26 * A G C T A G T C C G A T C G T A C G A T A C T G A G T C A C G T G T C A A C G T C G T A A C T G 1e-8-2.036e+010.12%0.01%51.0bp (75.4bp)POU3F4/MA0789.1/Jaspar(0.570)
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motif file (matrix)
27 * C G A T A T C G T C A G A C T G A G C T G C A T C T A G C T A G A C T G A G T C 1e-8-2.026e+012.37%1.42%57.0bp (57.7bp)Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer(0.740)
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motif file (matrix)
28 * A G T C C G T A A G T C C T A G A C G T A C T G C G T A A G T C 1e-8-1.912e+012.93%1.89%57.1bp (55.9bp)Arntl/MA0603.1/Jaspar(0.972)
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motif file (matrix)
29 * G A T C A C G T A C T G G T C A A C G T C T G A G C T A A C G T A C T G A T C G C G T A T A G C 1e-7-1.678e+010.56%0.20%62.1bp (37.1bp)Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer(0.640)
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motif file (matrix)
30 * C G T A C G T A C T G A C T G A G C T A C T G A C T G A C T G A C G T A C G T A T G C A T G C A 1e-4-1.134e+012.25%1.56%54.2bp (52.4bp)PB0182.1_Srf_2/Jaspar(0.919)
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motif file (matrix)