Homer de novo Motif Results (shp2_vs_input_motif/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 136
Total background sequences = 44455
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 A C G T A G T C A C T G G T A C A G T C C G T A A C G T C G T A A C G T A C G T 1e-28-6.535e+016.62%0.00%52.3bp (0.0bp)YY1/MA0095.2/Jaspar(0.737)
More Information | Similar Motifs Found
motif file (matrix)
2 A C G T A C G T A C G T A G T C G T A C C T A G A C G T A C T G C G T A A C G T A C G T A C G T 1e-24-5.547e+016.62%0.01%45.8bp (19.2bp)Gfi1/MA0038.1/Jaspar(0.739)
More Information | Similar Motifs Found
motif file (matrix)
3 A C T G A C G T A G T C A G T C A C G T C G T A G T A C C G T A A C T G A C G T A C T G A C G T 1e-22-5.288e+016.62%0.01%56.3bp (29.7bp)PH0065.1_Hoxc10/Jaspar(0.630)
More Information | Similar Motifs Found
motif file (matrix)
4 A C T G C G T A C G T A C G T A C G T A G C A T A C G T A C T G C G T A C T A G C G T A C G T A 1e-17-4.066e+015.88%0.02%53.8bp (58.1bp)Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer(0.653)
More Information | Similar Motifs Found
motif file (matrix)
5 A G T C C G T A C G T A A C T G A C G T A C T G A C T G C G T A A C G T A C T G A C G T A C G T 1e-15-3.496e+014.41%0.01%71.6bp (76.0bp)NKX2-3/MA0672.1/Jaspar(0.668)
More Information | Similar Motifs Found
motif file (matrix)
6 A G T C C G T A A C G T A C G T A C G T A C G T A G C T A G T C G T C A G A C T A C T G C G A T 1e-13-3.210e+017.35%0.14%55.5bp (59.7bp)NFAT5/MA0606.1/Jaspar(0.756)
More Information | Similar Motifs Found
motif file (matrix)
7 * G T C A A G T C A C G T A C G T C T A G C G T A G T C A C T G A C G T A G T A C 1e-11-2.737e+0110.29%0.70%64.3bp (54.1bp)PH0111.1_Nkx2-2/Jaspar(0.745)
More Information | Similar Motifs Found
motif file (matrix)
8 * C G T A G T C A C G T A C G T A C G T A A G T C A C T G A C G T A C T G C G T A 1e-11-2.574e+014.41%0.03%54.6bp (34.5bp)HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer(0.699)
More Information | Similar Motifs Found
motif file (matrix)
9 * C G T A A T G C C G T A A T G C C G T A C G T A A G T C A G T C A C G T A C T G C T A G A C G T 1e-9-2.207e+012.94%0.01%51.7bp (21.6bp)SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer(0.637)
More Information | Similar Motifs Found
motif file (matrix)
10 * G T C A A G T C A G T C A C G T A C T G C T A G C T A G A C G T C G T A A G T C A G T C C G T A 1e-9-2.130e+018.09%0.58%50.9bp (62.5bp)ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer(0.629)
More Information | Similar Motifs Found
motif file (matrix)
11 * A C T G A G T C A C G T A G T C A G T C A C T G A C G T A C G T A C G T A G T C 1e-6-1.442e+012.21%0.01%57.6bp (33.1bp)POL013.1_MED-1/Jaspar(0.753)
More Information | Similar Motifs Found
motif file (matrix)
12 * A G T C A G T C C G T A A G C T A C T G G T C A A G C T C G T A A C G T A C G T A G T C A G T C 1e-6-1.442e+012.21%0.01%61.4bp (53.7bp)TEAD2/MA1121.1/Jaspar(0.609)
More Information | Similar Motifs Found
motif file (matrix)
13 * A C G T A T G C A G T C G T C A A G C T A C G T A G T C A G T C G T C A A G T C A G C T A G T C 1e-6-1.433e+014.41%0.22%45.2bp (75.8bp)TEAD1(TEAD)/HepG2-TEAD1-ChIP-Seq(Encode)/Homer(0.671)
More Information | Similar Motifs Found
motif file (matrix)
14 * A C T G G A C T A C T G A G T C A C G T C G T A A T C G A G C T C G T A A C T G A T G C C T A G 1e-5-1.348e+012.94%0.06%43.3bp (47.1bp)PB0155.1_Osr2_2/Jaspar(0.682)
More Information | Similar Motifs Found
motif file (matrix)
15 * A G T C A C G T A C T G A C T G A C T G A G T C C G T A C T A G C G T A A C T G G A T C C T A G 1e-5-1.267e+012.21%0.02%40.0bp (42.4bp)ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer(0.780)
More Information | Similar Motifs Found
motif file (matrix)
16 * A G T C C T G A A C G T A C T G C G T A A C T G A C G T T A G C 1e-5-1.213e+019.56%2.06%45.1bp (65.4bp)JUND/MA0491.1/Jaspar(0.798)
More Information | Similar Motifs Found
motif file (matrix)
17 * A C G T A C G T C T A G A G C T G T C A G T C A A C G T C T G A 1e-4-9.490e+0016.18%6.54%55.0bp (58.7bp)PB0187.1_Tcf7_2/Jaspar(0.795)
More Information | Similar Motifs Found
motif file (matrix)
18 * C T G A A T C G C T G A C T G A T A C G C T G A C T G A A T C G C T G A C T A G T A C G C G T A 1e-4-9.338e+008.82%2.33%71.8bp (80.9bp)PB0141.1_Isgf3g_2/Jaspar(0.578)
More Information | Similar Motifs Found
motif file (matrix)
19 * A T C G G C A T G A T C C G A T A C T G A C G T A T G C A C G T A C T G A C G T 1e-3-8.390e+0016.91%7.56%53.8bp (77.7bp)PB0166.1_Sox12_2/Jaspar(0.672)
More Information | Similar Motifs Found
motif file (matrix)
20 * A G C T C G T A A G C T G T C A A G T C A G T C A G T C A G T C A C G T A C T G 1e-3-7.875e+002.94%0.25%48.5bp (64.2bp)ID4/MA0824.1/Jaspar(0.668)
More Information | Similar Motifs Found
motif file (matrix)
21 * A C G T A C T G A C G T A C T G C G T A A C G T A C T G A G T C G T C A A C T G 1e-2-6.803e+001.47%0.04%52.1bp (70.0bp)Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer(0.680)
More Information | Similar Motifs Found
motif file (matrix)
22 * C G T A T C A G C G T A A C T G A G T C A C T G A C T G A C G T 1e-2-6.527e+002.21%0.16%39.5bp (43.9bp)GRHL1/MA0647.1/Jaspar(0.635)
More Information | Similar Motifs Found
motif file (matrix)
23 * A G T C A G T C A G T C G T C A A C T G A G T C C G T A A G T C 1e-2-5.944e+0011.03%4.86%59.2bp (59.5bp)PB0206.1_Zic2_2/Jaspar(0.715)
More Information | Similar Motifs Found
motif file (matrix)
24 * A C G T A C T G A G T C C G T A A G T C C T G A A C T G A C T G A C G T A C T G A G T C A C G T 1e-2-5.810e+000.74%0.00%54.6bp (0.0bp)PB0089.1_Tcfe2a_1/Jaspar(0.752)
More Information | Similar Motifs Found
motif file (matrix)
25 * A G T C C T G A A G C T C T A G A G T C C T G A A G T C C T G A A G T C A C T G A G T C A C T G 1e-2-5.810e+000.74%0.00%0.0bp (0.0bp)NRF1/MA0506.1/Jaspar(0.699)
More Information | Similar Motifs Found
motif file (matrix)
26 * A C T G A C G T A C T G A C G T A C T G A G T C C T G A A C T G C G T A C G A T A C T G A T G C 1e-2-5.331e+001.47%0.08%54.6bp (57.2bp)PB0044.1_Mtf1_1/Jaspar(0.651)
More Information | Similar Motifs Found
motif file (matrix)
27 * G T A C G T A C A T G C A T C G A T C G A C T G A T C G G C T A 1e-2-5.108e+003.68%0.84%54.3bp (60.5bp)MZF1/MA0056.1/Jaspar(0.790)
More Information | Similar Motifs Found
motif file (matrix)
28 * A T G C A C T G A C G T G C A T C T G A G A T C C T A G A C G T 1e-2-4.933e+002.94%0.56%55.9bp (61.4bp)TEF/MA0843.1/Jaspar(0.741)
More Information | Similar Motifs Found
motif file (matrix)
29 * A C G T A G T C A C G T A G C T A C G T A T G C G C A T A C G T A C G T A G T C 1e-2-4.824e+007.35%2.99%57.3bp (92.4bp)SOX10/MA0442.2/Jaspar(0.674)
More Information | Similar Motifs Found
motif file (matrix)
30 * A T G C A G T C A G T C A G T C G T A C G T A C G T A C G T A C A T G C T G A C 1e-1-4.410e+007.35%3.19%33.7bp (59.7bp)Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer(0.891)
More Information | Similar Motifs Found
motif file (matrix)
31 * A C T G A C T G A C G T A C T G A G T C A C G T C T A G C G T A A G T C C G T A 1e-1-3.341e+000.74%0.03%61.1bp (43.0bp)Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer(0.861)
More Information | Similar Motifs Found
motif file (matrix)