Homer de novo Motif Results (lps_bci_vs_input_motif/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 1201
Total background sequences = 48220
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A 1e-23-5.398e+0115.49%6.97%84.8bp (67.2bp)PB0182.1_Srf_2/Jaspar(0.838)
More Information | Similar Motifs Found
motif file (matrix)
2 A C G T C G T A A C T G G A T C A G C T C T A G C T G A C T G A G T A C T G C A A G C T C T G A 1e-19-4.547e+0117.74%9.18%44.5bp (64.3bp)Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer(0.570)
More Information | Similar Motifs Found
motif file (matrix)
3 C G A T T C A G C G T A C A T G A T C G A G T C G T C A A T G C C T A G C T G A 1e-19-4.479e+0117.32%8.92%44.9bp (62.1bp)Zac1(Zf)/Neuro2A-Plagl1-ChIP-Seq(GSE75942)/Homer(0.664)
More Information | Similar Motifs Found
motif file (matrix)
4 T G C A A G C T G C T A T C A G T G A C C A G T G A C T C A T G C G T A C G T A G A T C G T A C 1e-17-3.964e+0116.82%8.98%40.8bp (60.2bp)VDR/MA0693.2/Jaspar(0.647)
More Information | Similar Motifs Found
motif file (matrix)
5 A G C T A G T C A G T C A G T C C T A G A C T G A C T G A C G T A G C T T G A C 1e-16-3.873e+0112.32%5.80%38.4bp (57.7bp)ELF1/MA0473.2/Jaspar(0.665)
More Information | Similar Motifs Found
motif file (matrix)
6 A G T C C T A G C G A T A C T G A C T G A C G T C T A G A C T G A G T C C T G A 1e-15-3.553e+0112.99%6.51%49.7bp (65.6bp)GLI2/MA0734.1/Jaspar(0.682)
More Information | Similar Motifs Found
motif file (matrix)
7 A C T G A C G T C G T A A G T C A C T G A C G T A G C T C T G A C G T A A C G T C G T A A C G T 1e-14-3.441e+010.58%0.00%49.9bp (5.7bp)FOXB1/MA0845.1/Jaspar(0.680)
More Information | Similar Motifs Found
motif file (matrix)
8 C G T A C T G A G T C A T G C A A G T C G T C A A G T C C T G A C T G A C G T A 1e-14-3.370e+0114.65%7.88%58.2bp (65.8bp)RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer(0.721)
More Information | Similar Motifs Found
motif file (matrix)
9 A C G T A G T C A G T C C G T A A G T C A G C T C G A T C G T A 1e-13-3.202e+0114.99%8.28%61.0bp (63.4bp)PB0048.1_Nkx3-1_1/Jaspar(0.821)
More Information | Similar Motifs Found
motif file (matrix)
10 A C T G A G C T C T G A T G A C A G T C C G A T T C A G A C G T C G T A C T A G 1e-13-3.194e+0113.99%7.53%45.6bp (64.3bp)PB0089.1_Tcfe2a_1/Jaspar(0.669)
More Information | Similar Motifs Found
motif file (matrix)
11 C T A G A C G T C G A T C G A T C T A G G T A C G T A C C T A G A C G T C A T G 1e-13-3.164e+0125.48%16.79%49.2bp (63.2bp)Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer(0.756)
More Information | Similar Motifs Found
motif file (matrix)
12 A C T G A C G T T C G A A C G T T A G C C A G T C T G A G T A C C G A T T G A C 1e-13-3.120e+0110.24%4.89%61.8bp (62.4bp)DMRT3/MA0610.1/Jaspar(0.637)
More Information | Similar Motifs Found
motif file (matrix)
13 A C G T A C G T A C G T C G T A A C G T A C T G A G C T G T C A A G T C T C G A A C T G A C G T 1e-12-2.877e+010.50%0.00%58.0bp (0.0bp)NFIL3/MA0025.1/Jaspar(0.645)
More Information | Similar Motifs Found
motif file (matrix)
14 A G T C G T C A A C T G A C T G G T A C C T G A A T G C T A G C G A T C C T A G A T G C A G T C 1e-12-2.801e+014.50%1.44%38.8bp (64.5bp)HES7/MA0822.1/Jaspar(0.717)
More Information | Similar Motifs Found
motif file (matrix)
15 * A C G T C A T G C G T A C T A G A G T C A G T C C T G A C G T A 1e-11-2.705e+0120.32%13.07%50.6bp (60.4bp)RHOXF1/MA0719.1/Jaspar(0.645)
More Information | Similar Motifs Found
motif file (matrix)
16 * C T G A A T C G G T A C G A C T T A C G T C G A T C A G G T C A G C A T T A G C 1e-11-2.612e+0114.24%8.28%48.9bp (59.8bp)Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer(0.667)
More Information | Similar Motifs Found
motif file (matrix)
17 * A C T G A C T G A G T C C T A G A C T G C G T A A C T G A T C G C G A T A G C T 1e-10-2.532e+019.99%5.17%48.9bp (61.1bp)HINFP/MA0131.2/Jaspar(0.689)
More Information | Similar Motifs Found
motif file (matrix)
18 * C T A G C T G A C A T G C T G A G T A C C G T A T C A G C T G A C T A G C G T A A C G T C G A T 1e-10-2.512e+0110.32%5.42%61.4bp (62.4bp)ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer(0.593)
More Information | Similar Motifs Found
motif file (matrix)
19 * A T C G G C A T A C T G T G C A G T C A G C T A T G A C A T G C A G T C A T G C 1e-10-2.508e+0114.24%8.40%62.9bp (61.6bp)IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer(0.783)
More Information | Similar Motifs Found
motif file (matrix)
20 * C G T A A C G T G C T A A C T G A G T C C G T A C G T A A C T G A T G C C G T A C G T A A C G T 1e-10-2.328e+010.42%0.00%58.9bp (0.0bp)Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer(0.627)
More Information | Similar Motifs Found
motif file (matrix)
21 * T A G C G A C T G A T C G A T C C G T A C T A G T A C G T G A C C G A T C T A G A C T G C T G A 1e-9-2.229e+0113.66%8.25%62.7bp (64.4bp)Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer(0.597)
More Information | Similar Motifs Found
motif file (matrix)
22 * A G T C A G T C C T A G G T C A C T G A A C T G A C G T C G T A C G A T A T C G G C A T C G T A 1e-9-2.222e+010.50%0.01%57.9bp (44.0bp)ELF3/MA0640.1/Jaspar(0.571)
More Information | Similar Motifs Found
motif file (matrix)
23 * C T G A A C G T A C T G T C G A C T G A C G T A A C G T A T C G C T G A C G T A G C T A C A G T 1e-9-2.106e+011.33%0.17%63.4bp (53.4bp)Hoxa10(Homeobox)/ChickenMSG-Hoxa10.Flag-ChIP-Seq(GSE86088)/Homer(0.708)
More Information | Similar Motifs Found
motif file (matrix)
24 * A T G C G T A C C G T A C T G A A G C T G T C A T C A G G A C T 1e-8-1.979e+0111.91%7.15%50.6bp (61.9bp)HOXA5/MA0158.1/Jaspar(0.666)
More Information | Similar Motifs Found
motif file (matrix)
25 * A T C G C G T A G C A T A G T C T C A G A G T C C T A G G T A C 1e-8-1.856e+018.58%4.73%52.4bp (60.6bp)PAX5/MA0014.3/Jaspar(0.627)
More Information | Similar Motifs Found
motif file (matrix)
26 * C T A G A C T G A T C G C G T A C T A G C T A G A G C T A T C G 1e-7-1.800e+0114.32%9.32%46.8bp (59.7bp)Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer(0.812)
More Information | Similar Motifs Found
motif file (matrix)
27 * A C G T A T G C A G T C T C G A A G C T A C G T A G T C G A T C T C G A G A C T A C G T A G T C 1e-6-1.522e+010.33%0.01%51.9bp (14.5bp)TEAD1(TEAD)/HepG2-TEAD1-ChIP-Seq(Encode)/Homer(0.691)
More Information | Similar Motifs Found
motif file (matrix)
28 * A G T C C T G A A G T C C T G A A G T C C T G A A G T C G T C A A G T C C T G A A G T C C T G A 1e-4-1.086e+014.33%2.31%71.0bp (73.6bp)PB0130.1_Gm397_2/Jaspar(0.716)
More Information | Similar Motifs Found
motif file (matrix)
29 * G T C A G T C A A C T G C T G A C G T A A C T G A G T C C G T A A C T G C G T A C G T A C T A G 1e-4-9.916e+001.08%0.28%47.2bp (52.5bp)SPI1/MA0080.4/Jaspar(0.655)
More Information | Similar Motifs Found
motif file (matrix)
30 * A T G C A T G C A C T G A C G T C T G A A G T C A C G T A C G T 1e-4-9.224e+002.58%1.21%57.4bp (55.7bp)PB0152.1_Nkx3-1_2/Jaspar(0.689)
More Information | Similar Motifs Found
motif file (matrix)
31 * C G T A A G C T C G T A C G T A A G T C A G T C C G T A A G T C A C T G A T C G A G T C C G T A 1e-3-8.095e+000.17%0.00%43.7bp (0.0bp)RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer(0.676)
More Information | Similar Motifs Found
motif file (matrix)
32 * C A T G A C T G C G T A A G T C A G C T C G T A A G C T C G T A C G T A A G T C 1e-3-6.930e+000.67%0.16%50.1bp (53.9bp)PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer(0.682)
More Information | Similar Motifs Found
motif file (matrix)
33 * C G T A A G T C C G T A A C T G C G T A C G T A A G T C C G T A A C T G C G T A C G T A A G T C 1e-2-5.372e+000.17%0.01%16.8bp (39.5bp)PB0121.1_Foxj3_2/Jaspar(0.625)
More Information | Similar Motifs Found
motif file (matrix)
34 * A C G T A G T C A G T C A C G T A C G T G T A C A G T C A C T G A G C T A G T C 1e-2-5.159e+001.25%0.59%54.0bp (50.3bp)EWSR1-FLI1/MA0149.1/Jaspar(0.718)
More Information | Similar Motifs Found
motif file (matrix)
35 * A C T G A C T G C G T A A C G T A C T G C G T A A G T C A C T G A G T C C G T A 1e-1-3.705e+000.08%0.00%55.2bp (29.0bp)JUN::JUNB/MA1132.1/Jaspar(0.828)
More Information | Similar Motifs Found
motif file (matrix)
36 * C T A G C T A G A C T G C T A G A C T G A C T G A C T G A C T G C T A G C T A G C T A G C T A G 1e-1-3.506e+0016.40%14.43%52.0bp (54.2bp)PB0097.1_Zfp281_1/Jaspar(0.913)
More Information | Similar Motifs Found
motif file (matrix)
37 * C G T A A G T C A C T G A T G C A G T C C G T A C G A T C G T A 1e-1-2.396e+000.67%0.38%50.4bp (60.0bp)Crem/MA0609.1/Jaspar(0.737)
More Information | Similar Motifs Found
motif file (matrix)