Homer de novo Motif Results (AR_Motif/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
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More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 4155
Total background sequences = 43853
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 A C T G G T C A T C G A G A C T A T C G A T C G G C T A T G C A G A C T T A C G T C A G C G T A 1e-116-2.692e+021.78%0.02%55.0bp (47.0bp)TEAD3(TEA)/HepG2-TEAD3-ChIP-Seq(Encode)/Homer(0.720)
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motif file (matrix)
2 C G T A A G T C C G T A C G T A C G T A A C G T C G T A A C G T A C G T A C T G 1e-100-2.315e+026.21%1.16%50.7bp (59.1bp)Arid5a/MA0602.1/Jaspar(0.827)
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motif file (matrix)
3 A G T C G A C T C T A G A C G T C G T A A C G T A T C G C G T A A C T G A C T G A C G T C A T G 1e-87-2.014e+021.16%0.01%52.4bp (2.5bp)RUNX3/MA0684.2/Jaspar(0.684)
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motif file (matrix)
4 T C A G G C A T G C T A G T A C G C A T A C G T G A T C G A C T G C A T C G A T T C A G A G C T 1e-81-1.872e+027.37%1.99%50.6bp (60.9bp)FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer(0.713)
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motif file (matrix)
5 A G T C C G T A A C T G G C A T C G T A G C A T C A T G G C A T G C T A G A T C 1e-77-1.777e+0231.45%19.27%52.7bp (68.5bp)PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer(0.781)
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motif file (matrix)
6 T C A G G C A T A G T C G A T C G C A T A C T G G T A C G C T A C T A G G A C T G T C A G C A T 1e-72-1.675e+021.69%0.06%47.9bp (48.2bp)ZBTB26/MA1579.1/Jaspar(0.561)
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motif file (matrix)
7 G T A C A G C T A G T C G T A C A G T C G T C A A C T G A C G T C G A T C T G A C T A G C T A G 1e-70-1.633e+021.30%0.03%53.7bp (62.6bp)PB0195.1_Zbtb3_2/Jaspar(0.622)
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motif file (matrix)
8 A C T G C T A G C G T A G T C A A C T G C T A G C G T A A C G T A G T C C G T A C T A G A C T G 1e-67-1.552e+021.08%0.01%42.4bp (31.4bp)RHOXF1/MA0719.1/Jaspar(0.659)
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motif file (matrix)
9 A G C T G A C T C G A T T G C A G A C T C G A T C T G A A T C G 1e-66-1.541e+0218.52%9.67%55.0bp (61.9bp)HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer(0.914)
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motif file (matrix)
10 G C A T G C A T T C A G G C A T A C G T A G C T C T G A T A G C 1e-61-1.415e+0247.17%34.63%53.7bp (66.6bp)FOXN3/MA1489.1/Jaspar(0.980)
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motif file (matrix)
11 A C T G C T A G C G T A C G T A C T A G A G T C A C G T A C G T A G T C C T A G A C G T A G T C 1e-49-1.151e+021.28%0.06%47.0bp (61.3bp)Nr2e3/MA0164.1/Jaspar(0.712)
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motif file (matrix)
12 C T A G T C A G A C G T C T A G G A T C G A T C G A T C A G T C A C G T A G T C C A G T A C T G 1e-46-1.079e+021.28%0.07%51.1bp (62.2bp)ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer(0.630)
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motif file (matrix)
13 G T A C G T A C C G T A A G T C A G C T A C G T C T A G G T C A C T A G C A T G C T G A C T A G 1e-41-9.595e+011.04%0.05%51.9bp (57.4bp)NKX2-3/MA0672.1/Jaspar(0.760)
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motif file (matrix)
14 C G T A G T C A A G T C A G T C A G T C A C T G G T C A A C T G A C G T C T A G 1e-41-9.493e+010.51%0.00%42.7bp (2.5bp)Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer(0.649)
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motif file (matrix)
15 A C T G C G T A A C T G A G T C A C G T A G T C A C G T A C T G C G T A C T A G C G T A C G T A 1e-38-8.971e+010.60%0.01%53.3bp (35.8bp)STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer(0.642)
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motif file (matrix)
16 G A T C C G A T A C T G T A C G A G T C C G T A C T A G T A C G 1e-35-8.224e+0127.26%19.22%55.1bp (64.6bp)NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer(0.912)
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motif file (matrix)
17 A C T G A G T C A C G T A C G T A G T C A G T C C G T A A C T G C G T A A C T G 1e-32-7.488e+011.25%0.13%44.7bp (55.7bp)ZBTB26/MA1579.1/Jaspar(0.698)
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motif file (matrix)
18 G T A C A C G T A C T G A G T C C G T A G T A C A C G T C T A G C G T A A C G T A T G C C T G A 1e-23-5.513e+010.41%0.01%55.4bp (33.2bp)PB0091.1_Zbtb3_1/Jaspar(0.581)
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motif file (matrix)
19 G A C T T C G A A G T C C G T A G T A C C G T A A G T C G T C A G T C A A G T C C G T A A G T C 1e-17-4.007e+012.79%1.12%54.5bp (88.6bp)MTF1/MA0863.1/Jaspar(0.665)
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motif file (matrix)
20 A C G T C G T A A C T G A C T G A G T C A C G T C G T A A G T C 1e-17-3.927e+011.30%0.31%50.8bp (68.8bp)PB0154.1_Osr1_2/Jaspar(0.706)
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motif file (matrix)
21 A T C G A T G C G T A C A T C G A T G C A G T C C A T G A T G C A G T C T A C G 1e-14-3.262e+011.59%0.52%53.7bp (49.0bp)Ascl2(bHLH)/ESC-Ascl2-ChIP-Seq(GSE97712)/Homer(0.746)
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motif file (matrix)
22 A C G T A T G C T C A G C T G A G T A C A G C T A G T C A C T G 1e-13-3.175e+011.64%0.55%49.9bp (60.7bp)VDR/MA0693.2/Jaspar(0.595)
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motif file (matrix)
23 A C T G A C T G A G T C G T C A A C T G A C G T A G T C A C G T 1e-13-3.171e+011.81%0.65%52.6bp (64.5bp)Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer(0.662)
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motif file (matrix)
24 A C G T A C T G A C T G A G T C A C G T A C G T A C T G A T C G A G T C A C G T A T C G A C T G 1e-12-2.792e+010.22%0.01%52.9bp (14.3bp)Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer(0.763)
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motif file (matrix)
25 * A G C T T C A G A G T C C T A G G A C T C A T G A G T C C T A G 1e-9-2.297e+013.03%1.63%52.8bp (78.3bp)Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer(0.782)
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motif file (matrix)
26 * T G C A A T C G C T G A T A C G C T G A T A C G C T G A T A C G C G T A T A C G C G T A A T C G 1e-6-1.513e+014.05%2.69%49.7bp (63.9bp)PRDM1/MA0508.3/Jaspar(0.669)
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motif file (matrix)
27 * T G C A G A T C G A T C C T G A G A T C A G T C C G T A G A T C G A T C C G T A G A T C G A T C 1e-6-1.438e+010.55%0.16%60.3bp (79.4bp)ZBTB7C/MA0695.1/Jaspar(0.611)
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motif file (matrix)
28 * C T A G T A C G A C T G C T A G A C T G A C T G A C T G A C T G T A C G A C T G C T A G A C T G 1e-1-3.804e+005.66%4.96%51.4bp (53.9bp)PB0097.1_Zfp281_1/Jaspar(0.913)
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motif file (matrix)