Homer de novo Motif Results (poly_vs_input_motif/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 1286
Total background sequences = 48466
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 A G T C A G C T A C T G A C G T C G T A A G T C C G T A A C G T C G T A C G T A C G T A C G T A 1e-17-3.967e+010.62%0.00%53.1bp (10.6bp)NFIL3/MA0025.1/Jaspar(0.618)
More Information | Similar Motifs Found
motif file (matrix)
2 A C G T G T C A C G T A A C G T C G A T A C G T C T A G C T A G A C G T C G T A C G T A A G T C 1e-13-3.013e+011.01%0.05%47.2bp (51.6bp)Phox2b/MA0681.1/Jaspar(0.699)
More Information | Similar Motifs Found
motif file (matrix)
3 C G A T C G T A C G T A G T C A C G A T C G A T C T G A A C G T T G A C C G T A 1e-12-2.970e+017.93%3.54%55.2bp (59.7bp)PB0176.1_Sox5_2/Jaspar(0.686)
More Information | Similar Motifs Found
motif file (matrix)
4 * A C G T C G T A C G T A C G T A A C G T A C G T G T A C C A T G C T G A A C G T A C T G A G T C 1e-11-2.632e+010.54%0.01%44.2bp (60.6bp)PB0171.1_Sox18_2/Jaspar(0.690)
More Information | Similar Motifs Found
motif file (matrix)
5 * T C A G A G T C G C A T A C T G C G T A C T G A C T A G T G A C C G T A C T G A 1e-10-2.475e+012.33%0.51%54.4bp (54.6bp)POL008.1_DCE_S_I/Jaspar(0.690)
More Information | Similar Motifs Found
motif file (matrix)
6 * A G T C G T A C G T C A C T A G C G T A C T G A C G A T C G T A C T A G A T G C G C A T C A T G 1e-10-2.461e+014.35%1.56%56.8bp (62.2bp)MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer(0.679)
More Information | Similar Motifs Found
motif file (matrix)
7 * C T G A C G T A A C G T C A G T G C T A G T C A C T G A G A T C C T G A A C T G G T C A C T G A 1e-10-2.443e+015.60%2.32%53.1bp (59.8bp)Arid3a/MA0151.1/Jaspar(0.698)
More Information | Similar Motifs Found
motif file (matrix)
8 * G T C A C T G A T C G A T G C A C T G A C A G T C T A G G T A C G T C A C G T A A C T G G T C A 1e-10-2.419e+0111.12%6.23%53.5bp (60.2bp)PB0146.1_Mafk_2/Jaspar(0.828)
More Information | Similar Motifs Found
motif file (matrix)
9 * A C T G T C A G A T G C G C T A A G C T A C G T G C A T T G C A T G C A G T A C 1e-10-2.367e+016.14%2.72%56.7bp (58.3bp)ISL2/MA0914.1/Jaspar(0.696)
More Information | Similar Motifs Found
motif file (matrix)
10 * A C G T G C A T C G A T T G C A G A T C A T C G C A T G G T A C G C T A C G A T 1e-10-2.340e+011.40%0.18%49.4bp (58.6bp)GCM1/MA0646.1/Jaspar(0.696)
More Information | Similar Motifs Found
motif file (matrix)
11 * G T A C A G T C A C G T C T G A C T A G A T C G A T G C G C A T G T A C C T G A 1e-9-2.272e+014.35%1.64%57.6bp (60.2bp)Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer(0.535)
More Information | Similar Motifs Found
motif file (matrix)
12 * A T C G C A G T C G A T A C T G T G C A A G T C G T A C G A T C C T G A T C A G 1e-9-2.229e+015.29%2.24%58.8bp (57.3bp)RORA(var.2)/MA0072.1/Jaspar(0.719)
More Information | Similar Motifs Found
motif file (matrix)
13 * C G T A C G T A G C T A G A C T C G T A G C A T C G A T C A T G A G T C G T A C 1e-9-2.183e+0122.86%16.18%54.4bp (60.5bp)Arid5a/MA0602.1/Jaspar(0.795)
More Information | Similar Motifs Found
motif file (matrix)
14 * G T C A A G C T T A G C C G T A C T A G A C G T C G T A C G T A C G A T C G T A G T A C A C G T 1e-8-2.062e+011.01%0.10%50.9bp (61.8bp)PH0150.1_Pou4f3/Jaspar(0.668)
More Information | Similar Motifs Found
motif file (matrix)
15 * A C G T A C G T G T A C C G T A A G T C A G T C A C G T A G T C C G T A A G C T A C G T A C G T 1e-8-2.048e+010.54%0.02%43.6bp (46.2bp)SREBF1/MA0595.1/Jaspar(0.676)
More Information | Similar Motifs Found
motif file (matrix)
16 * T G C A C G T A A T C G C G T A C T G A C G T A C G A T C G T A A G C T T A G C A C G T G C T A 1e-8-2.025e+012.57%0.74%49.5bp (56.4bp)PB0126.1_Gata5_2/Jaspar(0.616)
More Information | Similar Motifs Found
motif file (matrix)
17 * C G T A T C G A C G A T C T G A A C T G A C G T C G T A A C G T A C G T A C T G C T A G C G T A 1e-8-1.957e+010.54%0.02%64.0bp (59.5bp)PB0197.1_Zfp105_2/Jaspar(0.731)
More Information | Similar Motifs Found
motif file (matrix)
18 * A G T C C G T A A C G T A C G T G T A C A C G T A C G T T A G C A C G T A C T G A C T G G C T A 1e-8-1.923e+010.93%0.09%49.3bp (58.1bp)Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer(0.634)
More Information | Similar Motifs Found
motif file (matrix)
19 * T A C G G C A T A C G T G C A T A T C G T G C A C A G T T A C G A G C T G T A C 1e-7-1.841e+011.63%0.35%57.3bp (62.2bp)Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer(0.761)
More Information | Similar Motifs Found
motif file (matrix)
20 * A C G T C G T A C T A G T A G C A G T C G A C T C T G A A C G T T G C A C T G A 1e-7-1.696e+012.02%0.56%50.8bp (56.5bp)POL004.1_CCAAT-box/Jaspar(0.643)
More Information | Similar Motifs Found
motif file (matrix)
21 * T A G C G A C T T G A C G A T C G C A T C T G A G C A T T A G C G A C T G A T C 1e-7-1.675e+012.26%0.69%53.2bp (58.1bp)GATA6/MA1104.1/Jaspar(0.753)
More Information | Similar Motifs Found
motif file (matrix)
22 * A C G T C T G A G A C T A T G C C T G A G T C A G T A C A C T G C G A T C T G A 1e-7-1.674e+011.01%0.14%52.7bp (57.8bp)PB0084.1_Tcf7l2_1/Jaspar(0.682)
More Information | Similar Motifs Found
motif file (matrix)
23 * C T G A C G T A C T G A A G C T C G T A A G T C G T A C A T G C A C G T C G T A 1e-7-1.672e+011.48%0.32%56.1bp (57.7bp)PH0165.1_Six6_1/Jaspar(0.624)
More Information | Similar Motifs Found
motif file (matrix)
24 * A C T G C G T A A C T G A C T G A C T G A C G T A C T G A G T C C G T A A C T G 1e-5-1.223e+010.31%0.01%53.7bp (41.9bp)KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer(0.651)
More Information | Similar Motifs Found
motif file (matrix)
25 * A C T G A C G T C G T A A C T G A C T G A G C T C G T A A C G T A C G T C T G A A C G T C T G A 1e-4-1.136e+010.31%0.01%58.5bp (42.8bp)PB0187.1_Tcf7_2/Jaspar(0.613)
More Information | Similar Motifs Found
motif file (matrix)
26 * A C G T T A C G C A G T G C T A A C T G G A C T C A G T C T A G A C T G G A C T 1e-4-1.083e+011.09%0.28%47.2bp (53.6bp)RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer(0.577)
More Information | Similar Motifs Found
motif file (matrix)
27 * A C G T A T G C A G C T T A G C G A C T A G T C C A G T A T C G G C A T A T G C 1e-4-9.527e+002.33%1.06%56.0bp (53.8bp)PB0140.1_Irf6_2/Jaspar(0.713)
More Information | Similar Motifs Found
motif file (matrix)
28 * T A C G C G A T T A C G A C T G G A C T C A T G A C T G G C A T C T A G A T C G 1e-3-9.079e+001.17%0.37%49.3bp (58.6bp)ZBTB7C/MA0695.1/Jaspar(0.696)
More Information | Similar Motifs Found
motif file (matrix)
29 * A C G T A G T C A G T C A G T C A C G T A C G T C G T A A C G T A C G T A C G T A G T C A G T C 1e-2-6.599e+000.16%0.01%50.4bp (23.3bp)PB0012.1_Elf3_1/Jaspar(0.668)
More Information | Similar Motifs Found
motif file (matrix)
30 * C T A G C T A G A C T G A C T G A C T G A C T G A C T G A C T G A C T G A C T G A C T G A C T G 1e-2-6.598e+000.23%0.02%58.6bp (45.6bp)PB0097.1_Zfp281_1/Jaspar(0.912)
More Information | Similar Motifs Found
motif file (matrix)
31 * C T G A A C T G A C G T C G T A A G T C C G T A A G T C A G T C 1e-2-5.870e+000.78%0.27%65.2bp (54.7bp)PB0156.1_Plagl1_2/Jaspar(0.672)
More Information | Similar Motifs Found
motif file (matrix)
32 * A G T C A C G T A G T C A G T C C G A T A C G T A G T C A G T C 1e-1-3.837e+001.94%1.24%57.7bp (58.5bp)MF0001.1_ETS_class/Jaspar(0.684)
More Information | Similar Motifs Found
motif file (matrix)